RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 ARIH2O95376 493 aa15.89■□□□□ 0.13
HERPUD1-218ENST00000569569 SEC24BO95487 1268 aa15.89■□□□□ 0.13
HERPUD1-218ENST00000569569 CPT1AP50416 773 aa15.89■□□□□ 0.13
HERPUD1-218ENST00000569569 TRIM60Q495X7 471 aa15.89■□□□□ 0.13
HERPUD1-218ENST00000569569 BRDTQ58F21 947 aaPredicted RBP15.89■□□□□ 0.13
HERPUD1-218ENST00000569569 WWC2Q6AWC2 1192 aa15.89■□□□□ 0.13
HERPUD1-218ENST00000569569 KCNV1Q6PIU1 500 aa15.89■□□□□ 0.13
HERPUD1-218ENST00000569569 COPS5Q92905 334 aa15.89■□□□□ 0.13
HERPUD1-218ENST00000569569 IL17RAQ96F46 866 aa15.89■□□□□ 0.13
HERPUD1-218ENST00000569569 RBM27Q9P2N5 1060 aaKnown RBP15.89■□□□□ 0.13
HERPUD1-218ENST00000569569 ZMYND8Q9ULU4 1186 aaPredicted RBP15.89■□□□□ 0.13
HERPUD1-218ENST00000569569 FRMPD4Q14CM0 1322 aa15.89■□□□□ 0.13
HERPUD1-218ENST00000569569 DOCK5Q9H7D0 1870 aa15.88■□□□□ 0.13
HERPUD1-218ENST00000569569 PRPF3O43395 683 aaKnown RBP15.88■□□□□ 0.13
HERPUD1-218ENST00000569569 STAM2O75886 525 aa15.88■□□□□ 0.13
HERPUD1-218ENST00000569569 SYN1P17600 705 aa15.88■□□□□ 0.13
HERPUD1-218ENST00000569569 NAPAP54920 295 aa15.88■□□□□ 0.13
HERPUD1-218ENST00000569569 CCT2P78371 535 aaKnown RBP15.88■□□□□ 0.13
HERPUD1-218ENST00000569569 NTRK3Q16288 839 aa15.88■□□□□ 0.13
HERPUD1-218ENST00000569569 PFKFB3Q16875 520 aaPredicted RBP15.88■□□□□ 0.13
HERPUD1-218ENST00000569569 LY6KQ17RY6 165 aa15.88■□□□□ 0.13
HERPUD1-218ENST00000569569 PPP1R18Q6NYC8 613 aa15.88■□□□□ 0.13
HERPUD1-218ENST00000569569 CXCL17Q6UXB2 119 aa15.88■□□□□ 0.13
HERPUD1-218ENST00000569569 TEX2Q8IWB9 1127 aa15.88■□□□□ 0.13
HERPUD1-218ENST00000569569 IL31RAQ8NI17 732 aa15.88■□□□□ 0.13
HERPUD1-218ENST00000569569 ALDH8A1Q9H2A2 487 aaPredicted RBP15.88■□□□□ 0.13
HERPUD1-218ENST00000569569 FOXD4L1Q9NU39 408 aa15.88■□□□□ 0.13
HERPUD1-218ENST00000569569 POLR3EQ9NVU0 708 aa15.88■□□□□ 0.13
HERPUD1-218ENST00000569569 BARHL2Q9NY43 387 aa15.88■□□□□ 0.13
HERPUD1-218ENST00000569569 PRKAG2Q9UGJ0 569 aa15.88■□□□□ 0.13
HERPUD1-218ENST00000569569 DDX41Q9UJV9 622 aaKnown RBP15.88■□□□□ 0.13
HERPUD1-218ENST00000569569 MRVI1Q9Y6F6 885 aa15.88■□□□□ 0.13
HERPUD1-218ENST00000569569 SCN10AQ9Y5Y9 1956 aa15.87■□□□□ 0.13
HERPUD1-218ENST00000569569 A0A0U1RQG5 324 aaPredicted RBP15.87■□□□□ 0.13
HERPUD1-218ENST00000569569 STXBP3O00186 592 aa15.87■□□□□ 0.13
HERPUD1-218ENST00000569569 RGS20O76081 388 aa15.87■□□□□ 0.13
HERPUD1-218ENST00000569569 GH1P01241 217 aa15.87■□□□□ 0.13
HERPUD1-218ENST00000569569 TGFB3P10600 412 aa15.87■□□□□ 0.13
HERPUD1-218ENST00000569569 IFNAR1P17181 557 aa15.87■□□□□ 0.13
HERPUD1-218ENST00000569569 AKAP17AQ02040 695 aaKnown RBP15.87■□□□□ 0.13
HERPUD1-218ENST00000569569 TLE2Q04725 743 aa15.87■□□□□ 0.13
HERPUD1-218ENST00000569569 TYW1BQ6NUM6 668 aa15.87■□□□□ 0.13
HERPUD1-218ENST00000569569 XRRA1Q6P2D8 792 aa15.87■□□□□ 0.13
HERPUD1-218ENST00000569569 TOX2Q96NM4 488 aa15.87■□□□□ 0.13
HERPUD1-218ENST00000569569 RNF26Q9BY78 433 aaPredicted RBP15.87■□□□□ 0.13
HERPUD1-218ENST00000569569 SEZ6LQ9BYH1 1024 aa15.87■□□□□ 0.13
HERPUD1-218ENST00000569569 GLT8D2Q9H1C3 349 aa15.87■□□□□ 0.13
HERPUD1-218ENST00000569569 RIC8AQ9NPQ8 531 aa15.87■□□□□ 0.13
HERPUD1-218ENST00000569569 COLQQ9Y215 455 aaPredicted RBP15.87■□□□□ 0.13
HERPUD1-218ENST00000569569 MROH7Q68CQ1 1323 aa15.87■□□□□ 0.13
HERPUD1-218ENST00000569569 SMCO2A6NFE2 343 aa15.86■□□□□ 0.13
HERPUD1-218ENST00000569569 A6NJR5 290 aa15.86■□□□□ 0.13
HERPUD1-218ENST00000569569 SPDYE3A6NKU9 549 aa15.86■□□□□ 0.13
HERPUD1-218ENST00000569569 ARVCFO00192 962 aa15.86■□□□□ 0.13
HERPUD1-218ENST00000569569 KPNA6O60684 536 aa15.86■□□□□ 0.13
HERPUD1-218ENST00000569569 SCG2P13521 617 aa15.86■□□□□ 0.13
HERPUD1-218ENST00000569569 CDK7P50613 346 aa15.86■□□□□ 0.13
HERPUD1-218ENST00000569569 MRPS9P82933 396 aaKnown RBP15.86■□□□□ 0.13
HERPUD1-218ENST00000569569 UBE2SQ16763 222 aa15.86■□□□□ 0.13
HERPUD1-218ENST00000569569 GNPTABQ3T906 1256 aa15.86■□□□□ 0.13
HERPUD1-218ENST00000569569 C8orf34Q49A92 452 aa15.86■□□□□ 0.13
HERPUD1-218ENST00000569569 PCNX4Q63HM2 1172 aa15.86■□□□□ 0.13
HERPUD1-218ENST00000569569 CHRDL2Q6WN34 429 aa15.86■□□□□ 0.13
HERPUD1-218ENST00000569569 ANKRD33Q7Z3H0 272 aa15.86■□□□□ 0.13
HERPUD1-218ENST00000569569 PHKBQ93100 1093 aa15.86■□□□□ 0.13
HERPUD1-218ENST00000569569 ZFP91Q96JP5 570 aaPredicted RBP15.86■□□□□ 0.13
HERPUD1-218ENST00000569569 LARP6Q9BRS8 491 aaKnown RBP15.86■□□□□ 0.13
HERPUD1-218ENST00000569569 NCOA5Q9HCD5 579 aaKnown RBP15.86■□□□□ 0.13
HERPUD1-218ENST00000569569 PCDHA6Q9UN73 950 aa15.86■□□□□ 0.13
HERPUD1-218ENST00000569569 PCDHA8Q9Y5H6 950 aa15.86■□□□□ 0.13
HERPUD1-218ENST00000569569 LTBP2Q14767 1821 aa15.85■□□□□ 0.13
HERPUD1-218ENST00000569569 DCDC2CA8MYV0 355 aa15.85■□□□□ 0.13
HERPUD1-218ENST00000569569 PQBP1O60828 265 aaKnown RBP15.85■□□□□ 0.13
HERPUD1-218ENST00000569569 ADCY7P51828 1080 aa15.85■□□□□ 0.13
HERPUD1-218ENST00000569569 PURAQ00577 322 aaKnown RBP15.85■□□□□ 0.13
HERPUD1-218ENST00000569569 ARHGAP1Q07960 439 aa15.85■□□□□ 0.13
HERPUD1-218ENST00000569569 LAMC2Q13753 1193 aa15.85■□□□□ 0.13
HERPUD1-218ENST00000569569 ANKRD1Q15327 319 aa15.85■□□□□ 0.13
HERPUD1-218ENST00000569569 PKN1Q16512 942 aa15.85■□□□□ 0.13
HERPUD1-218ENST00000569569 EMID1Q96A84 441 aaPredicted RBP15.85■□□□□ 0.13
HERPUD1-218ENST00000569569 SLC26A6Q9BXS9 759 aa15.85■□□□□ 0.13
HERPUD1-218ENST00000569569 EHMT1Q9H9B1 1298 aa15.85■□□□□ 0.13
HERPUD1-218ENST00000569569 RTEL1Q9NZ71 1219 aa15.85■□□□□ 0.13
HERPUD1-218ENST00000569569 TRIOBPQ9H2D6 2365 aa15.85■□□□□ 0.13
HERPUD1-218ENST00000569569 KAT6AQ92794 2004 aa15.84■□□□□ 0.13
HERPUD1-218ENST00000569569 CPLX1O14810 134 aa15.84■□□□□ 0.13
HERPUD1-218ENST00000569569 FOSP01100 380 aaPredicted RBP15.84■□□□□ 0.13
HERPUD1-218ENST00000569569 MYL3P08590 195 aa15.84■□□□□ 0.13
HERPUD1-218ENST00000569569 CLTBP09497 229 aa15.84■□□□□ 0.13
HERPUD1-218ENST00000569569 ICAM3P32942 547 aa15.84■□□□□ 0.13
HERPUD1-218ENST00000569569 SSRP1Q08945 709 aaKnown RBP15.84■□□□□ 0.13
HERPUD1-218ENST00000569569 STK3Q13188 491 aa15.84■□□□□ 0.13
HERPUD1-218ENST00000569569 ITGA7Q13683 1181 aa15.84■□□□□ 0.13
HERPUD1-218ENST00000569569 CPLX2Q6PUV4 134 aaKnown RBP15.84■□□□□ 0.13
HERPUD1-218ENST00000569569 DHX37Q8IY37 1157 aaKnown RBP15.84■□□□□ 0.13
HERPUD1-218ENST00000569569 TRIM22Q8IYM9 498 aa15.84■□□□□ 0.13
HERPUD1-218ENST00000569569 SLC43A3Q8NBI5 491 aa15.84■□□□□ 0.13
HERPUD1-218ENST00000569569 CCDC12Q8WUD4 166 aaPredicted RBP15.84■□□□□ 0.13
HERPUD1-218ENST00000569569 AFG1LQ8WV93 481 aa15.84■□□□□ 0.13
HERPUD1-218ENST00000569569 INPP4AQ96PE3 977 aaPredicted RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms