RNA–Protein interactions for RNA: ENST00000571190.1

CIITA-206, Transcript of class II major histocompatibility complex transactivator, humanhuman

Gene CIITA, Length 479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-206ENST00000571190 RGS20O76081 388 aa20.46■□□□□ 0.87
CIITA-206ENST00000571190 CFBP00751 764 aa20.46■□□□□ 0.87
CIITA-206ENST00000571190 BFSP2Q13515 415 aa20.46■□□□□ 0.87
CIITA-206ENST00000571190 PTGISQ16647 500 aa20.46■□□□□ 0.87
CIITA-206ENST00000571190 IFIT1BQ5T764 474 aaKnown RBP20.46■□□□□ 0.87
CIITA-206ENST00000571190 ARHGEF16Q5VV41 709 aa20.46■□□□□ 0.87
CIITA-206ENST00000571190 ATXN2LQ8WWM7 1075 aaKnown RBP20.46■□□□□ 0.87
CIITA-206ENST00000571190 PALM3A6NDB9 673 aaPredicted RBP20.45■□□□□ 0.86
CIITA-206ENST00000571190 KLRF2D3W0D1 207 aa20.45■□□□□ 0.86
CIITA-206ENST00000571190 RFXAPO00287 272 aa20.45■□□□□ 0.86
CIITA-206ENST00000571190 EIF3JO75822 258 aaKnown RBP20.45■□□□□ 0.86
CIITA-206ENST00000571190 CA3P07451 260 aa20.45■□□□□ 0.86
CIITA-206ENST00000571190 TMEM67Q5HYA8 995 aa20.45■□□□□ 0.86
CIITA-206ENST00000571190 EMID1Q96A84 441 aaPredicted RBP20.45■□□□□ 0.86
CIITA-206ENST00000571190 ASB2Q96Q27 587 aa20.45■□□□□ 0.86
CIITA-206ENST00000571190 AMNQ9BXJ7 453 aa20.45■□□□□ 0.86
CIITA-206ENST00000571190 THEGQ9P2T0 379 aa20.45■□□□□ 0.86
CIITA-206ENST00000571190 TAF6LQ9Y6J9 622 aa20.45■□□□□ 0.86
CIITA-206ENST00000571190 EPOPA6NHQ4 379 aa20.44■□□□□ 0.86
CIITA-206ENST00000571190 ACTN1P12814 892 aa20.44■□□□□ 0.86
CIITA-206ENST00000571190 CASTP20810 708 aaKnown RBP20.44■□□□□ 0.86
CIITA-206ENST00000571190 STOX1Q6ZVD7 989 aa20.44■□□□□ 0.86
CIITA-206ENST00000571190 PHOSPHO2Q8TCD6 241 aa20.44■□□□□ 0.86
CIITA-206ENST00000571190 SLC9A7Q96T83 725 aa20.44■□□□□ 0.86
CIITA-206ENST00000571190 PDCD2LQ9BRP1 358 aa20.44■□□□□ 0.86
CIITA-206ENST00000571190 FTOQ9C0B1 505 aaKnown RBP eCLIP20.44■□□□□ 0.86
CIITA-206ENST00000571190 SENP2Q9HC62 589 aa20.44■□□□□ 0.86
CIITA-206ENST00000571190 NOD1Q9Y239 953 aa20.44■□□□□ 0.86
CIITA-206ENST00000571190 SCN10AQ9Y5Y9 1956 aa20.44■□□□□ 0.86
CIITA-206ENST00000571190 HAS3O00219 553 aa20.43■□□□□ 0.86
CIITA-206ENST00000571190 ZBTB5O15062 677 aa20.43■□□□□ 0.86
CIITA-206ENST00000571190 CYP21A2P08686 494 aa20.43■□□□□ 0.86
CIITA-206ENST00000571190 PTH1RQ03431 593 aa20.43■□□□□ 0.86
CIITA-206ENST00000571190 RBL2Q08999 1139 aa20.43■□□□□ 0.86
CIITA-206ENST00000571190 DGKDQ16760 1214 aa20.43■□□□□ 0.86
CIITA-206ENST00000571190 TCTN1Q2MV58 587 aa20.43■□□□□ 0.86
CIITA-206ENST00000571190 TTC22Q5TAA0 569 aa20.43■□□□□ 0.86
CIITA-206ENST00000571190 IL31RAQ8NI17 732 aa20.43■□□□□ 0.86
CIITA-206ENST00000571190 CAGE1Q8TC20 777 aa20.43■□□□□ 0.86
CIITA-206ENST00000571190 AFAP1L1Q8TED9 768 aa20.43■□□□□ 0.86
CIITA-206ENST00000571190 HDAC6Q9UBN7 1215 aa20.43■□□□□ 0.86
CIITA-206ENST00000571190 GTF2IRD1Q9UHL9 959 aa20.43■□□□□ 0.86
CIITA-206ENST00000571190 PCDHA1Q9Y5I3 950 aa20.43■□□□□ 0.86
CIITA-206ENST00000571190 MRVI1Q9Y6F6 885 aa20.43■□□□□ 0.86
CIITA-206ENST00000571190 HOXD8P13378 290 aaPredicted RBP20.42■□□□□ 0.86
CIITA-206ENST00000571190 POU3F3P20264 500 aaPredicted RBP20.42■□□□□ 0.86
CIITA-206ENST00000571190 HOXA13P31271 388 aaPredicted RBP20.42■□□□□ 0.86
CIITA-206ENST00000571190 PSEN2P49810 448 aa20.42■□□□□ 0.86
CIITA-206ENST00000571190 TAP1Q03518 808 aa20.42■□□□□ 0.86
CIITA-206ENST00000571190 HIC1Q14526 733 aa20.42■□□□□ 0.86
CIITA-206ENST00000571190 HERC6Q8IVU3 1022 aa20.42■□□□□ 0.86
CIITA-206ENST00000571190 PPTC7Q8NI37 304 aa20.42■□□□□ 0.86
CIITA-206ENST00000571190 RIOX1Q9H6W3 641 aa20.42■□□□□ 0.86
CIITA-206ENST00000571190 CERS4Q9HA82 394 aa20.42■□□□□ 0.86
CIITA-206ENST00000571190 CYTH3O43739 400 aa20.41■□□□□ 0.86
CIITA-206ENST00000571190 F2P00734 622 aa20.41■□□□□ 0.86
CIITA-206ENST00000571190 ZNF286BP0CG31 522 aa20.41■□□□□ 0.86
CIITA-206ENST00000571190 SELPP16109 830 aa20.41■□□□□ 0.86
CIITA-206ENST00000571190 MRPS5P82675 430 aaKnown RBP20.41■□□□□ 0.86
CIITA-206ENST00000571190 LAMC2Q13753 1193 aa20.41■□□□□ 0.86
CIITA-206ENST00000571190 GRM4Q14833 912 aa20.41■□□□□ 0.86
CIITA-206ENST00000571190 TRIM71Q2Q1W2 868 aaKnown RBP20.41■□□□□ 0.86
CIITA-206ENST00000571190 TRAF7Q6Q0C0 670 aa20.41■□□□□ 0.86
CIITA-206ENST00000571190 SPRED2Q7Z698 418 aa20.41■□□□□ 0.86
CIITA-206ENST00000571190 VSIG10LQ86VR7 867 aa20.41■□□□□ 0.86
CIITA-206ENST00000571190 WNT8BQ93098 351 aa20.41■□□□□ 0.86
CIITA-206ENST00000571190 PIGSQ96S52 555 aa20.41■□□□□ 0.86
CIITA-206ENST00000571190 MAP3K20Q9NYL2 800 aaKnown RBP20.41■□□□□ 0.86
CIITA-206ENST00000571190 MTCH2Q9Y6C9 303 aa20.41■□□□□ 0.86
CIITA-206ENST00000571190 TNFRSF10AO00220 468 aa20.4■□□□□ 0.86
CIITA-206ENST00000571190 NBNO60934 754 aa20.4■□□□□ 0.86
CIITA-206ENST00000571190 BAIAP3O94812 1187 aa20.4■□□□□ 0.86
CIITA-206ENST00000571190 CXCL10P02778 98 aa20.4■□□□□ 0.86
CIITA-206ENST00000571190 CKBP12277 381 aa20.4■□□□□ 0.86
CIITA-206ENST00000571190 MYCLP12524 364 aaPredicted RBP20.4■□□□□ 0.86
CIITA-206ENST00000571190 CHMLP26374 656 aa20.4■□□□□ 0.86
CIITA-206ENST00000571190 ZNF200P98182 395 aaPredicted RBP20.4■□□□□ 0.86
CIITA-206ENST00000571190 SP2Q02086 613 aa20.4■□□□□ 0.86
CIITA-206ENST00000571190 MFSD10Q14728 455 aa20.4■□□□□ 0.86
CIITA-206ENST00000571190 PGM5Q15124 567 aa20.4■□□□□ 0.86
CIITA-206ENST00000571190 MYSM1Q5VVJ2 828 aa20.4■□□□□ 0.86
CIITA-206ENST00000571190 LRRC8DQ7L1W4 858 aa20.4■□□□□ 0.86
CIITA-206ENST00000571190 DHX37Q8IY37 1157 aaKnown RBP20.4■□□□□ 0.86
CIITA-206ENST00000571190 CCDC155Q8N6L0 562 aa20.4■□□□□ 0.86
CIITA-206ENST00000571190 GPKOWQ92917 476 aaPredicted RBP eCLIP20.4■□□□□ 0.86
CIITA-206ENST00000571190 ZFP91Q96JP5 570 aaPredicted RBP20.4■□□□□ 0.86
CIITA-206ENST00000571190 ALG1Q9BT22 464 aa20.4■□□□□ 0.86
CIITA-206ENST00000571190 CHD7Q9P2D1 2997 aa20.4■□□□□ 0.86
CIITA-206ENST00000571190 SORBS3O60504 671 aa20.39■□□□□ 0.85
CIITA-206ENST00000571190 WDR5P61964 334 aaKnown RBP20.39■□□□□ 0.85
CIITA-206ENST00000571190 TROAPQ12815 778 aa20.39■□□□□ 0.85
CIITA-206ENST00000571190 KIAA0753Q2KHM9 967 aa20.39■□□□□ 0.85
CIITA-206ENST00000571190 HSDL1Q3SXM5 330 aa20.39■□□□□ 0.85
CIITA-206ENST00000571190 CELF3Q5SZQ8 465 aaKnown RBP20.39■□□□□ 0.85
CIITA-206ENST00000571190 KRT40Q6A162 431 aa20.39■□□□□ 0.85
CIITA-206ENST00000571190 TMCO2Q7Z6W1 182 aaPredicted RBP20.39■□□□□ 0.85
CIITA-206ENST00000571190 HOMER1Q86YM7 354 aa20.39■□□□□ 0.85
CIITA-206ENST00000571190 MICALL1Q8N3F8 863 aa20.39■□□□□ 0.85
CIITA-206ENST00000571190 SAMD3Q8N6K7 520 aa20.39■□□□□ 0.85
CIITA-206ENST00000571190 C7orf31Q8N865 590 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms