RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 GRIN2DO15399 1336 aa15.03■□□□□ -0
CNOT1-220ENST00000569916 PIK3CDO00329 1044 aa15.03■□□□□ -0
CNOT1-220ENST00000569916 MEIS2O14770 477 aa15.03■□□□□ -0
CNOT1-220ENST00000569916 RGS20O76081 388 aa15.03■□□□□ -0
CNOT1-220ENST00000569916 MYCLP12524 364 aaPredicted RBP15.03■□□□□ -0
CNOT1-220ENST00000569916 CDC27P30260 824 aa15.03■□□□□ -0
CNOT1-220ENST00000569916 CPT1AP50416 773 aa15.03■□□□□ -0
CNOT1-220ENST00000569916 PURAQ00577 322 aaKnown RBP15.03■□□□□ -0
CNOT1-220ENST00000569916 FAAP100Q0VG06 881 aa15.03■□□□□ -0
CNOT1-220ENST00000569916 LY6KQ17RY6 165 aa15.03■□□□□ -0
CNOT1-220ENST00000569916 USP17L6PQ6QN14 398 aa15.03■□□□□ -0
CNOT1-220ENST00000569916 VSIG10LQ86VR7 867 aa15.03■□□□□ -0
CNOT1-220ENST00000569916 SLC43A3Q8NBI5 491 aa15.03■□□□□ -0
CNOT1-220ENST00000569916 GPKOWQ92917 476 aaPredicted RBP eCLIP15.03■□□□□ -0
CNOT1-220ENST00000569916 VTI1AQ96AJ9 217 aa15.03■□□□□ -0
CNOT1-220ENST00000569916 A6NJR5 290 aa15.02■□□□□ -0
CNOT1-220ENST00000569916 DCDC2CA8MYV0 355 aa15.02■□□□□ -0
CNOT1-220ENST00000569916 KIAA0355O15063 1070 aa15.02■□□□□ -0
CNOT1-220ENST00000569916 ITGB8P26012 769 aa15.02■□□□□ -0
CNOT1-220ENST00000569916 CCND2P30279 289 aa15.02■□□□□ -0
CNOT1-220ENST00000569916 METAP2P50579 478 aaKnown RBP eCLIP15.02■□□□□ -0
CNOT1-220ENST00000569916 ARHGAP1Q07960 439 aa15.02■□□□□ -0
CNOT1-220ENST00000569916 ITGA7Q13683 1181 aa15.02■□□□□ -0
CNOT1-220ENST00000569916 WWC2Q6AWC2 1192 aa15.02■□□□□ -0
CNOT1-220ENST00000569916 FAM126BQ8IXS8 530 aa15.02■□□□□ -0
CNOT1-220ENST00000569916 SMARCC2Q8TAQ2 1214 aa15.02■□□□□ -0
CNOT1-220ENST00000569916 LBHD1Q9BQE6 289 aaPredicted RBP15.02■□□□□ -0
CNOT1-220ENST00000569916 UBE2OQ9C0C9 1292 aaKnown RBP15.02■□□□□ -0
CNOT1-220ENST00000569916 POLR3EQ9NVU0 708 aa15.02■□□□□ -0
CNOT1-220ENST00000569916 DDX41Q9UJV9 622 aaKnown RBP15.02■□□□□ -0
CNOT1-220ENST00000569916 NAP1L2Q9ULW6 460 aaPredicted RBP15.02■□□□□ -0
CNOT1-220ENST00000569916 MRVI1Q9Y6F6 885 aa15.02■□□□□ -0
CNOT1-220ENST00000569916 GH1P01241 217 aa15.01□□□□□ -0.01
CNOT1-220ENST00000569916 MYL3P08590 195 aa15.01□□□□□ -0.01
CNOT1-220ENST00000569916 PSMC6P62333 389 aa15.01□□□□□ -0.01
CNOT1-220ENST00000569916 TYW1BQ6NUM6 668 aa15.01□□□□□ -0.01
CNOT1-220ENST00000569916 RUFY3Q7L099 469 aa15.01□□□□□ -0.01
CNOT1-220ENST00000569916 HEATR3Q7Z4Q2 680 aa15.01□□□□□ -0.01
CNOT1-220ENST00000569916 TDHQ8IZJ6 230 aa15.01□□□□□ -0.01
CNOT1-220ENST00000569916 BADQ92934 168 aa15.01□□□□□ -0.01
CNOT1-220ENST00000569916 CUL5Q93034 780 aa15.01□□□□□ -0.01
CNOT1-220ENST00000569916 ZFP91Q96JP5 570 aaPredicted RBP15.01□□□□□ -0.01
CNOT1-220ENST00000569916 ZSWIM6Q9HCJ5 1215 aa15.01□□□□□ -0.01
CNOT1-220ENST00000569916 TBX21Q9UL17 535 aa15.01□□□□□ -0.01
CNOT1-220ENST00000569916 SLC34A2O95436 690 aa15□□□□□ -0.01
CNOT1-220ENST00000569916 CD4P01730 458 aa15□□□□□ -0.01
CNOT1-220ENST00000569916 MMP3P08254 477 aa15□□□□□ -0.01
CNOT1-220ENST00000569916 ADD1P35611 737 aaKnown RBP15□□□□□ -0.01
CNOT1-220ENST00000569916 EVCP57679 992 aa15□□□□□ -0.01
CNOT1-220ENST00000569916 MRPS9P82933 396 aaKnown RBP15□□□□□ -0.01
CNOT1-220ENST00000569916 TOB2Q14106 344 aaPredicted RBP15□□□□□ -0.01
CNOT1-220ENST00000569916 UBE2SQ16763 222 aa15□□□□□ -0.01
CNOT1-220ENST00000569916 BRDTQ58F21 947 aaPredicted RBP15□□□□□ -0.01
CNOT1-220ENST00000569916 AFG1LQ8WV93 481 aa15□□□□□ -0.01
CNOT1-220ENST00000569916 EMID1Q96A84 441 aaPredicted RBP15□□□□□ -0.01
CNOT1-220ENST00000569916 MTG1Q9BT17 334 aaPredicted RBP15□□□□□ -0.01
CNOT1-220ENST00000569916 TM6SF1Q9BZW5 370 aa15□□□□□ -0.01
CNOT1-220ENST00000569916 PSTPIP2Q9H939 334 aa15□□□□□ -0.01
CNOT1-220ENST00000569916 TMEM39AQ9NV64 488 aa15□□□□□ -0.01
CNOT1-220ENST00000569916 V9GY48 417 aaPredicted RBP15□□□□□ -0.01
CNOT1-220ENST00000569916 CCDC196A0A1B0GTZ2 297 aa14.99□□□□□ -0.01
CNOT1-220ENST00000569916 hCG_1984214I3L0E3 225 aa14.99□□□□□ -0.01
CNOT1-220ENST00000569916 TLR3O15455 904 aaKnown RBP14.99□□□□□ -0.01
CNOT1-220ENST00000569916 RAG1P15918 1043 aa14.99□□□□□ -0.01
CNOT1-220ENST00000569916 UBA1P22314 1058 aaKnown RBP14.99□□□□□ -0.01
CNOT1-220ENST00000569916 PCNX4Q63HM2 1172 aa14.99□□□□□ -0.01
CNOT1-220ENST00000569916 PPP1R18Q6NYC8 613 aa14.99□□□□□ -0.01
CNOT1-220ENST00000569916 KCNV1Q6PIU1 500 aa14.99□□□□□ -0.01
CNOT1-220ENST00000569916 ZNF713Q8N859 430 aaPredicted RBP14.99□□□□□ -0.01
CNOT1-220ENST00000569916 INPP4AQ96PE3 977 aaPredicted RBP14.99□□□□□ -0.01
CNOT1-220ENST00000569916 SEZ6LQ9BYH1 1024 aa14.99□□□□□ -0.01
CNOT1-220ENST00000569916 UPF3BQ9BZI7 483 aaKnown RBP14.99□□□□□ -0.01
CNOT1-220ENST00000569916 CYP46A1Q9Y6A2 500 aa14.99□□□□□ -0.01
CNOT1-220ENST00000569916 TANC1Q9C0D5 1861 aa14.99□□□□□ -0.01
CNOT1-220ENST00000569916 STXBP3O00186 592 aa14.98□□□□□ -0.01
CNOT1-220ENST00000569916 SOX1O00570 391 aaPredicted RBP14.98□□□□□ -0.01
CNOT1-220ENST00000569916 B4GALT4O60513 344 aa14.98□□□□□ -0.01
CNOT1-220ENST00000569916 KPNA6O60684 536 aa14.98□□□□□ -0.01
CNOT1-220ENST00000569916 STAM2O75886 525 aa14.98□□□□□ -0.01
CNOT1-220ENST00000569916 NAPAP54920 295 aa14.98□□□□□ -0.01
CNOT1-220ENST00000569916 SP2Q02086 613 aa14.98□□□□□ -0.01
CNOT1-220ENST00000569916 BARHL2Q9NY43 387 aa14.98□□□□□ -0.01
CNOT1-220ENST00000569916 GGPS1O95749 300 aa14.97□□□□□ -0.01
CNOT1-220ENST00000569916 TIMP1P01033 207 aa14.97□□□□□ -0.01
CNOT1-220ENST00000569916 TGFB3P10600 412 aa14.97□□□□□ -0.01
CNOT1-220ENST00000569916 PDIA3P30101 505 aaKnown RBP14.97□□□□□ -0.01
CNOT1-220ENST00000569916 ICAM3P32942 547 aa14.97□□□□□ -0.01
CNOT1-220ENST00000569916 SEMA3FQ13275 785 aa14.97□□□□□ -0.01
CNOT1-220ENST00000569916 LAMC2Q13753 1193 aa14.97□□□□□ -0.01
CNOT1-220ENST00000569916 NTRK3Q16288 839 aa14.97□□□□□ -0.01
CNOT1-220ENST00000569916 PFKFB3Q16875 520 aaPredicted RBP14.97□□□□□ -0.01
CNOT1-220ENST00000569916 GNPTABQ3T906 1256 aa14.97□□□□□ -0.01
CNOT1-220ENST00000569916 CELF3Q5SZQ8 465 aaKnown RBP14.97□□□□□ -0.01
CNOT1-220ENST00000569916 MYSM1Q5VVJ2 828 aa14.97□□□□□ -0.01
CNOT1-220ENST00000569916 XRRA1Q6P2D8 792 aa14.97□□□□□ -0.01
CNOT1-220ENST00000569916 DHX37Q8IY37 1157 aaKnown RBP14.97□□□□□ -0.01
CNOT1-220ENST00000569916 PPTC7Q8NI37 304 aa14.97□□□□□ -0.01
CNOT1-220ENST00000569916 TRPV6Q9H1D0 765 aa14.97□□□□□ -0.01
CNOT1-220ENST00000569916 ALDH8A1Q9H2A2 487 aaPredicted RBP14.97□□□□□ -0.01
CNOT1-220ENST00000569916 RIC8AQ9NPQ8 531 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms