RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 TBC1D5Q92609 795 aa14.36□□□□□ -0.11
CTDNEP1-205ENST00000570828 TAAR1Q96RJ0 339 aa14.36□□□□□ -0.11
CTDNEP1-205ENST00000570828 ESYT1Q9BSJ8 1104 aa14.36□□□□□ -0.11
CTDNEP1-205ENST00000570828 PPP1R12CQ9BZL4 782 aa14.36□□□□□ -0.11
CTDNEP1-205ENST00000570828 GPHNQ9NQX3 736 aaPredicted RBP14.36□□□□□ -0.11
CTDNEP1-205ENST00000570828 COL20A1Q9P218 1284 aa14.36□□□□□ -0.11
CTDNEP1-205ENST00000570828 CD4P01730 458 aa14.35□□□□□ -0.11
CTDNEP1-205ENST00000570828 MYL3P08590 195 aa14.35□□□□□ -0.11
CTDNEP1-205ENST00000570828 TXNP10599 105 aaKnown RBP14.35□□□□□ -0.11
CTDNEP1-205ENST00000570828 EPHB4P54760 987 aa14.35□□□□□ -0.11
CTDNEP1-205ENST00000570828 PPIGQ13427 754 aaKnown RBP eCLIP14.35□□□□□ -0.113e-6■■□□□ 12.9
CTDNEP1-205ENST00000570828 STXBP2Q15833 593 aa14.35□□□□□ -0.11
CTDNEP1-205ENST00000570828 ZNF697Q5TEC3 545 aa14.35□□□□□ -0.11
CTDNEP1-205ENST00000570828 FAM109BQ6ICB4 259 aaPredicted RBP14.35□□□□□ -0.11
CTDNEP1-205ENST00000570828 CASC1Q6TDU7 716 aa14.35□□□□□ -0.11
CTDNEP1-205ENST00000570828 MB21D2Q8IYB1 491 aaPredicted RBP14.35□□□□□ -0.11
CTDNEP1-205ENST00000570828 TMEM199Q8N511 208 aa14.35□□□□□ -0.11
CTDNEP1-205ENST00000570828 MTMR8Q96EF0 704 aa14.35□□□□□ -0.11
CTDNEP1-205ENST00000570828 IWS1Q96ST2 819 aa14.35□□□□□ -0.11
CTDNEP1-205ENST00000570828 SENP2Q9HC62 589 aa14.35□□□□□ -0.11
CTDNEP1-205ENST00000570828 ANO2Q9NQ90 1003 aa14.35□□□□□ -0.11
CTDNEP1-205ENST00000570828 PCDHA1Q9Y5I3 950 aa14.35□□□□□ -0.11
CTDNEP1-205ENST00000570828 COL6A3P12111 3177 aa14.35□□□□□ -0.11
CTDNEP1-205ENST00000570828 GRIN2DO15399 1336 aa14.35□□□□□ -0.11
CTDNEP1-205ENST00000570828 PPP1R11O60927 126 aaPredicted RBP14.34□□□□□ -0.11
CTDNEP1-205ENST00000570828 EIF2AK2P19525 551 aaKnown RBP14.34□□□□□ -0.11
CTDNEP1-205ENST00000570828 ANTXR2P58335 489 aa14.34□□□□□ -0.11
CTDNEP1-205ENST00000570828 SMAD3P84022 425 aaKnown RBP14.34□□□□□ -0.11
CTDNEP1-205ENST00000570828 PURAQ00577 322 aaKnown RBP14.34□□□□□ -0.11
CTDNEP1-205ENST00000570828 TROAPQ12815 778 aa14.34□□□□□ -0.11
CTDNEP1-205ENST00000570828 BMP2KLQ5H9B9 411 aa14.34□□□□□ -0.11
CTDNEP1-205ENST00000570828 SEPT14Q6ZU15 432 aa14.34□□□□□ -0.11
CTDNEP1-205ENST00000570828 COPS5Q92905 334 aa14.34□□□□□ -0.11
CTDNEP1-205ENST00000570828 MTG1Q9BT17 334 aaPredicted RBP14.34□□□□□ -0.11
CTDNEP1-205ENST00000570828 LSG1Q9H089 658 aaKnown RBP14.34□□□□□ -0.11
CTDNEP1-205ENST00000570828 HIPK3Q9H422 1215 aa14.34□□□□□ -0.11
CTDNEP1-205ENST00000570828 PXMP2Q9NR77 195 aa14.34□□□□□ -0.11
CTDNEP1-205ENST00000570828 MTMR10Q9NXD2 777 aa14.34□□□□□ -0.11
CTDNEP1-205ENST00000570828 OPLAHO14841 1288 aa14.33□□□□□ -0.12
CTDNEP1-205ENST00000570828 PRC1O43663 620 aa14.33□□□□□ -0.12
CTDNEP1-205ENST00000570828 B4GALT4O60513 344 aa14.33□□□□□ -0.12
CTDNEP1-205ENST00000570828 KPNA6O60684 536 aa14.33□□□□□ -0.12
CTDNEP1-205ENST00000570828 DDAH1O94760 285 aa14.33□□□□□ -0.12
CTDNEP1-205ENST00000570828 ARIH2O95376 493 aa14.33□□□□□ -0.12
CTDNEP1-205ENST00000570828 CSF2RAP15509 400 aa14.33□□□□□ -0.12
CTDNEP1-205ENST00000570828 KIF5BP33176 963 aa14.33□□□□□ -0.12
CTDNEP1-205ENST00000570828 CYP2C18P33260 490 aa14.33□□□□□ -0.12
CTDNEP1-205ENST00000570828 MCM5P33992 734 aa14.33□□□□□ -0.12
CTDNEP1-205ENST00000570828 PBX2P40425 430 aa14.33□□□□□ -0.12
CTDNEP1-205ENST00000570828 HSD17B4P51659 736 aa14.33□□□□□ -0.12
CTDNEP1-205ENST00000570828 PSRC1Q6PGN9 363 aaPredicted RBP14.33□□□□□ -0.12
CTDNEP1-205ENST00000570828 NFXL1Q6ZNB6 911 aa14.33□□□□□ -0.12
CTDNEP1-205ENST00000570828 ZNF654Q8IZM8 581 aa14.33□□□□□ -0.12
CTDNEP1-205ENST00000570828 CTCFLQ8NI51 663 aaPredicted RBP14.33□□□□□ -0.12
CTDNEP1-205ENST00000570828 IGDCC4Q8TDY8 1250 aa14.33□□□□□ -0.12
CTDNEP1-205ENST00000570828 PIGSQ96S52 555 aa14.33□□□□□ -0.12
CTDNEP1-205ENST00000570828 TRPV6Q9H1D0 765 aa14.33□□□□□ -0.12
CTDNEP1-205ENST00000570828 ALDH8A1Q9H2A2 487 aaPredicted RBP14.33□□□□□ -0.12
CTDNEP1-205ENST00000570828 RIOX1Q9H6W3 641 aa14.33□□□□□ -0.12
CTDNEP1-205ENST00000570828 LY9Q9HBG7 655 aa14.33□□□□□ -0.12
CTDNEP1-205ENST00000570828 MAP3K20Q9NYL2 800 aaKnown RBP14.33□□□□□ -0.12
CTDNEP1-205ENST00000570828 STXBP5LQ9Y2K9 1186 aa14.33□□□□□ -0.12
CTDNEP1-205ENST00000570828 PNMA6FA0A0J9YX94 578 aa14.32□□□□□ -0.12
CTDNEP1-205ENST00000570828 A6NJR5 290 aa14.32□□□□□ -0.12
CTDNEP1-205ENST00000570828 SLC27A2O14975 620 aa14.32□□□□□ -0.12
CTDNEP1-205ENST00000570828 EIF3JO75822 258 aaKnown RBP14.32□□□□□ -0.12
CTDNEP1-205ENST00000570828 GH1P01241 217 aa14.32□□□□□ -0.12
CTDNEP1-205ENST00000570828 GHRHRQ02643 423 aa14.32□□□□□ -0.12
CTDNEP1-205ENST00000570828 SLC35G1Q2M3R5 365 aa14.32□□□□□ -0.12
CTDNEP1-205ENST00000570828 FAM47CQ5HY64 1035 aa14.32□□□□□ -0.12
CTDNEP1-205ENST00000570828 CREB3L3Q68CJ9 461 aa14.32□□□□□ -0.12
CTDNEP1-205ENST00000570828 CCDC62Q6P9F0 684 aa14.32□□□□□ -0.12
CTDNEP1-205ENST00000570828 SAMD3Q8N6K7 520 aa14.32□□□□□ -0.12
CTDNEP1-205ENST00000570828 FAM161BQ96MY7 647 aa14.32□□□□□ -0.12
CTDNEP1-205ENST00000570828 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.32□□□□□ -0.122e-6■■■□□ 15.1
CTDNEP1-205ENST00000570828 MTA3Q9BTC8 594 aa14.32□□□□□ -0.12
CTDNEP1-205ENST00000570828 CCDC69A6NI79 296 aa14.31□□□□□ -0.12
CTDNEP1-205ENST00000570828 GCOM1H8Y6P7 765 aaPredicted RBP14.31□□□□□ -0.12
CTDNEP1-205ENST00000570828 CYTH3O43739 400 aa14.31□□□□□ -0.12
CTDNEP1-205ENST00000570828 NR3C2P08235 984 aa14.31□□□□□ -0.12
CTDNEP1-205ENST00000570828 SUPT20HL2P0C7V6 817 aa14.31□□□□□ -0.12
CTDNEP1-205ENST00000570828 POLR2MP0CAP2 368 aa14.31□□□□□ -0.12
CTDNEP1-205ENST00000570828 HOXA13P31271 388 aaPredicted RBP14.31□□□□□ -0.12
CTDNEP1-205ENST00000570828 LY6KQ17RY6 165 aa14.31□□□□□ -0.12
CTDNEP1-205ENST00000570828 RNF20Q5VTR2 975 aa14.31□□□□□ -0.12
CTDNEP1-205ENST00000570828 SKAP1Q86WV1 359 aa14.31□□□□□ -0.12
CTDNEP1-205ENST00000570828 AFG1LQ8WV93 481 aa14.31□□□□□ -0.12
CTDNEP1-205ENST00000570828 PIBF1Q8WXW3 757 aa14.31□□□□□ -0.12
CTDNEP1-205ENST00000570828 TMEM87BQ96K49 555 aa14.31□□□□□ -0.12
CTDNEP1-205ENST00000570828 MAP3K14Q99558 947 aa14.31□□□□□ -0.12
CTDNEP1-205ENST00000570828 MYL10Q9BUA6 226 aa14.31□□□□□ -0.12
CTDNEP1-205ENST00000570828 NOC4LQ9BVI4 516 aaKnown RBP14.31□□□□□ -0.12
CTDNEP1-205ENST00000570828 TRMT13Q9NUP7 481 aaKnown RBP14.31□□□□□ -0.12
CTDNEP1-205ENST00000570828 MRVI1Q9Y6F6 885 aa14.31□□□□□ -0.12
CTDNEP1-205ENST00000570828 SH2B2O14492 632 aaPredicted RBP14.3□□□□□ -0.12
CTDNEP1-205ENST00000570828 ACRP10323 421 aa14.3□□□□□ -0.12
CTDNEP1-205ENST00000570828 MYCLP12524 364 aaPredicted RBP14.3□□□□□ -0.12
CTDNEP1-205ENST00000570828 CCL23P55773 120 aa14.3□□□□□ -0.12
CTDNEP1-205ENST00000570828 CHMP4BP1P59074 171 aa14.3□□□□□ -0.12
CTDNEP1-205ENST00000570828 ARHGAP1Q07960 439 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms