RNA–Protein interactions for RNA: ENST00000571947.5

TRAPPC1-204, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 306 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-204ENST00000571947 SH3D19Q5HYK7 790 aa6.9□□□□□ -1.3
TRAPPC1-204ENST00000571947 ZNF658Q5TYW1 1059 aaPredicted RBP6.9□□□□□ -1.3
TRAPPC1-204ENST00000571947 KRT79Q5XKE5 535 aa6.9□□□□□ -1.3
TRAPPC1-204ENST00000571947 DPY19L2Q6NUT2 758 aa6.9□□□□□ -1.3
TRAPPC1-204ENST00000571947 USP50Q70EL3 339 aaPredicted RBP6.9□□□□□ -1.3
TRAPPC1-204ENST00000571947 FCHSD1Q86WN1 690 aa6.9□□□□□ -1.3
TRAPPC1-204ENST00000571947 MCF2L2Q86YR7 1114 aa6.9□□□□□ -1.3
TRAPPC1-204ENST00000571947 SULF1Q8IWU6 871 aa6.9□□□□□ -1.3
TRAPPC1-204ENST00000571947 ETNPPLQ8TBG4 499 aa6.9□□□□□ -1.3
TRAPPC1-204ENST00000571947 SNX29Q8TEQ0 813 aa6.9□□□□□ -1.3
TRAPPC1-204ENST00000571947 ZC3H15Q8WU90 426 aaKnown RBP6.9□□□□□ -1.3
TRAPPC1-204ENST00000571947 CLEC4DQ8WXI8 215 aa6.9□□□□□ -1.3
TRAPPC1-204ENST00000571947 CCDC47Q96A33 483 aaKnown RBP6.9□□□□□ -1.3
TRAPPC1-204ENST00000571947 LENG9Q96B70 501 aa6.9□□□□□ -1.3
TRAPPC1-204ENST00000571947 CDK5RAP3Q96JB5 506 aa6.9□□□□□ -1.3
TRAPPC1-204ENST00000571947 AGBL1Q96MI9 1066 aa6.9□□□□□ -1.3
TRAPPC1-204ENST00000571947 FAM20AQ96MK3 541 aa6.9□□□□□ -1.3
TRAPPC1-204ENST00000571947 PLIN2Q99541 437 aa6.9□□□□□ -1.3
TRAPPC1-204ENST00000571947 NUDT12Q9BQG2 462 aa6.9□□□□□ -1.3
TRAPPC1-204ENST00000571947 GTPBP4Q9BZE4 634 aaKnown RBP6.9□□□□□ -1.3
TRAPPC1-204ENST00000571947 BLZF1Q9H2G9 400 aa6.9□□□□□ -1.3
TRAPPC1-204ENST00000571947 BLOC1S4Q9NUP1 217 aa6.9□□□□□ -1.3
TRAPPC1-204ENST00000571947 MAP3K20Q9NYL2 800 aaKnown RBP6.9□□□□□ -1.3
TRAPPC1-204ENST00000571947 ADAMTS5Q9UNA0 930 aa6.9□□□□□ -1.3
TRAPPC1-204ENST00000571947 FZD1Q9UP38 647 aa6.9□□□□□ -1.3
TRAPPC1-204ENST00000571947 ZKSCAN5Q9Y2L8 839 aa6.9□□□□□ -1.3
TRAPPC1-204ENST00000571947 RABGAP1Q9Y3P9 1069 aa6.9□□□□□ -1.3
TRAPPC1-204ENST00000571947 AFG3L2Q9Y4W6 797 aa6.9□□□□□ -1.3
TRAPPC1-204ENST00000571947 STK24Q9Y6E0 443 aa6.9□□□□□ -1.3
TRAPPC1-204ENST00000571947 SNCAIPQ9Y6H5 919 aa6.9□□□□□ -1.3
TRAPPC1-204ENST00000571947 ZHX2Q9Y6X8 837 aa6.9□□□□□ -1.3
TRAPPC1-204ENST00000571947 MYPNQ86TC9 1320 aa6.9□□□□□ -1.3
TRAPPC1-204ENST00000571947 KDM3AQ9Y4C1 1321 aa6.9□□□□□ -1.3
TRAPPC1-204ENST00000571947 ADM5C9JUS6 153 aa6.89□□□□□ -1.31
TRAPPC1-204ENST00000571947 FAM86B1E9PN63 330 aa6.89□□□□□ -1.31
TRAPPC1-204ENST00000571947 MSH4O15457 936 aa6.89□□□□□ -1.31
TRAPPC1-204ENST00000571947 RHOBTB3O94955 611 aa6.89□□□□□ -1.31
TRAPPC1-204ENST00000571947 FAM86B2P0C5J1 330 aa6.89□□□□□ -1.31
TRAPPC1-204ENST00000571947 ALAS1P13196 640 aa6.89□□□□□ -1.31
TRAPPC1-204ENST00000571947 CD44P16070 742 aaKnown RBP6.89□□□□□ -1.31
TRAPPC1-204ENST00000571947 HOXA7P31268 230 aaPredicted RBP6.89□□□□□ -1.31
TRAPPC1-204ENST00000571947 EPHX2P34913 555 aa6.89□□□□□ -1.31
TRAPPC1-204ENST00000571947 OAZ1P54368 228 aa6.89□□□□□ -1.31
TRAPPC1-204ENST00000571947 HMGCS2P54868 508 aa6.89□□□□□ -1.31
TRAPPC1-204ENST00000571947 FANCCQ00597 558 aa6.89□□□□□ -1.31
TRAPPC1-204ENST00000571947 FMR1Q06787 632 aaKnown RBP eCLIP6.89□□□□□ -1.31
TRAPPC1-204ENST00000571947 KMT5BQ4FZB7 885 aa6.89□□□□□ -1.31
TRAPPC1-204ENST00000571947 PRR16Q569H4 304 aa6.89□□□□□ -1.31
TRAPPC1-204ENST00000571947 SPATA1Q5VX52 437 aa6.89□□□□□ -1.31
TRAPPC1-204ENST00000571947 CNNM4Q6P4Q7 775 aa6.89□□□□□ -1.31
TRAPPC1-204ENST00000571947 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.89□□□□□ -1.31
TRAPPC1-204ENST00000571947 SV2BQ7L1I2 683 aa6.89□□□□□ -1.31
TRAPPC1-204ENST00000571947 DRC7Q8IY82 874 aa6.89□□□□□ -1.31
TRAPPC1-204ENST00000571947 CPXCR1Q8N123 301 aa6.89□□□□□ -1.31
TRAPPC1-204ENST00000571947 SPC24Q8NBT2 197 aa6.89□□□□□ -1.31
TRAPPC1-204ENST00000571947 REPS2Q8NFH8 660 aa6.89□□□□□ -1.31
TRAPPC1-204ENST00000571947 RBM46Q8TBY0 533 aaKnown RBP6.89□□□□□ -1.31
TRAPPC1-204ENST00000571947 LARP4BQ92615 738 aaKnown RBP6.89□□□□□ -1.31
TRAPPC1-204ENST00000571947 RAD54LQ92698 747 aa6.89□□□□□ -1.31
TRAPPC1-204ENST00000571947 MED15Q96RN5 788 aa6.89□□□□□ -1.31
TRAPPC1-204ENST00000571947 TRIM9Q9C026 710 aa6.89□□□□□ -1.31
TRAPPC1-204ENST00000571947 LRRC27Q9C0I9 530 aa6.89□□□□□ -1.31
TRAPPC1-204ENST00000571947 NT5C3AQ9H0P0 336 aa6.89□□□□□ -1.31
TRAPPC1-204ENST00000571947 RAVER2Q9HCJ3 691 aaKnown RBP6.89□□□□□ -1.31
TRAPPC1-204ENST00000571947 FANCLQ9NW38 375 aa6.89□□□□□ -1.31
TRAPPC1-204ENST00000571947 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.89□□□□□ -1.31
TRAPPC1-204ENST00000571947 TMOD4Q9NZQ9 345 aa6.89□□□□□ -1.31
TRAPPC1-204ENST00000571947 IFNKQ9P0W0 207 aa6.89□□□□□ -1.31
TRAPPC1-204ENST00000571947 CTDP1Q9Y5B0 961 aaPredicted RBP6.89□□□□□ -1.31
TRAPPC1-204ENST00000571947 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.89□□□□□ -1.31
TRAPPC1-204ENST00000571947 FRMPD4Q14CM0 1322 aa6.89□□□□□ -1.31
TRAPPC1-204ENST00000571947 RPTORQ8N122 1335 aa6.89□□□□□ -1.31
TRAPPC1-204ENST00000571947 SYNRGQ9UMZ2 1314 aa6.88□□□□□ -1.31
TRAPPC1-204ENST00000571947 PVALEFA0A1B0GWK0 134 aa6.88□□□□□ -1.31
TRAPPC1-204ENST00000571947 GLTPD2A6NH11 291 aa6.88□□□□□ -1.31
TRAPPC1-204ENST00000571947 MYMKA6NI61 221 aa6.88□□□□□ -1.31
TRAPPC1-204ENST00000571947 VWA5AO00534 786 aa6.88□□□□□ -1.31
TRAPPC1-204ENST00000571947 NFIBO00712 420 aa6.88□□□□□ -1.31
TRAPPC1-204ENST00000571947 CBFA2T2O43439 604 aa6.88□□□□□ -1.31
TRAPPC1-204ENST00000571947 PPP1R12BO60237 982 aaPredicted RBP6.88□□□□□ -1.31
TRAPPC1-204ENST00000571947 GRIN3BO60391 1043 aa6.88□□□□□ -1.31
TRAPPC1-204ENST00000571947 ZNF18P17022 549 aa6.88□□□□□ -1.31
TRAPPC1-204ENST00000571947 MSNP26038 577 aaKnown RBP6.88□□□□□ -1.31
TRAPPC1-204ENST00000571947 NF2P35240 595 aa6.88□□□□□ -1.31
TRAPPC1-204ENST00000571947 CCT6AP40227 531 aaKnown RBP6.88□□□□□ -1.31
TRAPPC1-204ENST00000571947 PPP1R2P41236 205 aa6.88□□□□□ -1.31
TRAPPC1-204ENST00000571947 IREB2P48200 963 aaKnown RBP6.88□□□□□ -1.31
TRAPPC1-204ENST00000571947 SPIRE1Q08AE8 756 aa6.88□□□□□ -1.31
TRAPPC1-204ENST00000571947 PRKG1Q13976 671 aa6.88□□□□□ -1.31
TRAPPC1-204ENST00000571947 VGLL4Q14135 290 aa6.88□□□□□ -1.31
TRAPPC1-204ENST00000571947 MCM6Q14566 821 aa6.88□□□□□ -1.31
TRAPPC1-204ENST00000571947 COG2Q14746 738 aa6.88□□□□□ -1.31
TRAPPC1-204ENST00000571947 GPR162Q16538 588 aa6.88□□□□□ -1.31
TRAPPC1-204ENST00000571947 ECM1Q16610 540 aa6.88□□□□□ -1.31
TRAPPC1-204ENST00000571947 MUM1L1Q5H9M0 696 aa6.88□□□□□ -1.31
TRAPPC1-204ENST00000571947 CATSPERGQ6ZRH7 1159 aa6.88□□□□□ -1.31
TRAPPC1-204ENST00000571947 ILDR2Q71H61 639 aa6.88□□□□□ -1.31
TRAPPC1-204ENST00000571947 NIPA1Q7RTP0 329 aa6.88□□□□□ -1.31
TRAPPC1-204ENST00000571947 KRT26Q7Z3Y9 468 aa6.88□□□□□ -1.31
TRAPPC1-204ENST00000571947 KCNK18Q7Z418 384 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms