RNA–Protein interactions for RNA: ENST00000570606.5

SMG6-204, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-204ENST00000570606 ABHD16BQ9H3Z7 469 aa7.69□□□□□ -1.18
SMG6-204ENST00000570606 RNF146Q9NTX7 359 aa7.69□□□□□ -1.18
SMG6-204ENST00000570606 STX8Q9UNK0 236 aa7.69□□□□□ -1.18
SMG6-204ENST00000570606 MTMR7Q9Y216 660 aa7.69□□□□□ -1.18
SMG6-204ENST00000570606 FCF1Q9Y324 198 aaKnown RBP7.69□□□□□ -1.18
SMG6-204ENST00000570606 ELP1O95163 1332 aa7.69□□□□□ -1.18
SMG6-204ENST00000570606 SPTBN5Q9NRC6 3674 aaKnown RBP7.68□□□□□ -1.18
SMG6-204ENST00000570606 ADCY6O43306 1168 aa7.68□□□□□ -1.18
SMG6-204ENST00000570606 TIMP1P01033 207 aa7.68□□□□□ -1.18
SMG6-204ENST00000570606 ALAS1P13196 640 aa7.68□□□□□ -1.18
SMG6-204ENST00000570606 MX1P20591 662 aa7.68□□□□□ -1.18
SMG6-204ENST00000570606 GJA9P57773 515 aa7.68□□□□□ -1.18
SMG6-204ENST00000570606 TFAP4Q01664 338 aa7.68□□□□□ -1.18
SMG6-204ENST00000570606 CNTN2Q02246 1040 aa7.68□□□□□ -1.18
SMG6-204ENST00000570606 CCDC96Q2M329 555 aa7.68□□□□□ -1.18
SMG6-204ENST00000570606 TKFCQ3LXA3 575 aa7.68□□□□□ -1.18
SMG6-204ENST00000570606 GNASQ5JWF2 1037 aa7.68□□□□□ -1.18
SMG6-204ENST00000570606 ZMYM1Q5SVZ6 1142 aa7.68□□□□□ -1.18
SMG6-204ENST00000570606 CCDC129Q6ZRS4 1044 aa7.68□□□□□ -1.18
SMG6-204ENST00000570606 PLEKHM2Q8IWE5 1019 aa7.68□□□□□ -1.18
SMG6-204ENST00000570606 PHTF2Q8N3S3 785 aa7.68□□□□□ -1.18
SMG6-204ENST00000570606 PI4K2BQ8TCG2 481 aa7.68□□□□□ -1.18
SMG6-204ENST00000570606 CHURC1Q8WUH1 139 aa7.68□□□□□ -1.18
SMG6-204ENST00000570606 ZNF592Q92610 1267 aa7.68□□□□□ -1.18
SMG6-204ENST00000570606 MKL1Q969V6 931 aa7.68□□□□□ -1.18
SMG6-204ENST00000570606 GMCL1Q96IK5 515 aa7.68□□□□□ -1.18
SMG6-204ENST00000570606 FGD4Q96M96 766 aa7.68□□□□□ -1.18
SMG6-204ENST00000570606 COL25A1Q9BXS0 654 aaPredicted RBP7.68□□□□□ -1.18
SMG6-204ENST00000570606 UPF3AQ9H1J1 476 aaKnown RBP7.68□□□□□ -1.18
SMG6-204ENST00000570606 TBX21Q9UL17 535 aa7.68□□□□□ -1.18
SMG6-204ENST00000570606 USTQ9Y2C2 406 aa7.68□□□□□ -1.18
SMG6-204ENST00000570606 PCDHB9Q9Y5E1 797 aa7.68□□□□□ -1.18
SMG6-204ENST00000570606 MYH6P13533 1939 aa7.68□□□□□ -1.18
SMG6-204ENST00000570606 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.67□□□□□ -1.18
SMG6-204ENST00000570606 ASB14A6NK59 587 aa7.67□□□□□ -1.18
SMG6-204ENST00000570606 ARVCFO00192 962 aa7.67□□□□□ -1.18
SMG6-204ENST00000570606 RANBP6O60518 1105 aaKnown RBP7.67□□□□□ -1.18
SMG6-204ENST00000570606 SKIP12755 728 aa7.67□□□□□ -1.18
SMG6-204ENST00000570606 MCCP23508 829 aa7.67□□□□□ -1.18
SMG6-204ENST00000570606 BEX3Q00994 111 aa7.67□□□□□ -1.18
SMG6-204ENST00000570606 TNFAIP2Q03169 654 aa7.67□□□□□ -1.18
SMG6-204ENST00000570606 CCSAPQ6IQ19 270 aaPredicted RBP7.67□□□□□ -1.18
SMG6-204ENST00000570606 MFSD5Q6N075 450 aa7.67□□□□□ -1.18
SMG6-204ENST00000570606 PSRC1Q6PGN9 363 aaPredicted RBP7.67□□□□□ -1.18
SMG6-204ENST00000570606 KCTD1Q719H9 257 aa7.67□□□□□ -1.18
SMG6-204ENST00000570606 RASGRP2Q7LDG7 609 aa7.67□□□□□ -1.18
SMG6-204ENST00000570606 TLK2Q86UE8 772 aa7.67□□□□□ -1.18
SMG6-204ENST00000570606 FBXO16Q8IX29 292 aaPredicted RBP7.67□□□□□ -1.18
SMG6-204ENST00000570606 TMEM199Q8N511 208 aa7.67□□□□□ -1.18
SMG6-204ENST00000570606 KCTD17Q8N5Z5 321 aa7.67□□□□□ -1.18
SMG6-204ENST00000570606 FAM133AQ8N9E0 248 aa7.67□□□□□ -1.18
SMG6-204ENST00000570606 OTUD7AQ8TE49 926 aaPredicted RBP7.67□□□□□ -1.18
SMG6-204ENST00000570606 STAG1Q8WVM7 1258 aa7.67□□□□□ -1.18
SMG6-204ENST00000570606 BAP1Q92560 729 aa7.67□□□□□ -1.18
SMG6-204ENST00000570606 TIFAQ96CG3 184 aa7.67□□□□□ -1.18
SMG6-204ENST00000570606 AGBL1Q96MI9 1066 aa7.67□□□□□ -1.18
SMG6-204ENST00000570606 TRERF1Q96PN7 1200 aa7.67□□□□□ -1.18
SMG6-204ENST00000570606 AP5M1Q9H0R1 490 aa7.67□□□□□ -1.18
SMG6-204ENST00000570606 A1CFQ9NQ94 594 aaKnown RBP7.67□□□□□ -1.18
SMG6-204ENST00000570606 TOMM22Q9NS69 142 aa7.67□□□□□ -1.18
SMG6-204ENST00000570606 CCPG1Q9ULG6 757 aa7.67□□□□□ -1.18
SMG6-204ENST00000570606 LAMA4Q16363 1823 aa7.66□□□□□ -1.18
SMG6-204ENST00000570606 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.66□□□□□ -1.18
SMG6-204ENST00000570606 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.66□□□□□ -1.18
SMG6-204ENST00000570606 ZEB2O60315 1214 aa7.66□□□□□ -1.18
SMG6-204ENST00000570606 CSF2RAP15509 400 aa7.66□□□□□ -1.18
SMG6-204ENST00000570606 SNAP25P60880 206 aa7.66□□□□□ -1.18
SMG6-204ENST00000570606 PDE4CQ08493 712 aa7.66□□□□□ -1.18
SMG6-204ENST00000570606 FSCN1Q16658 493 aaKnown RBP7.66□□□□□ -1.18
SMG6-204ENST00000570606 C4orf48Q5BLP8 95 aa7.66□□□□□ -1.18
SMG6-204ENST00000570606 RRP12Q5JTH9 1297 aaKnown RBP7.66□□□□□ -1.18
SMG6-204ENST00000570606 NSMFQ6X4W1 530 aa7.66□□□□□ -1.18
SMG6-204ENST00000570606 EEPD1Q7L9B9 569 aa7.66□□□□□ -1.18
SMG6-204ENST00000570606 ZBTB33Q86T24 672 aa7.66□□□□□ -1.18
SMG6-204ENST00000570606 FAM126BQ8IXS8 530 aa7.66□□□□□ -1.18
SMG6-204ENST00000570606 ZNF511Q8NB15 262 aa7.66□□□□□ -1.18
SMG6-204ENST00000570606 DCAF4Q8WV16 495 aa7.66□□□□□ -1.18
SMG6-204ENST00000570606 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.66□□□□□ -1.188e-7■■■■■ 32.7
SMG6-204ENST00000570606 KATNBL1Q9H079 304 aa7.66□□□□□ -1.18
SMG6-204ENST00000570606 MTIF3Q9H2K0 278 aaKnown RBP7.66□□□□□ -1.18
SMG6-204ENST00000570606 PRR12Q9ULL5 1215 aa7.66□□□□□ -1.18
SMG6-204ENST00000570606 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.66□□□□□ -1.18
SMG6-204ENST00000570606 ZNF536O15090 1300 aa7.66□□□□□ -1.18
SMG6-204ENST00000570606 TANC1Q9C0D5 1861 aa7.66□□□□□ -1.18
SMG6-204ENST00000570606 ASTN1O14525 1302 aa7.65□□□□□ -1.18
SMG6-204ENST00000570606 NMT2O60551 498 aa7.65□□□□□ -1.18
SMG6-204ENST00000570606 PLA2G6O60733 806 aa7.65□□□□□ -1.18
SMG6-204ENST00000570606 CABYRO75952 493 aa7.65□□□□□ -1.18
SMG6-204ENST00000570606 ACRP10323 421 aa7.65□□□□□ -1.18
SMG6-204ENST00000570606 CYP2C18P33260 490 aa7.65□□□□□ -1.18
SMG6-204ENST00000570606 CDK7P50613 346 aa7.65□□□□□ -1.18
SMG6-204ENST00000570606 SCN5AQ14524 2016 aa7.65□□□□□ -1.18
SMG6-204ENST00000570606 GRIN2CQ14957 1233 aa7.65□□□□□ -1.18
SMG6-204ENST00000570606 MUM1L1Q5H9M0 696 aa7.65□□□□□ -1.18
SMG6-204ENST00000570606 TMEM240Q5SV17 173 aa7.65□□□□□ -1.18
SMG6-204ENST00000570606 FRMPD2Q68DX3 1309 aaPredicted RBP7.65□□□□□ -1.18
SMG6-204ENST00000570606 RCSD1Q6JBY9 416 aa7.65□□□□□ -1.18
SMG6-204ENST00000570606 CXCL17Q6UXB2 119 aa7.65□□□□□ -1.18
SMG6-204ENST00000570606 FOXJ1Q92949 421 aa7.65□□□□□ -1.18
SMG6-204ENST00000570606 GAS2L1Q99501 681 aaPredicted RBP7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms