RNA–Protein interactions for RNA: ENST00000569225.5

CHD9-219, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 1,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-219ENST00000569225 RARBP10826 455 aa10.4□□□□□ -0.75
CHD9-219ENST00000569225 CCND3P30281 292 aaPredicted RBP10.4□□□□□ -0.75
CHD9-219ENST00000569225 ZNF76P36508 570 aa10.4□□□□□ -0.75
CHD9-219ENST00000569225 ARHGAP4P98171 946 aa10.4□□□□□ -0.75
CHD9-219ENST00000569225 GUCY1B3Q02153 619 aa10.4□□□□□ -0.75
CHD9-219ENST00000569225 TTLL4Q14679 1199 aa10.4□□□□□ -0.75
CHD9-219ENST00000569225 NPY5RQ15761 445 aa10.4□□□□□ -0.75
CHD9-219ENST00000569225 CCDC144BQ3MJ40 725 aa10.4□□□□□ -0.75
CHD9-219ENST00000569225 LARP1BQ659C4 914 aaKnown RBP10.4□□□□□ -0.75
CHD9-219ENST00000569225 TRPV1Q8NER1 839 aa10.4□□□□□ -0.75
CHD9-219ENST00000569225 IL31RAQ8NI17 732 aa10.4□□□□□ -0.75
CHD9-219ENST00000569225 RASGRP4Q8TDF6 673 aa10.4□□□□□ -0.75
CHD9-219ENST00000569225 PGBD1Q96JS3 809 aa10.4□□□□□ -0.75
CHD9-219ENST00000569225 NAP1L4Q99733 375 aaKnown RBP10.4□□□□□ -0.75
CHD9-219ENST00000569225 KATNBL1Q9H079 304 aa10.4□□□□□ -0.75
CHD9-219ENST00000569225 PAK6Q9NQU5 681 aaPredicted RBP10.4□□□□□ -0.75
CHD9-219ENST00000569225 DDX20Q9UHI6 824 aaKnown RBP10.4□□□□□ -0.75
CHD9-219ENST00000569225 RBBP6Q7Z6E9 1792 aaKnown RBP10.39□□□□□ -0.75
CHD9-219ENST00000569225 RBM47A0AV96 593 aaKnown RBP10.39□□□□□ -0.75
CHD9-219ENST00000569225 M0R2N6 131 aa10.39□□□□□ -0.75
CHD9-219ENST00000569225 GJB1P08034 283 aa10.39□□□□□ -0.75
CHD9-219ENST00000569225 CYP3A4P08684 503 aa10.39□□□□□ -0.75
CHD9-219ENST00000569225 PDIA4P13667 645 aaKnown RBP10.39□□□□□ -0.75
CHD9-219ENST00000569225 ANP32AP39687 249 aaKnown RBP10.39□□□□□ -0.75
CHD9-219ENST00000569225 USP11P51784 963 aa10.39□□□□□ -0.75
CHD9-219ENST00000569225 TNFAIP2Q03169 654 aa10.39□□□□□ -0.75
CHD9-219ENST00000569225 MTFR1Q15390 333 aa10.39□□□□□ -0.75
CHD9-219ENST00000569225 SEPT14Q6ZU15 432 aa10.39□□□□□ -0.75
CHD9-219ENST00000569225 INPP4AQ96PE3 977 aaPredicted RBP10.39□□□□□ -0.75
CHD9-219ENST00000569225 WDR11Q9BZH6 1224 aa10.39□□□□□ -0.75
CHD9-219ENST00000569225 FOXP1Q9H334 677 aaPredicted RBP10.39□□□□□ -0.75
CHD9-219ENST00000569225 SPC25Q9HBM1 224 aa10.39□□□□□ -0.75
CHD9-219ENST00000569225 MRVI1Q9Y6F6 885 aa10.39□□□□□ -0.75
CHD9-219ENST00000569225 DDX49Q9Y6V7 483 aaKnown RBP10.39□□□□□ -0.75
CHD9-219ENST00000569225 MYH6P13533 1939 aa10.39□□□□□ -0.75
CHD9-219ENST00000569225 BTBD18B2RXH4 712 aa10.38□□□□□ -0.75
CHD9-219ENST00000569225 NKRFO15226 690 aaKnown RBP eCLIP10.38□□□□□ -0.75
CHD9-219ENST00000569225 FIBPO43427 364 aa10.38□□□□□ -0.75
CHD9-219ENST00000569225 TGFB3P10600 412 aa10.38□□□□□ -0.75
CHD9-219ENST00000569225 MRPS9P82933 396 aaKnown RBP10.38□□□□□ -0.75
CHD9-219ENST00000569225 CEP55Q53EZ4 464 aa10.38□□□□□ -0.75
CHD9-219ENST00000569225 TAPT1Q6NXT6 567 aa10.38□□□□□ -0.75
CHD9-219ENST00000569225 PIK3AP1Q6ZUJ8 805 aa10.38□□□□□ -0.75
CHD9-219ENST00000569225 OXER1Q8TDS5 423 aa10.38□□□□□ -0.75
CHD9-219ENST00000569225 TBCKQ8TEA7 893 aa10.38□□□□□ -0.75
CHD9-219ENST00000569225 GPRASP2Q96D09 838 aa10.38□□□□□ -0.75
CHD9-219ENST00000569225 DEFB118Q96PH6 123 aa10.38□□□□□ -0.75
CHD9-219ENST00000569225 FOXD4L1Q9NU39 408 aa10.38□□□□□ -0.75
CHD9-219ENST00000569225 MAFGO15525 162 aa10.38□□□□□ -0.75
CHD9-219ENST00000569225 DUSP11O75319 330 aaKnown RBP10.38□□□□□ -0.75
CHD9-219ENST00000569225 TXNP10599 105 aaKnown RBP10.38□□□□□ -0.75
CHD9-219ENST00000569225 ADCYAP1R1P41586 468 aa10.38□□□□□ -0.75
CHD9-219ENST00000569225 SETQ01105 290 aaPredicted RBP10.38□□□□□ -0.75
CHD9-219ENST00000569225 NR5A1Q13285 461 aa10.38□□□□□ -0.75
CHD9-219ENST00000569225 MTMR1Q13613 665 aa10.38□□□□□ -0.75
CHD9-219ENST00000569225 DUSP28Q4G0W2 176 aa10.38□□□□□ -0.75
CHD9-219ENST00000569225 MCTP1Q6DN14 999 aa10.38□□□□□ -0.75
CHD9-219ENST00000569225 NIPA1Q7RTP0 329 aa10.38□□□□□ -0.75
CHD9-219ENST00000569225 GIMAP8Q8ND71 665 aaPredicted RBP10.38□□□□□ -0.75
CHD9-219ENST00000569225 MXRA8Q9BRK3 442 aa10.38□□□□□ -0.75
CHD9-219ENST00000569225 AP5M1Q9H0R1 490 aa10.38□□□□□ -0.75
CHD9-219ENST00000569225 JADE2Q9NQC1 790 aa10.38□□□□□ -0.75
CHD9-219ENST00000569225 PDGFCQ9NRA1 345 aa10.38□□□□□ -0.75
CHD9-219ENST00000569225 RTEL1Q9NZ71 1219 aa10.38□□□□□ -0.75
CHD9-219ENST00000569225 Q9Y3F1 56 aa10.38□□□□□ -0.75
CHD9-219ENST00000569225 UBIAD1Q9Y5Z9 338 aa10.38□□□□□ -0.75
CHD9-219ENST00000569225 SPATA31C2B4DYI2 1134 aa10.37□□□□□ -0.75
CHD9-219ENST00000569225 ADAMTS3O15072 1205 aa10.37□□□□□ -0.75
CHD9-219ENST00000569225 GCFC2P16383 781 aaKnown RBP10.37□□□□□ -0.75
CHD9-219ENST00000569225 ITGB5P18084 799 aa10.37□□□□□ -0.75
CHD9-219ENST00000569225 ICAM3P32942 547 aa10.37□□□□□ -0.75
CHD9-219ENST00000569225 CIITAP33076 1130 aa10.37□□□□□ -0.75
CHD9-219ENST00000569225 INF2Q27J81 1249 aa10.37□□□□□ -0.75
CHD9-219ENST00000569225 BRDTQ58F21 947 aaPredicted RBP10.37□□□□□ -0.75
CHD9-219ENST00000569225 MOXD1Q6UVY6 613 aa10.37□□□□□ -0.75
CHD9-219ENST00000569225 NEK8Q86SG6 692 aa10.37□□□□□ -0.75
CHD9-219ENST00000569225 NOSTRINQ8IVI9 506 aa10.37□□□□□ -0.75
CHD9-219ENST00000569225 ARRDC4Q8NCT1 418 aa10.37□□□□□ -0.75
CHD9-219ENST00000569225 U2AF1L4Q8WU68 220 aaKnown RBP10.37□□□□□ -0.75
CHD9-219ENST00000569225 CRYGNQ8WXF5 182 aa10.37□□□□□ -0.75
CHD9-219ENST00000569225 TNFRSF25Q93038 417 aa10.37□□□□□ -0.75
CHD9-219ENST00000569225 XPNPEP3Q9NQH7 507 aa10.37□□□□□ -0.75
CHD9-219ENST00000569225 NOL7Q9UMY1 257 aaKnown RBP10.37□□□□□ -0.75
CHD9-219ENST00000569225 DOCK3Q8IZD9 2030 aa10.37□□□□□ -0.75
CHD9-219ENST00000569225 VPS37CA5D8V6 355 aaPredicted RBP10.36□□□□□ -0.75
CHD9-219ENST00000569225 MEIS1O00470 390 aa10.36□□□□□ -0.75
CHD9-219ENST00000569225 RGS20O76081 388 aa10.36□□□□□ -0.75
CHD9-219ENST00000569225 SGPL1O95470 568 aa10.36□□□□□ -0.75
CHD9-219ENST00000569225 GH1P01241 217 aa10.36□□□□□ -0.75
CHD9-219ENST00000569225 TFRCP02786 760 aaKnown RBP10.36□□□□□ -0.75
CHD9-219ENST00000569225 SMPD1P17405 629 aa10.36□□□□□ -0.75
CHD9-219ENST00000569225 U2AF2P26368 475 aaKnown RBP eCLIP10.36□□□□□ -0.75
CHD9-219ENST00000569225 GJA8P48165 433 aa10.36□□□□□ -0.75
CHD9-219ENST00000569225 NEDD9Q14511 834 aa10.36□□□□□ -0.75
CHD9-219ENST00000569225 CCDC62Q6P9F0 684 aa10.36□□□□□ -0.75
CHD9-219ENST00000569225 RNF180Q86T96 592 aa10.36□□□□□ -0.75
CHD9-219ENST00000569225 DDX41Q9UJV9 622 aaKnown RBP10.36□□□□□ -0.75
CHD9-219ENST00000569225 SMCHD1A6NHR9 2005 aa10.36□□□□□ -0.75
CHD9-219ENST00000569225 CYP3A7-CYP3A51PA0A087WV96 503 aa10.36□□□□□ -0.75
CHD9-219ENST00000569225 CCDC85CA6NKD9 419 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms