RNA–Protein interactions for RNA: ENST00000571252.2

PCDHGA4-201, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA4, Length 4,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-201ENST00000571252 USH1GQ495M9 461 aa12.2□□□□□ -0.46
PCDHGA4-201ENST00000571252 MFSD14BQ5SR56 506 aa12.2□□□□□ -0.46
PCDHGA4-201ENST00000571252 RASGRP2Q7LDG7 609 aa12.2□□□□□ -0.46
PCDHGA4-201ENST00000571252 COG1Q8WTW3 980 aa12.2□□□□□ -0.46
PCDHGA4-201ENST00000571252 ADAMTS1Q9UHI8 967 aa12.2□□□□□ -0.46
PCDHGA4-201ENST00000571252 COL4A3BPQ9Y5P4 624 aa12.2□□□□□ -0.46
PCDHGA4-201ENST00000571252 FAM205CA6NFA0 338 aa12.19□□□□□ -0.46
PCDHGA4-201ENST00000571252 NR2F2P24468 414 aa12.19□□□□□ -0.46
PCDHGA4-201ENST00000571252 IMPG2Q9BZV3 1241 aa12.19□□□□□ -0.46
PCDHGA4-201ENST00000571252 SENP2Q9HC62 589 aa12.19□□□□□ -0.46
PCDHGA4-201ENST00000571252 METTL14Q9HCE5 456 aaKnown RBP12.19□□□□□ -0.46
PCDHGA4-201ENST00000571252 HOMER3Q9NSC5 361 aa12.19□□□□□ -0.46
PCDHGA4-201ENST00000571252 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.19□□□□□ -0.46
PCDHGA4-201ENST00000571252 FHOD1Q9Y613 1164 aa12.19□□□□□ -0.46
PCDHGA4-201ENST00000571252 ATP1A1P05023 1023 aaKnown RBP12.19□□□□□ -0.46
PCDHGA4-201ENST00000571252 CRKLP46109 303 aaKnown RBP12.19□□□□□ -0.46
PCDHGA4-201ENST00000571252 MXRA7P84157 204 aa12.19□□□□□ -0.46
PCDHGA4-201ENST00000571252 KIFAP3Q92845 792 aa12.19□□□□□ -0.46
PCDHGA4-201ENST00000571252 SYNCQ9H7C4 482 aa12.19□□□□□ -0.46
PCDHGA4-201ENST00000571252 BZW2Q9Y6E2 419 aaKnown RBP12.19□□□□□ -0.46
PCDHGA4-201ENST00000571252 FAM169AQ9Y6X4 670 aa12.19□□□□□ -0.46
PCDHGA4-201ENST00000571252 LOC102724428A0A0B4J2F2 783 aa12.19□□□□□ -0.46
PCDHGA4-201ENST00000571252 SIK1P57059 783 aa12.19□□□□□ -0.46
PCDHGA4-201ENST00000571252 TRIM28Q13263 835 aaKnown RBP12.19□□□□□ -0.46
PCDHGA4-201ENST00000571252 PRR16Q569H4 304 aa12.19□□□□□ -0.46
PCDHGA4-201ENST00000571252 ANKRD42Q8N9B4 389 aa12.19□□□□□ -0.46
PCDHGA4-201ENST00000571252 FAM133AQ8N9E0 248 aa12.19□□□□□ -0.46
PCDHGA4-201ENST00000571252 GJA10Q969M2 543 aa12.19□□□□□ -0.46
PCDHGA4-201ENST00000571252 PARP2Q9UGN5 583 aa12.19□□□□□ -0.46
PCDHGA4-201ENST00000571252 RIPOR2Q9Y4F9 1068 aa12.19□□□□□ -0.46
PCDHGA4-201ENST00000571252 CHD2O14647 1828 aaKnown RBP12.19□□□□□ -0.46
PCDHGA4-201ENST00000571252 CCDC169A6NNP5 214 aa12.19□□□□□ -0.46
PCDHGA4-201ENST00000571252 PGRMC1O00264 195 aaKnown RBP12.19□□□□□ -0.46
PCDHGA4-201ENST00000571252 CYP2J2P51589 502 aa12.19□□□□□ -0.46
PCDHGA4-201ENST00000571252 FAM98CQ17RN3 349 aaKnown RBP12.19□□□□□ -0.46
PCDHGA4-201ENST00000571252 SUSD4Q5VX71 490 aa12.19□□□□□ -0.46
PCDHGA4-201ENST00000571252 ICE2Q659A1 982 aa12.19□□□□□ -0.46
PCDHGA4-201ENST00000571252 SRLQ86TD4 932 aa12.19□□□□□ -0.46
PCDHGA4-201ENST00000571252 MRRFQ96E11 262 aaKnown RBP12.19□□□□□ -0.46
PCDHGA4-201ENST00000571252 TCHPQ9BT92 498 aa12.19□□□□□ -0.46
PCDHGA4-201ENST00000571252 BRIP1Q9BX63 1249 aa12.19□□□□□ -0.46
PCDHGA4-201ENST00000571252 ZNF804BA4D1E1 1349 aa12.18□□□□□ -0.46
PCDHGA4-201ENST00000571252 TBC1D8O95759 1140 aa12.18□□□□□ -0.46
PCDHGA4-201ENST00000571252 PFKFB3Q16875 520 aaPredicted RBP12.18□□□□□ -0.46
PCDHGA4-201ENST00000571252 TPH2Q8IWU9 490 aa12.18□□□□□ -0.46
PCDHGA4-201ENST00000571252 DYNLL2Q96FJ2 89 aa12.18□□□□□ -0.46
PCDHGA4-201ENST00000571252 STK24Q9Y6E0 443 aa12.18□□□□□ -0.46
PCDHGA4-201ENST00000571252 SLIT3O75094 1523 aa12.18□□□□□ -0.46
PCDHGA4-201ENST00000571252 TRIM66O15016 1216 aa12.18□□□□□ -0.46
PCDHGA4-201ENST00000571252 ATP2C1P98194 919 aaPredicted RBP12.18□□□□□ -0.46
PCDHGA4-201ENST00000571252 GRIN1Q05586 938 aa12.18□□□□□ -0.46
PCDHGA4-201ENST00000571252 WHAMMQ8TF30 809 aa12.18□□□□□ -0.46
PCDHGA4-201ENST00000571252 MLXIPQ9HAP2 919 aa12.18□□□□□ -0.46
PCDHGA4-201ENST00000571252 USP17L2Q6R6M4 530 aa12.18□□□□□ -0.46
PCDHGA4-201ENST00000571252 DGKHQ86XP1 1220 aa12.18□□□□□ -0.46
PCDHGA4-201ENST00000571252 TBC1D22AQ8WUA7 517 aa12.18□□□□□ -0.46
PCDHGA4-201ENST00000571252 LIMA1Q9UHB6 759 aaKnown RBP12.18□□□□□ -0.46
PCDHGA4-201ENST00000571252 MED1Q15648 1581 aaPredicted RBP12.18□□□□□ -0.46
PCDHGA4-201ENST00000571252 USP17L3A6NCW0 530 aa12.18□□□□□ -0.46
PCDHGA4-201ENST00000571252 USP17L4A6NCW7 530 aa12.18□□□□□ -0.46
PCDHGA4-201ENST00000571252 SERPING1P05155 500 aa12.18□□□□□ -0.46
PCDHGA4-201ENST00000571252 CLTAP09496 248 aa12.18□□□□□ -0.46
PCDHGA4-201ENST00000571252 BTDP43251 543 aa12.18□□□□□ -0.46
PCDHGA4-201ENST00000571252 CACNB1Q02641 598 aaPredicted RBP12.18□□□□□ -0.46
PCDHGA4-201ENST00000571252 LRRC63Q05C16 580 aa12.18□□□□□ -0.46
PCDHGA4-201ENST00000571252 NCAPHQ15003 741 aa12.18□□□□□ -0.46
PCDHGA4-201ENST00000571252 USP17L1Q7RTZ2 530 aa12.18□□□□□ -0.46
PCDHGA4-201ENST00000571252 RBM17Q96I25 401 aaKnown RBP12.18□□□□□ -0.46
PCDHGA4-201ENST00000571252 PP2D1A8MPX8 630 aa12.17□□□□□ -0.46
PCDHGA4-201ENST00000571252 PCK1P35558 622 aa12.17□□□□□ -0.46
PCDHGA4-201ENST00000571252 CYP4A11Q02928 519 aa12.17□□□□□ -0.46
PCDHGA4-201ENST00000571252 PIGSQ96S52 555 aa12.17□□□□□ -0.46
PCDHGA4-201ENST00000571252 ATP8A1Q9Y2Q0 1164 aa12.17□□□□□ -0.46
PCDHGA4-201ENST00000571252 A0A1W2PQC6 194 aa12.17□□□□□ -0.46
PCDHGA4-201ENST00000571252 GAS8O95995 478 aa12.17□□□□□ -0.46
PCDHGA4-201ENST00000571252 CFBP00751 764 aa12.17□□□□□ -0.46
PCDHGA4-201ENST00000571252 IFNAR2P48551 515 aa12.17□□□□□ -0.46
PCDHGA4-201ENST00000571252 BIRC3Q13489 604 aa12.17□□□□□ -0.46
PCDHGA4-201ENST00000571252 PTPAQ15257 358 aa12.17□□□□□ -0.46
PCDHGA4-201ENST00000571252 DPP8Q6V1X1 898 aaPredicted RBP12.17□□□□□ -0.46
PCDHGA4-201ENST00000571252 MMS22LQ6ZRQ5 1243 aa12.17□□□□□ -0.46
PCDHGA4-201ENST00000571252 NMT2O60551 498 aa12.17□□□□□ -0.46
PCDHGA4-201ENST00000571252 STX2P32856 288 aa12.17□□□□□ -0.46
PCDHGA4-201ENST00000571252 MECOMQ03112 1051 aa12.17□□□□□ -0.46
PCDHGA4-201ENST00000571252 MMS19Q96T76 1030 aa12.17□□□□□ -0.46
PCDHGA4-201ENST00000571252 SUGCTQ9HAC7 445 aa12.17□□□□□ -0.46
PCDHGA4-201ENST00000571252 CDHR2Q9BYE9 1310 aa12.17□□□□□ -0.46
PCDHGA4-201ENST00000571252 DHX9Q08211 1270 aaKnown RBP12.17□□□□□ -0.46
PCDHGA4-201ENST00000571252 PABPC4Q13310 644 aaKnown RBP eCLIP12.17□□□□□ -0.46
PCDHGA4-201ENST00000571252 KRT26Q7Z3Y9 468 aa12.17□□□□□ -0.46
PCDHGA4-201ENST00000571252 VTI1AQ96AJ9 217 aa12.17□□□□□ -0.46
PCDHGA4-201ENST00000571252 STK38LQ9Y2H1 464 aa12.17□□□□□ -0.46
PCDHGA4-201ENST00000571252 KDM3BQ7LBC6 1761 aa12.16□□□□□ -0.46
PCDHGA4-201ENST00000571252 GYPCP04921 128 aa12.16□□□□□ -0.46
PCDHGA4-201ENST00000571252 CYP19A1P11511 503 aaPredicted RBP12.16□□□□□ -0.46
PCDHGA4-201ENST00000571252 NFRKBQ6P4R8 1299 aa12.16□□□□□ -0.46
PCDHGA4-201ENST00000571252 NOA1Q8NC60 698 aaKnown RBP12.16□□□□□ -0.46
PCDHGA4-201ENST00000571252 COA7Q96BR5 231 aa12.16□□□□□ -0.46
PCDHGA4-201ENST00000571252 SMC6Q96SB8 1091 aa12.16□□□□□ -0.46
PCDHGA4-201ENST00000571252 TACO1Q9BSH4 297 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms