RNA–Protein interactions for RNA: ENST00000571409.1

CTDNEP1-206, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-206ENST00000571409 CMTR1Q8N1G2 835 aaKnown RBP35.07■■■■□ 3.2
CTDNEP1-206ENST00000571409 AFG1LQ8WV93 481 aa35.07■■■■□ 3.2
CTDNEP1-206ENST00000571409 SCN10AQ9Y5Y9 1956 aa35.07■■■■□ 3.2
CTDNEP1-206ENST00000571409 VSIG10LQ86VR7 867 aa35.06■■■■□ 3.2
CTDNEP1-206ENST00000571409 SGMS1Q86VZ5 419 aa35.06■■■■□ 3.2
CTDNEP1-206ENST00000571409 RASEFQ8IZ41 740 aa35.06■■■■□ 3.2
CTDNEP1-206ENST00000571409 IL31RAQ8NI17 732 aa35.06■■■■□ 3.2
CTDNEP1-206ENST00000571409 NEFLP07196 543 aa35.05■■■■□ 3.2
CTDNEP1-206ENST00000571409 MMP3P08254 477 aa35.05■■■■□ 3.2
CTDNEP1-206ENST00000571409 NBPF20Q3BBV1 942 aa35.05■■■■□ 3.2
CTDNEP1-206ENST00000571409 ADCK5Q3MIX3 580 aa35.05■■■■□ 3.2
CTDNEP1-206ENST00000571409 TSGA10IPQ3SY00 556 aa35.05■■■■□ 3.2
CTDNEP1-206ENST00000571409 TRMT13Q9NUP7 481 aaKnown RBP35.05■■■■□ 3.2
CTDNEP1-206ENST00000571409 UMODL1Q5DID0 1318 aa35.05■■■■□ 3.2
CTDNEP1-206ENST00000571409 RGS20O76081 388 aa35.04■■■■□ 3.2
CTDNEP1-206ENST00000571409 CCND2P30279 289 aa35.04■■■■□ 3.2
CTDNEP1-206ENST00000571409 FAM47CQ5HY64 1035 aa35.04■■■■□ 3.2
CTDNEP1-206ENST00000571409 MICU3Q86XE3 530 aa35.04■■■■□ 3.2
CTDNEP1-206ENST00000571409 PPP1R13LQ8WUF5 828 aa35.04■■■■□ 3.2
CTDNEP1-206ENST00000571409 BUD13Q9BRD0 619 aaKnown RBP eCLIP35.04■■■■□ 3.2
CTDNEP1-206ENST00000571409 NOC4LQ9BVI4 516 aaKnown RBP35.04■■■■□ 3.2
CTDNEP1-206ENST00000571409 EXOSC10Q01780 885 aaKnown RBP35.03■■■■□ 3.2
CTDNEP1-206ENST00000571409 FANCBQ8NB91 859 aa35.03■■■■□ 3.2
CTDNEP1-206ENST00000571409 TCEANC2Q96MN5 208 aa35.03■■■■□ 3.2
CTDNEP1-206ENST00000571409 MTMR10Q9NXD2 777 aa35.03■■■■□ 3.2
CTDNEP1-206ENST00000571409 SUPT20HL2P0C7V6 817 aa35.02■■■■□ 3.2
CTDNEP1-206ENST00000571409 SMAD3P84022 425 aaKnown RBP35.02■■■■□ 3.2
CTDNEP1-206ENST00000571409 KRT32Q14532 448 aa35.02■■■■□ 3.2
CTDNEP1-206ENST00000571409 FAM109BQ6ICB4 259 aaPredicted RBP35.02■■■■□ 3.2
CTDNEP1-206ENST00000571409 SYNE3Q6ZMZ3 975 aa35.02■■■■□ 3.2
CTDNEP1-206ENST00000571409 C16orf59Q7L2K0 433 aa35.02■■■■□ 3.2
CTDNEP1-206ENST00000571409 DHX32Q7L7V1 743 aaKnown RBP35.02■■■■□ 3.2
CTDNEP1-206ENST00000571409 ZFP91Q96JP5 570 aaPredicted RBP35.02■■■■□ 3.2
CTDNEP1-206ENST00000571409 TMEM240Q5SV17 173 aa35.01■■■■□ 3.2
CTDNEP1-206ENST00000571409 NFRKBQ6P4R8 1299 aa35.01■■■■□ 3.2
CTDNEP1-206ENST00000571409 KCNV1Q6PIU1 500 aa35.01■■■■□ 3.2
CTDNEP1-206ENST00000571409 TMTC3Q6ZXV5 915 aa35.01■■■■□ 3.2
CTDNEP1-206ENST00000571409 CCDC82Q8N4S0 544 aa35.01■■■■□ 3.2
CTDNEP1-206ENST00000571409 EMID1Q96A84 441 aaPredicted RBP35.01■■■■□ 3.2
CTDNEP1-206ENST00000571409 LAMA2P24043 3122 aaKnown RBP35■■■■□ 3.19
CTDNEP1-206ENST00000571409 ACRP10323 421 aa35■■■■□ 3.19
CTDNEP1-206ENST00000571409 CYP2C9P11712 490 aa35■■■■□ 3.19
CTDNEP1-206ENST00000571409 CCL23P55773 120 aa35■■■■□ 3.19
CTDNEP1-206ENST00000571409 CHMP4BP1P59074 171 aa35■■■■□ 3.19
CTDNEP1-206ENST00000571409 LAMC2Q13753 1193 aa35■■■■□ 3.19
CTDNEP1-206ENST00000571409 APOA5Q6Q788 366 aa35■■■■□ 3.19
CTDNEP1-206ENST00000571409 DHX37Q8IY37 1157 aaKnown RBP35■■■■□ 3.19
CTDNEP1-206ENST00000571409 SMARCC2Q8TAQ2 1214 aa35■■■■□ 3.19
CTDNEP1-206ENST00000571409 CUL5Q93034 780 aa35■■■■□ 3.19
CTDNEP1-206ENST00000571409 MYH7BA7E2Y1 1941 aa35■■■■□ 3.19
CTDNEP1-206ENST00000571409 FRMPD4Q14CM0 1322 aa35■■■■□ 3.19
CTDNEP1-206ENST00000571409 CASTP20810 708 aaKnown RBP34.99■■■■□ 3.19
CTDNEP1-206ENST00000571409 DGKDQ16760 1214 aa34.99■■■■□ 3.19
CTDNEP1-206ENST00000571409 ZNF697Q5TEC3 545 aa34.99■■■■□ 3.19
CTDNEP1-206ENST00000571409 USP17L6PQ6QN14 398 aa34.99■■■■□ 3.19
CTDNEP1-206ENST00000571409 WNT8AQ9H1J5 351 aa34.99■■■■□ 3.19
CTDNEP1-206ENST00000571409 IL23AQ9NPF7 189 aa34.99■■■■□ 3.19
CTDNEP1-206ENST00000571409 hCG_1642624A0A1W2PR95 340 aa34.98■■■■□ 3.19
CTDNEP1-206ENST00000571409 PTPN11Q06124 597 aaPredicted RBP34.98■■■■□ 3.19
CTDNEP1-206ENST00000571409 PSRC1Q6PGN9 363 aaPredicted RBP34.98■■■■□ 3.19
CTDNEP1-206ENST00000571409 ZNF365Q70YC5 407 aa34.97■■■■□ 3.19
CTDNEP1-206ENST00000571409 PPTC7Q8NI37 304 aa34.97■■■■□ 3.19
CTDNEP1-206ENST00000571409 FAM161BQ96MY7 647 aa34.97■■■■□ 3.19
CTDNEP1-206ENST00000571409 BRPF3Q9ULD4 1205 aa34.97■■■■□ 3.19
CTDNEP1-206ENST00000571409 PIK3CDO00329 1044 aa34.96■■■■□ 3.19
CTDNEP1-206ENST00000571409 MEIS2O14770 477 aa34.96■■■■□ 3.19
CTDNEP1-206ENST00000571409 SORBS3O60504 671 aa34.96■■■■□ 3.19
CTDNEP1-206ENST00000571409 GGPS1O95749 300 aa34.96■■■■□ 3.19
CTDNEP1-206ENST00000571409 TGFB3P10600 412 aa34.96■■■■□ 3.19
CTDNEP1-206ENST00000571409 KAT2BQ92831 832 aa34.96■■■■□ 3.19
CTDNEP1-206ENST00000571409 GPKOWQ92917 476 aaPredicted RBP eCLIP34.96■■■■□ 3.19
CTDNEP1-206ENST00000571409 RBM28Q9NW13 759 aaKnown RBP34.96■■■■□ 3.19
CTDNEP1-206ENST00000571409 HMGB1P09429 215 aaKnown RBP34.95■■■■□ 3.19
CTDNEP1-206ENST00000571409 UBA1P22314 1058 aaKnown RBP34.95■■■■□ 3.19
CTDNEP1-206ENST00000571409 MRPS9P82933 396 aaKnown RBP34.95■■■■□ 3.19
CTDNEP1-206ENST00000571409 SP2Q02086 613 aa34.95■■■■□ 3.19
CTDNEP1-206ENST00000571409 CELF3Q5SZQ8 465 aaKnown RBP34.95■■■■□ 3.19
CTDNEP1-206ENST00000571409 MYSM1Q5VVJ2 828 aa34.95■■■■□ 3.19
CTDNEP1-206ENST00000571409 ZBTB43O43298 467 aa34.94■■■■□ 3.18
CTDNEP1-206ENST00000571409 KCNB2Q92953 911 aa34.94■■■■□ 3.18
CTDNEP1-206ENST00000571409 SCLYQ96I15 445 aa34.94■■■■□ 3.18
CTDNEP1-206ENST00000571409 SPATA33Q96N06 139 aa34.94■■■■□ 3.18
CTDNEP1-206ENST00000571409 HSFX4A0A1B0GTS1 333 aaPredicted RBP34.93■■■■□ 3.18
CTDNEP1-206ENST00000571409 HSFX3A0A1B0GWH4 333 aaPredicted RBP34.93■■■■□ 3.18
CTDNEP1-206ENST00000571409 STAM2O75886 525 aa34.93■■■■□ 3.18
CTDNEP1-206ENST00000571409 HSPA4P34932 840 aa34.93■■■■□ 3.18
CTDNEP1-206ENST00000571409 GNPTABQ3T906 1256 aa34.93■■■■□ 3.18
CTDNEP1-206ENST00000571409 PSTPIP2Q9H939 334 aa34.93■■■■□ 3.18
CTDNEP1-206ENST00000571409 RTEL1Q9NZ71 1219 aa34.93■■■■□ 3.18
CTDNEP1-206ENST00000571409 NOD1Q9Y239 953 aa34.93■■■■□ 3.18
CTDNEP1-206ENST00000571409 CNTNAP5Q8WYK1 1306 aa34.92■■■■□ 3.18
CTDNEP1-206ENST00000571409 ZNF286BP0CG31 522 aa34.92■■■■□ 3.18
CTDNEP1-206ENST00000571409 RTN1Q16799 776 aa34.92■■■■□ 3.18
CTDNEP1-206ENST00000571409 HSDL1Q3SXM5 330 aa34.92■■■■□ 3.18
CTDNEP1-206ENST00000571409 RASIP1Q5U651 963 aa34.92■■■■□ 3.18
CTDNEP1-206ENST00000571409 INPP4AQ96PE3 977 aaPredicted RBP34.92■■■■□ 3.18
CTDNEP1-206ENST00000571409 KATNAL1Q9BW62 490 aa34.92■■■■□ 3.18
CTDNEP1-206ENST00000571409 KLF18A0A0U1RQI7 1052 aa34.91■■■■□ 3.18
CTDNEP1-206ENST00000571409 FGBP02675 491 aa34.91■■■■□ 3.18
CTDNEP1-206ENST00000571409 CPA1P15085 419 aa34.91■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms