RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 PNMA6FA0A0J9YX94 578 aa17.47■□□□□ 0.39
RAB40B-203ENST00000570676 RGS20O76081 388 aa17.47■□□□□ 0.39
RAB40B-203ENST00000570676 PSMA5P28066 241 aa17.47■□□□□ 0.39
RAB40B-203ENST00000570676 HOXA13P31271 388 aaPredicted RBP17.47■□□□□ 0.39
RAB40B-203ENST00000570676 MCM5P33992 734 aa17.47■□□□□ 0.39
RAB40B-203ENST00000570676 LY6KQ17RY6 165 aa17.47■□□□□ 0.39
RAB40B-203ENST00000570676 TMEM240Q5SV17 173 aa17.47■□□□□ 0.39
RAB40B-203ENST00000570676 RASIP1Q5U651 963 aa17.47■□□□□ 0.39
RAB40B-203ENST00000570676 TMEM199Q8N511 208 aa17.47■□□□□ 0.39
RAB40B-203ENST00000570676 SAMD3Q8N6K7 520 aa17.47■□□□□ 0.39
RAB40B-203ENST00000570676 NEK1Q96PY6 1258 aa17.47■□□□□ 0.39
RAB40B-203ENST00000570676 SPZ1Q9BXG8 430 aa17.47■□□□□ 0.39
RAB40B-203ENST00000570676 WNT8AQ9H1J5 351 aa17.47■□□□□ 0.39
RAB40B-203ENST00000570676 TSHZ2Q9NRE2 1034 aa17.47■□□□□ 0.39
RAB40B-203ENST00000570676 FRMPD4Q14CM0 1322 aa17.47■□□□□ 0.39
RAB40B-203ENST00000570676 GH1P01241 217 aa17.46■□□□□ 0.39
RAB40B-203ENST00000570676 MMP3P08254 477 aa17.46■□□□□ 0.39
RAB40B-203ENST00000570676 CASTP20810 708 aaKnown RBP17.46■□□□□ 0.39
RAB40B-203ENST00000570676 PGM5Q15124 567 aa17.46■□□□□ 0.39
RAB40B-203ENST00000570676 BRDTQ58F21 947 aaPredicted RBP17.46■□□□□ 0.39
RAB40B-203ENST00000570676 ZNF697Q5TEC3 545 aa17.46■□□□□ 0.39
RAB40B-203ENST00000570676 PPP1R13LQ8WUF5 828 aa17.46■□□□□ 0.39
RAB40B-203ENST00000570676 TMEM87BQ96K49 555 aa17.46■□□□□ 0.39
RAB40B-203ENST00000570676 TM6SF1Q9BZW5 370 aa17.46■□□□□ 0.39
RAB40B-203ENST00000570676 TRMT13Q9NUP7 481 aaKnown RBP17.46■□□□□ 0.39
RAB40B-203ENST00000570676 STXBP5LQ9Y2K9 1186 aa17.46■□□□□ 0.39
RAB40B-203ENST00000570676 KPNA6O60684 536 aa17.45■□□□□ 0.38
RAB40B-203ENST00000570676 EIF3JO75822 258 aaKnown RBP17.45■□□□□ 0.38
RAB40B-203ENST00000570676 PLEKHA8P1O95397 391 aa17.45■□□□□ 0.38
RAB40B-203ENST00000570676 LIFRP42702 1097 aa17.45■□□□□ 0.38
RAB40B-203ENST00000570676 TRAF1Q13077 416 aa17.45■□□□□ 0.38
RAB40B-203ENST00000570676 NBPF20Q3BBV1 942 aa17.45■□□□□ 0.38
RAB40B-203ENST00000570676 PSRC1Q6PGN9 363 aaPredicted RBP17.45■□□□□ 0.38
RAB40B-203ENST00000570676 BLOC1S2Q6QNY1 142 aa17.45■□□□□ 0.38
RAB40B-203ENST00000570676 CTCFLQ8NI51 663 aaPredicted RBP17.45■□□□□ 0.38
RAB40B-203ENST00000570676 AFG1LQ8WV93 481 aa17.45■□□□□ 0.38
RAB40B-203ENST00000570676 EMID1Q96A84 441 aaPredicted RBP17.45■□□□□ 0.38
RAB40B-203ENST00000570676 FAM161BQ96MY7 647 aa17.45■□□□□ 0.38
RAB40B-203ENST00000570676 UPF3BQ9BZI7 483 aaKnown RBP17.45■□□□□ 0.38
RAB40B-203ENST00000570676 TTYH1Q9H313 450 aaPredicted RBP17.45■□□□□ 0.38
RAB40B-203ENST00000570676 ZSWIM6Q9HCJ5 1215 aa17.45■□□□□ 0.38
RAB40B-203ENST00000570676 IL23AQ9NPF7 189 aa17.45■□□□□ 0.38
RAB40B-203ENST00000570676 DDX41Q9UJV9 622 aaKnown RBP17.45■□□□□ 0.38
RAB40B-203ENST00000570676 GCOM1H8Y6P7 765 aaPredicted RBP17.44■□□□□ 0.38
RAB40B-203ENST00000570676 HMGB1P09429 215 aaKnown RBP17.44■□□□□ 0.38
RAB40B-203ENST00000570676 POLR2MP0CAP2 368 aa17.44■□□□□ 0.38
RAB40B-203ENST00000570676 ACRP10323 421 aa17.44■□□□□ 0.38
RAB40B-203ENST00000570676 RXRAP19793 462 aa17.44■□□□□ 0.38
RAB40B-203ENST00000570676 KIF5BP33176 963 aa17.44■□□□□ 0.38
RAB40B-203ENST00000570676 RABEP1Q15276 862 aa17.44■□□□□ 0.38
RAB40B-203ENST00000570676 NFRKBQ6P4R8 1299 aa17.44■□□□□ 0.38
RAB40B-203ENST00000570676 ZNF365Q70YC5 407 aa17.44■□□□□ 0.38
RAB40B-203ENST00000570676 PIBF1Q8WXW3 757 aa17.44■□□□□ 0.38
RAB40B-203ENST00000570676 KAT2BQ92831 832 aa17.44■□□□□ 0.38
RAB40B-203ENST00000570676 VWCEQ96DN2 955 aa17.44■□□□□ 0.38
RAB40B-203ENST00000570676 LRRC2Q9BYS8 371 aa17.44■□□□□ 0.38
RAB40B-203ENST00000570676 CYP46A1Q9Y6A2 500 aa17.44■□□□□ 0.38
RAB40B-203ENST00000570676 MRVI1Q9Y6F6 885 aa17.44■□□□□ 0.38
RAB40B-203ENST00000570676 TRIP12Q14669 1992 aaPredicted RBP17.43■□□□□ 0.38
RAB40B-203ENST00000570676 CCDC69A6NI79 296 aa17.43■□□□□ 0.38
RAB40B-203ENST00000570676 CYP2C9P11712 490 aa17.43■□□□□ 0.38
RAB40B-203ENST00000570676 MYCLP12524 364 aaPredicted RBP17.43■□□□□ 0.38
RAB40B-203ENST00000570676 CPA1P15085 419 aa17.43■□□□□ 0.38
RAB40B-203ENST00000570676 SMARCA1P28370 1054 aa17.43■□□□□ 0.38
RAB40B-203ENST00000570676 CCL23P55773 120 aa17.43■□□□□ 0.38
RAB40B-203ENST00000570676 RUFY3Q7L099 469 aa17.43■□□□□ 0.38
RAB40B-203ENST00000570676 VSIG10LQ86VR7 867 aa17.43■□□□□ 0.38
RAB40B-203ENST00000570676 PTPRSQ13332 1948 aa17.43■□□□□ 0.38
RAB40B-203ENST00000570676 TMEM265A0A087WTH1 108 aa17.42■□□□□ 0.38
RAB40B-203ENST00000570676 SUPT20HL2P0C7V6 817 aa17.42■□□□□ 0.38
RAB40B-203ENST00000570676 HOXD8P13378 290 aaPredicted RBP17.42■□□□□ 0.38
RAB40B-203ENST00000570676 RPS6KB1P23443 525 aa17.42■□□□□ 0.38
RAB40B-203ENST00000570676 NEK4P51957 841 aa17.42■□□□□ 0.38
RAB40B-203ENST00000570676 PTPN11Q06124 597 aaPredicted RBP17.42■□□□□ 0.38
RAB40B-203ENST00000570676 FAM47CQ5HY64 1035 aa17.42■□□□□ 0.38
RAB40B-203ENST00000570676 NFXL1Q6ZNB6 911 aa17.42■□□□□ 0.38
RAB40B-203ENST00000570676 DHX32Q7L7V1 743 aaKnown RBP17.42■□□□□ 0.38
RAB40B-203ENST00000570676 SGMS1Q86VZ5 419 aa17.42■□□□□ 0.38
RAB40B-203ENST00000570676 FCHSD1Q86WN1 690 aa17.42■□□□□ 0.38
RAB40B-203ENST00000570676 RAB11FIP4Q86YS3 637 aa17.42■□□□□ 0.38
RAB40B-203ENST00000570676 TMTC2Q8N394 836 aa17.42■□□□□ 0.38
RAB40B-203ENST00000570676 SRBD1Q8N5C6 995 aaKnown RBP17.42■□□□□ 0.38
RAB40B-203ENST00000570676 HERVK_113Q902F9 699 aa17.42■□□□□ 0.38
RAB40B-203ENST00000570676 GPKOWQ92917 476 aaPredicted RBP eCLIP17.42■□□□□ 0.38
RAB40B-203ENST00000570676 RRP36Q96EU6 259 aaKnown RBP17.42■□□□□ 0.38
RAB40B-203ENST00000570676 SCLYQ96I15 445 aa17.42■□□□□ 0.38
RAB40B-203ENST00000570676 CTAGE1Q96RT6 745 aa17.42■□□□□ 0.38
RAB40B-203ENST00000570676 LZTS2Q9BRK4 669 aa17.42■□□□□ 0.38
RAB40B-203ENST00000570676 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.41■□□□□ 0.38
RAB40B-203ENST00000570676 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.41■□□□□ 0.38
RAB40B-203ENST00000570676 UBA1P22314 1058 aaKnown RBP17.41■□□□□ 0.38
RAB40B-203ENST00000570676 DNAJB2P25686 324 aa17.41■□□□□ 0.38
RAB40B-203ENST00000570676 CCND2P30279 289 aa17.41■□□□□ 0.38
RAB40B-203ENST00000570676 SESTD1Q86VW0 696 aa17.41■□□□□ 0.38
RAB40B-203ENST00000570676 CMTR1Q8N1G2 835 aaKnown RBP17.41■□□□□ 0.38
RAB40B-203ENST00000570676 PPTC7Q8NI37 304 aa17.41■□□□□ 0.38
RAB40B-203ENST00000570676 ZFP91Q96JP5 570 aaPredicted RBP17.41■□□□□ 0.38
RAB40B-203ENST00000570676 SEMA6BQ9H3T3 888 aa17.41■□□□□ 0.38
RAB40B-203ENST00000570676 CXXC1Q9P0U4 656 aaPredicted RBP17.41■□□□□ 0.38
RAB40B-203ENST00000570676 F2P00734 622 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms