RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 MMP3P08254 477 aa6.25□□□□□ -1.41
CHD3-212ENST00000570758 CALM1P0DP23 149 aa6.25□□□□□ -1.41
CHD3-212ENST00000570758 CALM2P0DP24 149 aa6.25□□□□□ -1.41
CHD3-212ENST00000570758 CALM3P0DP25 149 aa6.25□□□□□ -1.41
CHD3-212ENST00000570758 CYP2C9P11712 490 aa6.25□□□□□ -1.41
CHD3-212ENST00000570758 CSF2RAP15509 400 aa6.25□□□□□ -1.41
CHD3-212ENST00000570758 CCND2P30279 289 aa6.25□□□□□ -1.41
CHD3-212ENST00000570758 HSPA4P34932 840 aa6.25□□□□□ -1.41
CHD3-212ENST00000570758 GNAQP50148 359 aa6.25□□□□□ -1.41
CHD3-212ENST00000570758 FPGSQ05932 587 aa6.25□□□□□ -1.41
CHD3-212ENST00000570758 FUT2Q10981 343 aa6.25□□□□□ -1.41
CHD3-212ENST00000570758 TRAF1Q13077 416 aa6.25□□□□□ -1.41
CHD3-212ENST00000570758 SEMA3FQ13275 785 aa6.25□□□□□ -1.41
CHD3-212ENST00000570758 NBPF20Q3BBV1 942 aa6.25□□□□□ -1.41
CHD3-212ENST00000570758 MFSD5Q6N075 450 aa6.25□□□□□ -1.41
CHD3-212ENST00000570758 APOA5Q6Q788 366 aa6.25□□□□□ -1.41
CHD3-212ENST00000570758 USP17L6PQ6QN14 398 aa6.25□□□□□ -1.41
CHD3-212ENST00000570758 C16orf59Q7L2K0 433 aa6.25□□□□□ -1.41
CHD3-212ENST00000570758 VSIG10LQ86VR7 867 aa6.25□□□□□ -1.41
CHD3-212ENST00000570758 CCDC82Q8N4S0 544 aa6.25□□□□□ -1.41
CHD3-212ENST00000570758 FANCBQ8NB91 859 aa6.25□□□□□ -1.41
CHD3-212ENST00000570758 KAT2BQ92831 832 aa6.25□□□□□ -1.41
CHD3-212ENST00000570758 NOC4LQ9BVI4 516 aaKnown RBP6.25□□□□□ -1.41
CHD3-212ENST00000570758 ALDH8A1Q9H2A2 487 aaPredicted RBP6.25□□□□□ -1.41
CHD3-212ENST00000570758 BCAS3Q9H6U6 928 aa6.25□□□□□ -1.41
CHD3-212ENST00000570758 FAM217BQ9NTX9 383 aaPredicted RBP6.25□□□□□ -1.41
CHD3-212ENST00000570758 TRMT13Q9NUP7 481 aaKnown RBP6.25□□□□□ -1.41
CHD3-212ENST00000570758 DDX41Q9UJV9 622 aaKnown RBP6.25□□□□□ -1.41
CHD3-212ENST00000570758 SNX14Q9Y5W7 946 aa6.25□□□□□ -1.41
CHD3-212ENST00000570758 MRVI1Q9Y6F6 885 aa6.25□□□□□ -1.41
CHD3-212ENST00000570758 CNTNAP5Q8WYK1 1306 aa6.25□□□□□ -1.41
CHD3-212ENST00000570758 SCN10AQ9Y5Y9 1956 aa6.24□□□□□ -1.41
CHD3-212ENST00000570758 KLF18A0A0U1RQI7 1052 aa6.24□□□□□ -1.41
CHD3-212ENST00000570758 RBAK-RBAKDNI3L0D1 243 aa6.24□□□□□ -1.41
CHD3-212ENST00000570758 PIK3CDO00329 1044 aa6.24□□□□□ -1.41
CHD3-212ENST00000570758 ZBTB43O43298 467 aa6.24□□□□□ -1.41
CHD3-212ENST00000570758 ZNF286BP0CG31 522 aa6.24□□□□□ -1.41
CHD3-212ENST00000570758 ACRP10323 421 aa6.24□□□□□ -1.41
CHD3-212ENST00000570758 UBA1P22314 1058 aaKnown RBP6.24□□□□□ -1.41
CHD3-212ENST00000570758 CDC27P30260 824 aa6.24□□□□□ -1.41
CHD3-212ENST00000570758 CCL23P55773 120 aa6.24□□□□□ -1.41
CHD3-212ENST00000570758 CHMP4BP1P59074 171 aa6.24□□□□□ -1.41
CHD3-212ENST00000570758 MRPS9P82933 396 aaKnown RBP6.24□□□□□ -1.41
CHD3-212ENST00000570758 SP2Q02086 613 aa6.24□□□□□ -1.41
CHD3-212ENST00000570758 KRT32Q14532 448 aa6.24□□□□□ -1.41
CHD3-212ENST00000570758 UBE2SQ16763 222 aa6.24□□□□□ -1.41
CHD3-212ENST00000570758 RTN1Q16799 776 aa6.24□□□□□ -1.41
CHD3-212ENST00000570758 BRDTQ58F21 947 aaPredicted RBP6.24□□□□□ -1.41
CHD3-212ENST00000570758 FAM47CQ5HY64 1035 aa6.24□□□□□ -1.41
CHD3-212ENST00000570758 TMEM240Q5SV17 173 aa6.24□□□□□ -1.41
CHD3-212ENST00000570758 CELF3Q5SZQ8 465 aaKnown RBP6.24□□□□□ -1.41
CHD3-212ENST00000570758 TYW1BQ6NUM6 668 aa6.24□□□□□ -1.41
CHD3-212ENST00000570758 GPR153Q6NV75 609 aa6.24□□□□□ -1.41
CHD3-212ENST00000570758 SYNE3Q6ZMZ3 975 aa6.24□□□□□ -1.41
CHD3-212ENST00000570758 DEFB123Q8N688 67 aa6.24□□□□□ -1.41
CHD3-212ENST00000570758 EMID1Q96A84 441 aaPredicted RBP6.24□□□□□ -1.41
CHD3-212ENST00000570758 VWCEQ96DN2 955 aa6.24□□□□□ -1.41
CHD3-212ENST00000570758 RNPC3Q96LT9 517 aaKnown RBP6.24□□□□□ -1.41
CHD3-212ENST00000570758 JAKMIP1Q96N16 626 aaKnown RBP6.24□□□□□ -1.41
CHD3-212ENST00000570758 CTAGE1Q96RT6 745 aa6.24□□□□□ -1.41
CHD3-212ENST00000570758 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.24□□□□□ -1.41
CHD3-212ENST00000570758 SEZ6LQ9BYH1 1024 aa6.24□□□□□ -1.41
CHD3-212ENST00000570758 WNT8AQ9H1J5 351 aa6.24□□□□□ -1.41
CHD3-212ENST00000570758 HIPK3Q9H422 1215 aa6.24□□□□□ -1.41
CHD3-212ENST00000570758 MTMR10Q9NXD2 777 aa6.24□□□□□ -1.41
CHD3-212ENST00000570758 PPP4R2Q9NY27 417 aa6.24□□□□□ -1.41
CHD3-212ENST00000570758 SEC63Q9UGP8 760 aaKnown RBP6.24□□□□□ -1.41
CHD3-212ENST00000570758 KIAA1217Q5T5P2 1943 aa6.24□□□□□ -1.41
CHD3-212ENST00000570758 GOLGA8AA7E2F4 631 aa6.23□□□□□ -1.41
CHD3-212ENST00000570758 GOLGA8BA8MQT2 603 aa6.23□□□□□ -1.41
CHD3-212ENST00000570758 HAS3O00219 553 aa6.23□□□□□ -1.41
CHD3-212ENST00000570758 GGPS1O95749 300 aa6.23□□□□□ -1.41
CHD3-212ENST00000570758 HMGB1P09429 215 aaKnown RBP6.23□□□□□ -1.41
CHD3-212ENST00000570758 HOXD8P13378 290 aaPredicted RBP6.23□□□□□ -1.41
CHD3-212ENST00000570758 RPS6KB1P23443 525 aa6.23□□□□□ -1.41
CHD3-212ENST00000570758 ICAM3P32942 547 aa6.23□□□□□ -1.41
CHD3-212ENST00000570758 ADD1P35611 737 aaKnown RBP6.23□□□□□ -1.41
CHD3-212ENST00000570758 PSEN2P49810 448 aa6.23□□□□□ -1.41
CHD3-212ENST00000570758 APOBRQ0VD83 1088 aa6.23□□□□□ -1.41
CHD3-212ENST00000570758 PPIGQ13427 754 aaKnown RBP eCLIP6.23□□□□□ -1.41
CHD3-212ENST00000570758 LAMC2Q13753 1193 aa6.23□□□□□ -1.41
CHD3-212ENST00000570758 DGKDQ16760 1214 aa6.23□□□□□ -1.41
CHD3-212ENST00000570758 HSDL1Q3SXM5 330 aa6.23□□□□□ -1.41
CHD3-212ENST00000570758 RASIP1Q5U651 963 aa6.23□□□□□ -1.41
CHD3-212ENST00000570758 MYSM1Q5VVJ2 828 aa6.23□□□□□ -1.41
CHD3-212ENST00000570758 WWC2Q6AWC2 1192 aa6.23□□□□□ -1.41
CHD3-212ENST00000570758 FAM109BQ6ICB4 259 aaPredicted RBP6.23□□□□□ -1.41
CHD3-212ENST00000570758 GDF6Q6KF10 455 aaPredicted RBP6.23□□□□□ -1.41
CHD3-212ENST00000570758 NFRKBQ6P4R8 1299 aa6.23□□□□□ -1.41
CHD3-212ENST00000570758 BLOC1S2Q6QNY1 142 aa6.23□□□□□ -1.41
CHD3-212ENST00000570758 Q6ZUG5 572 aa6.23□□□□□ -1.41
CHD3-212ENST00000570758 ZNF365Q70YC5 407 aa6.23□□□□□ -1.41
CHD3-212ENST00000570758 HEATR3Q7Z4Q2 680 aa6.23□□□□□ -1.41
CHD3-212ENST00000570758 DHX37Q8IY37 1157 aaKnown RBP6.23□□□□□ -1.41
CHD3-212ENST00000570758 TMEM199Q8N511 208 aa6.23□□□□□ -1.41
CHD3-212ENST00000570758 PPTC7Q8NI37 304 aa6.23□□□□□ -1.41
CHD3-212ENST00000570758 SMARCC2Q8TAQ2 1214 aa6.23□□□□□ -1.41
CHD3-212ENST00000570758 DHX38Q92620 1227 aaKnown RBP6.23□□□□□ -1.41
CHD3-212ENST00000570758 SCLYQ96I15 445 aa6.23□□□□□ -1.41
CHD3-212ENST00000570758 SPATA33Q96N06 139 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms