RNA–Protein interactions for RNA: ENST00000569983.5

PKD1-237, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 722 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-237ENST00000569983 ARHGAP1Q07960 439 aa23.31■■□□□ 1.32
PKD1-237ENST00000569983 ADCK5Q3MIX3 580 aa23.31■■□□□ 1.32
PKD1-237ENST00000569983 VSIG10LQ86VR7 867 aa23.31■■□□□ 1.32
PKD1-237ENST00000569983 AFG1LQ8WV93 481 aa23.31■■□□□ 1.32
PKD1-237ENST00000569983 TCEANC2Q96MN5 208 aa23.31■■□□□ 1.32
PKD1-237ENST00000569983 TRPV6Q9H1D0 765 aa23.31■■□□□ 1.32
PKD1-237ENST00000569983 DDX41Q9UJV9 622 aaKnown RBP23.31■■□□□ 1.32
PKD1-237ENST00000569983 CCND2P30279 289 aa23.3■■□□□ 1.32
PKD1-237ENST00000569983 TMEM199Q8N511 208 aa23.3■■□□□ 1.32
PKD1-237ENST00000569983 IL31RAQ8NI17 732 aa23.3■■□□□ 1.32
PKD1-237ENST00000569983 ALDH8A1Q9H2A2 487 aaPredicted RBP23.3■■□□□ 1.32
PKD1-237ENST00000569983 MMP3P08254 477 aa23.29■■□□□ 1.32
PKD1-237ENST00000569983 HMGB1P09429 215 aaKnown RBP23.29■■□□□ 1.32
PKD1-237ENST00000569983 PPIGQ13427 754 aaKnown RBP eCLIP23.29■■□□□ 1.324e-6■■□□□ 14.2
PKD1-237ENST00000569983 FAM47CQ5HY64 1035 aa23.29■■□□□ 1.32
PKD1-237ENST00000569983 KCNV1Q6PIU1 500 aa23.29■■□□□ 1.32
PKD1-237ENST00000569983 APOA5Q6Q788 366 aa23.29■■□□□ 1.32
PKD1-237ENST00000569983 TMTC3Q6ZXV5 915 aa23.29■■□□□ 1.32
PKD1-237ENST00000569983 CUL5Q93034 780 aa23.29■■□□□ 1.32
PKD1-237ENST00000569983 RNPC3Q96LT9 517 aaKnown RBP23.29■■□□□ 1.32
PKD1-237ENST00000569983 HIPK3Q9H422 1215 aa23.29■■□□□ 1.32
PKD1-237ENST00000569983 SCN10AQ9Y5Y9 1956 aa23.29■■□□□ 1.32
PKD1-237ENST00000569983 RGS20O76081 388 aa23.28■■□□□ 1.32
PKD1-237ENST00000569983 CYP2C18P33260 490 aa23.28■■□□□ 1.32
PKD1-237ENST00000569983 NBPF20Q3BBV1 942 aa23.28■■□□□ 1.32
PKD1-237ENST00000569983 CCDC82Q8N4S0 544 aa23.28■■□□□ 1.32
PKD1-237ENST00000569983 DEFB123Q8N688 67 aa23.28■■□□□ 1.32
PKD1-237ENST00000569983 SMARCC2Q8TAQ2 1214 aa23.28■■□□□ 1.32
PKD1-237ENST00000569983 EMID1Q96A84 441 aaPredicted RBP23.28■■□□□ 1.32
PKD1-237ENST00000569983 TRMT13Q9NUP7 481 aaKnown RBP23.28■■□□□ 1.32
PKD1-237ENST00000569983 ZBTB43O43298 467 aa23.27■■□□□ 1.32
PKD1-237ENST00000569983 REC8O95072 547 aa23.27■■□□□ 1.32
PKD1-237ENST00000569983 SUPT20HL2P0C7V6 817 aa23.27■■□□□ 1.32
PKD1-237ENST00000569983 CSF2RAP15509 400 aa23.27■■□□□ 1.32
PKD1-237ENST00000569983 HSPA4P34932 840 aa23.27■■□□□ 1.32
PKD1-237ENST00000569983 LAMC2Q13753 1193 aa23.27■■□□□ 1.32
PKD1-237ENST00000569983 NFRKBQ6P4R8 1299 aa23.27■■□□□ 1.32
PKD1-237ENST00000569983 Q7L0L9 218 aa23.27■■□□□ 1.32
PKD1-237ENST00000569983 DHX37Q8IY37 1157 aaKnown RBP23.27■■□□□ 1.32
PKD1-237ENST00000569983 KCNB2Q92953 911 aa23.27■■□□□ 1.32
PKD1-237ENST00000569983 RBM28Q9NW13 759 aaKnown RBP23.27■■□□□ 1.32
PKD1-237ENST00000569983 LAMA2P24043 3122 aaKnown RBP23.26■■□□□ 1.31
PKD1-237ENST00000569983 hCG_1642624A0A1W2PR95 340 aa23.26■■□□□ 1.31
PKD1-237ENST00000569983 PIK3CDO00329 1044 aa23.26■■□□□ 1.31
PKD1-237ENST00000569983 CASTP20810 708 aaKnown RBP23.26■■□□□ 1.31
PKD1-237ENST00000569983 CHMP4BP1P59074 171 aa23.26■■□□□ 1.31
PKD1-237ENST00000569983 FGD1P98174 961 aa23.26■■□□□ 1.31
PKD1-237ENST00000569983 DGKDQ16760 1214 aa23.26■■□□□ 1.31
PKD1-237ENST00000569983 RTN1Q16799 776 aa23.26■■□□□ 1.31
PKD1-237ENST00000569983 USP17L6PQ6QN14 398 aa23.26■■□□□ 1.31
PKD1-237ENST00000569983 ZFP91Q96JP5 570 aaPredicted RBP23.26■■□□□ 1.31
PKD1-237ENST00000569983 NOC4LQ9BVI4 516 aaKnown RBP23.26■■□□□ 1.31
PKD1-237ENST00000569983 BRPF3Q9ULD4 1205 aa23.26■■□□□ 1.31
PKD1-237ENST00000569983 FRMPD4Q14CM0 1322 aa23.26■■□□□ 1.31
PKD1-237ENST00000569983 TGFB3P10600 412 aa23.25■■□□□ 1.31
PKD1-237ENST00000569983 PPTC7Q8NI37 304 aa23.25■■□□□ 1.31
PKD1-237ENST00000569983 PPP1R13LQ8WUF5 828 aa23.25■■□□□ 1.31
PKD1-237ENST00000569983 JAKMIP1Q96N16 626 aaKnown RBP23.25■■□□□ 1.31
PKD1-237ENST00000569983 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.25■■□□□ 1.312e-6■■■■□ 21.8
PKD1-237ENST00000569983 PSTPIP2Q9H939 334 aa23.25■■□□□ 1.31
PKD1-237ENST00000569983 SNX14Q9Y5W7 946 aa23.25■■□□□ 1.31
PKD1-237ENST00000569983 UMODL1Q5DID0 1318 aa23.25■■□□□ 1.31
PKD1-237ENST00000569983 KLF18A0A0U1RQI7 1052 aa23.24■■□□□ 1.31
PKD1-237ENST00000569983 MEIS2O14770 477 aa23.24■■□□□ 1.31
PKD1-237ENST00000569983 STAM2O75886 525 aa23.24■■□□□ 1.31
PKD1-237ENST00000569983 PTPN11Q06124 597 aaPredicted RBP23.24■■□□□ 1.31
PKD1-237ENST00000569983 GNPTABQ3T906 1256 aa23.24■■□□□ 1.31
PKD1-237ENST00000569983 HEATR3Q7Z4Q2 680 aa23.24■■□□□ 1.31
PKD1-237ENST00000569983 PPP4R2Q9NY27 417 aa23.24■■□□□ 1.31
PKD1-237ENST00000569983 NAP1L2Q9ULW6 460 aaPredicted RBP23.24■■□□□ 1.31
PKD1-237ENST00000569983 GOLGA8AA7E2F4 631 aa23.23■■□□□ 1.31
PKD1-237ENST00000569983 GOLGA8BA8MQT2 603 aa23.23■■□□□ 1.31
PKD1-237ENST00000569983 GGPS1O95749 300 aa23.23■■□□□ 1.31
PKD1-237ENST00000569983 ACRP10323 421 aa23.23■■□□□ 1.31
PKD1-237ENST00000569983 CYP2C9P11712 490 aa23.23■■□□□ 1.31
PKD1-237ENST00000569983 CPA1P15085 419 aa23.23■■□□□ 1.31
PKD1-237ENST00000569983 UBA1P22314 1058 aaKnown RBP23.23■■□□□ 1.31
PKD1-237ENST00000569983 CCL23P55773 120 aa23.23■■□□□ 1.31
PKD1-237ENST00000569983 MRPS9P82933 396 aaKnown RBP23.23■■□□□ 1.31
PKD1-237ENST00000569983 SMAD3P84022 425 aaKnown RBP23.23■■□□□ 1.31
PKD1-237ENST00000569983 TMEM240Q5SV17 173 aa23.23■■□□□ 1.31
PKD1-237ENST00000569983 CELF3Q5SZQ8 465 aaKnown RBP23.23■■□□□ 1.31
PKD1-237ENST00000569983 MYSM1Q5VVJ2 828 aa23.23■■□□□ 1.31
PKD1-237ENST00000569983 PSRC1Q6PGN9 363 aaPredicted RBP23.23■■□□□ 1.31
PKD1-237ENST00000569983 BLOC1S2Q6QNY1 142 aa23.23■■□□□ 1.31
PKD1-237ENST00000569983 C16orf59Q7L2K0 433 aa23.23■■□□□ 1.31
PKD1-237ENST00000569983 SPATA33Q96N06 139 aa23.23■■□□□ 1.31
PKD1-237ENST00000569983 IL23AQ9NPF7 189 aa23.23■■□□□ 1.31
PKD1-237ENST00000569983 CNTNAP5Q8WYK1 1306 aa23.23■■□□□ 1.31
PKD1-237ENST00000569983 MYH7BA7E2Y1 1941 aa23.22■■□□□ 1.31
PKD1-237ENST00000569983 SORBS3O60504 671 aa23.22■■□□□ 1.31
PKD1-237ENST00000569983 RCAN1P53805 252 aa23.22■■□□□ 1.31
PKD1-237ENST00000569983 SP2Q02086 613 aa23.22■■□□□ 1.31
PKD1-237ENST00000569983 ERICH6BQ5W0A0 696 aa23.22■■□□□ 1.31
PKD1-237ENST00000569983 FAM109BQ6ICB4 259 aaPredicted RBP23.22■■□□□ 1.31
PKD1-237ENST00000569983 KAT2BQ92831 832 aa23.22■■□□□ 1.31
PKD1-237ENST00000569983 GPKOWQ92917 476 aaPredicted RBP eCLIP23.22■■□□□ 1.31
PKD1-237ENST00000569983 INPP4AQ96PE3 977 aaPredicted RBP23.22■■□□□ 1.31
PKD1-237ENST00000569983 WNT8AQ9H1J5 351 aa23.22■■□□□ 1.31
PKD1-237ENST00000569983 NOD1Q9Y239 953 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms