RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 PPP1R12CQ9BZL4 782 aa19.79■□□□□ 0.76
MAP1LC3B-208ENST00000570189 TRPV6Q9H1D0 765 aa19.79■□□□□ 0.76
MAP1LC3B-208ENST00000570189 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.78■□□□□ 0.76
MAP1LC3B-208ENST00000570189 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.78■□□□□ 0.76
MAP1LC3B-208ENST00000570189 GCOM1H8Y6P7 765 aaPredicted RBP19.78■□□□□ 0.76
MAP1LC3B-208ENST00000570189 RGS20O76081 388 aa19.78■□□□□ 0.76
MAP1LC3B-208ENST00000570189 MMP3P08254 477 aa19.78■□□□□ 0.76
MAP1LC3B-208ENST00000570189 POLR2MP0CAP2 368 aa19.78■□□□□ 0.76
MAP1LC3B-208ENST00000570189 TGFB3P10600 412 aa19.78■□□□□ 0.76
MAP1LC3B-208ENST00000570189 CYP2C18P33260 490 aa19.78■□□□□ 0.76
MAP1LC3B-208ENST00000570189 LY6KQ17RY6 165 aa19.78■□□□□ 0.76
MAP1LC3B-208ENST00000570189 NBPF20Q3BBV1 942 aa19.78■□□□□ 0.76
MAP1LC3B-208ENST00000570189 RNF20Q5VTR2 975 aa19.78■□□□□ 0.76
MAP1LC3B-208ENST00000570189 SEPT14Q6ZU15 432 aa19.78■□□□□ 0.76
MAP1LC3B-208ENST00000570189 HERVK_113Q902F9 699 aa19.78■□□□□ 0.76
MAP1LC3B-208ENST00000570189 ANO2Q9NQ90 1003 aa19.78■□□□□ 0.76
MAP1LC3B-208ENST00000570189 PIK3CDO00329 1044 aa19.77■□□□□ 0.76
MAP1LC3B-208ENST00000570189 STAM2O75886 525 aa19.77■□□□□ 0.76
MAP1LC3B-208ENST00000570189 LAMC2Q13753 1193 aa19.77■□□□□ 0.76
MAP1LC3B-208ENST00000570189 PPTC7Q8NI37 304 aa19.77■□□□□ 0.76
MAP1LC3B-208ENST00000570189 AFG1LQ8WV93 481 aa19.77■□□□□ 0.76
MAP1LC3B-208ENST00000570189 WNT8AQ9H1J5 351 aa19.77■□□□□ 0.76
MAP1LC3B-208ENST00000570189 SEMA6BQ9H3T3 888 aa19.77■□□□□ 0.76
MAP1LC3B-208ENST00000570189 CDH23Q9H251 3354 aa19.77■□□□□ 0.76
MAP1LC3B-208ENST00000570189 GBF1Q92538 1859 aa19.77■□□□□ 0.76
MAP1LC3B-208ENST00000570189 TRIP12Q14669 1992 aaPredicted RBP19.77■□□□□ 0.75
MAP1LC3B-208ENST00000570189 UMODL1Q5DID0 1318 aa19.76■□□□□ 0.75
MAP1LC3B-208ENST00000570189 SCN5AQ14524 2016 aa19.76■□□□□ 0.75
MAP1LC3B-208ENST00000570189 PITPNM1O00562 1244 aa19.76■□□□□ 0.75
MAP1LC3B-208ENST00000570189 PFKMP08237 780 aa19.76■□□□□ 0.75
MAP1LC3B-208ENST00000570189 HOXA13P31271 388 aaPredicted RBP19.76■□□□□ 0.75
MAP1LC3B-208ENST00000570189 COL9A3Q14050 684 aaPredicted RBP19.76■□□□□ 0.75
MAP1LC3B-208ENST00000570189 RRP36Q96EU6 259 aaKnown RBP19.76■□□□□ 0.75
MAP1LC3B-208ENST00000570189 TRMT13Q9NUP7 481 aaKnown RBP19.76■□□□□ 0.75
MAP1LC3B-208ENST00000570189 MRVI1Q9Y6F6 885 aa19.76■□□□□ 0.75
MAP1LC3B-208ENST00000570189 CCDC69A6NI79 296 aa19.75■□□□□ 0.75
MAP1LC3B-208ENST00000570189 CDC45O75419 566 aa19.75■□□□□ 0.75
MAP1LC3B-208ENST00000570189 CASTP20810 708 aaKnown RBP19.75■□□□□ 0.75
MAP1LC3B-208ENST00000570189 CCND2P30279 289 aa19.75■□□□□ 0.75
MAP1LC3B-208ENST00000570189 DGKDQ16760 1214 aa19.75■□□□□ 0.75
MAP1LC3B-208ENST00000570189 ZNF365Q70YC5 407 aa19.75■□□□□ 0.75
MAP1LC3B-208ENST00000570189 TEX2Q8IWB9 1127 aa19.75■□□□□ 0.75
MAP1LC3B-208ENST00000570189 RPUSD2Q8IZ73 545 aaKnown RBP19.75■□□□□ 0.75
MAP1LC3B-208ENST00000570189 KAT2BQ92831 832 aa19.75■□□□□ 0.75
MAP1LC3B-208ENST00000570189 VWCEQ96DN2 955 aa19.75■□□□□ 0.75
MAP1LC3B-208ENST00000570189 MTIF3Q9H2K0 278 aaKnown RBP19.75■□□□□ 0.75
MAP1LC3B-208ENST00000570189 TTYH1Q9H313 450 aaPredicted RBP19.75■□□□□ 0.75
MAP1LC3B-208ENST00000570189 ICAM3P32942 547 aa19.74■□□□□ 0.75
MAP1LC3B-208ENST00000570189 RFC2P35250 354 aa19.74■□□□□ 0.75
MAP1LC3B-208ENST00000570189 MYSM1Q5VVJ2 828 aa19.74■□□□□ 0.75
MAP1LC3B-208ENST00000570189 SRBD1Q8N5C6 995 aaKnown RBP19.74■□□□□ 0.75
MAP1LC3B-208ENST00000570189 IL31RAQ8NI17 732 aa19.74■□□□□ 0.75
MAP1LC3B-208ENST00000570189 INPP4AQ96PE3 977 aaPredicted RBP19.74■□□□□ 0.75
MAP1LC3B-208ENST00000570189 MYL10Q9BUA6 226 aa19.74■□□□□ 0.75
MAP1LC3B-208ENST00000570189 KATNAL1Q9BW62 490 aa19.74■□□□□ 0.75
MAP1LC3B-208ENST00000570189 SEC63Q9UGP8 760 aaKnown RBP19.74■□□□□ 0.75
MAP1LC3B-208ENST00000570189 HAS3O00219 553 aa19.73■□□□□ 0.75
MAP1LC3B-208ENST00000570189 F2P00734 622 aa19.73■□□□□ 0.75
MAP1LC3B-208ENST00000570189 FGBP02675 491 aa19.73■□□□□ 0.75
MAP1LC3B-208ENST00000570189 DNAJB2P25686 324 aa19.73■□□□□ 0.75
MAP1LC3B-208ENST00000570189 EXOSC10Q01780 885 aaKnown RBP19.73■□□□□ 0.75
MAP1LC3B-208ENST00000570189 RBL2Q08999 1139 aa19.73■□□□□ 0.75
MAP1LC3B-208ENST00000570189 CELF3Q5SZQ8 465 aaKnown RBP19.73■□□□□ 0.75
MAP1LC3B-208ENST00000570189 XRRA1Q6P2D8 792 aa19.73■□□□□ 0.75
MAP1LC3B-208ENST00000570189 NFXL1Q6ZNB6 911 aa19.73■□□□□ 0.75
MAP1LC3B-208ENST00000570189 FANCBQ8NB91 859 aa19.73■□□□□ 0.75
MAP1LC3B-208ENST00000570189 NEK1Q96PY6 1258 aa19.73■□□□□ 0.75
MAP1LC3B-208ENST00000570189 SLC12A7Q9Y666 1083 aa19.73■□□□□ 0.75
MAP1LC3B-208ENST00000570189 CHD9Q3L8U1 2897 aa19.72■□□□□ 0.75
MAP1LC3B-208ENST00000570189 MEIS2O14770 477 aa19.72■□□□□ 0.75
MAP1LC3B-208ENST00000570189 PPFIA4O75335 1185 aa19.72■□□□□ 0.75
MAP1LC3B-208ENST00000570189 PLEKHA8P1O95397 391 aa19.72■□□□□ 0.75
MAP1LC3B-208ENST00000570189 ACRP10323 421 aa19.72■□□□□ 0.75
MAP1LC3B-208ENST00000570189 MYCLP12524 364 aaPredicted RBP19.72■□□□□ 0.75
MAP1LC3B-208ENST00000570189 RCAN1P53805 252 aa19.72■□□□□ 0.75
MAP1LC3B-208ENST00000570189 KRT32Q14532 448 aa19.72■□□□□ 0.75
MAP1LC3B-208ENST00000570189 TMTC3Q6ZXV5 915 aa19.72■□□□□ 0.75
MAP1LC3B-208ENST00000570189 SKAP1Q86WV1 359 aa19.72■□□□□ 0.75
MAP1LC3B-208ENST00000570189 DHX37Q8IY37 1157 aaKnown RBP19.72■□□□□ 0.75
MAP1LC3B-208ENST00000570189 CAGE1Q8TC20 777 aa19.72■□□□□ 0.75
MAP1LC3B-208ENST00000570189 KCNB2Q92953 911 aa19.72■□□□□ 0.75
MAP1LC3B-208ENST00000570189 CTAGE1Q96RT6 745 aa19.72■□□□□ 0.75
MAP1LC3B-208ENST00000570189 CDX2Q99626 313 aaPredicted RBP19.72■□□□□ 0.75
MAP1LC3B-208ENST00000570189 DOCK5Q9H7D0 1870 aa19.72■□□□□ 0.75
MAP1LC3B-208ENST00000570189 CYP2C9P11712 490 aa19.71■□□□□ 0.75
MAP1LC3B-208ENST00000570189 UBA1P22314 1058 aaKnown RBP19.71■□□□□ 0.75
MAP1LC3B-208ENST00000570189 CCL23P55773 120 aa19.71■□□□□ 0.75
MAP1LC3B-208ENST00000570189 MRPS9P82933 396 aaKnown RBP19.71■□□□□ 0.75
MAP1LC3B-208ENST00000570189 BFSP2Q13515 415 aa19.71■□□□□ 0.75
MAP1LC3B-208ENST00000570189 GNPTABQ3T906 1256 aa19.71■□□□□ 0.75
MAP1LC3B-208ENST00000570189 FAM47CQ5HY64 1035 aa19.71■□□□□ 0.75
MAP1LC3B-208ENST00000570189 PCNX4Q63HM2 1172 aa19.71■□□□□ 0.75
MAP1LC3B-208ENST00000570189 DHX32Q7L7V1 743 aaKnown RBP19.71■□□□□ 0.75
MAP1LC3B-208ENST00000570189 FCHSD1Q86WN1 690 aa19.71■□□□□ 0.75
MAP1LC3B-208ENST00000570189 TET1Q8NFU7 2136 aa19.71■□□□□ 0.75
MAP1LC3B-208ENST00000570189 CUL5Q93034 780 aa19.71■□□□□ 0.75
MAP1LC3B-208ENST00000570189 GTF2IRD1Q9UHL9 959 aa19.71■□□□□ 0.75
MAP1LC3B-208ENST00000570189 EYSQ5T1H1 3165 aa19.71■□□□□ 0.75
MAP1LC3B-208ENST00000570189 HMGB1P09429 215 aaKnown RBP19.7■□□□□ 0.74
MAP1LC3B-208ENST00000570189 SP2Q02086 613 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms