RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 C11orf84Q9BUA3 381 aaPredicted RBP10.24□□□□□ -0.77
SMG1-216ENST00000569122 DDX49Q9Y6V7 483 aaKnown RBP10.24□□□□□ -0.77
SMG1-216ENST00000569122 PARP14Q460N5 1801 aa10.23□□□□□ -0.77
SMG1-216ENST00000569122 GBF1Q92538 1859 aa10.23□□□□□ -0.77
SMG1-216ENST00000569122 RSPH10B2B2RC85 870 aa10.23□□□□□ -0.77
SMG1-216ENST00000569122 MBTPS2O43462 519 aa10.23□□□□□ -0.77
SMG1-216ENST00000569122 MMP3P08254 477 aa10.23□□□□□ -0.77
SMG1-216ENST00000569122 RSPH10BP0C881 870 aa10.23□□□□□ -0.77
SMG1-216ENST00000569122 CCDC96Q2M329 555 aa10.23□□□□□ -0.77
SMG1-216ENST00000569122 BTNL9Q6UXG8 535 aa10.23□□□□□ -0.77
SMG1-216ENST00000569122 RGS22Q8NE09 1264 aa10.23□□□□□ -0.77
SMG1-216ENST00000569122 AFG1LQ8WV93 481 aa10.23□□□□□ -0.77
SMG1-216ENST00000569122 SEPT8Q92599 483 aa10.23□□□□□ -0.77
SMG1-216ENST00000569122 DHX38Q92620 1227 aaKnown RBP10.23□□□□□ -0.77
SMG1-216ENST00000569122 TOP1MTQ969P6 601 aa10.23□□□□□ -0.77
SMG1-216ENST00000569122 PURBQ96QR8 312 aaKnown RBP10.23□□□□□ -0.77
SMG1-216ENST00000569122 PHOX2BQ99453 314 aa10.23□□□□□ -0.77
SMG1-216ENST00000569122 BCL11AQ9H165 835 aa10.23□□□□□ -0.77
SMG1-216ENST00000569122 CHMP4BQ9H444 224 aaKnown RBP10.23□□□□□ -0.77
SMG1-216ENST00000569122 CD207Q9UJ71 328 aa10.23□□□□□ -0.77
SMG1-216ENST00000569122 BRWD1Q9NSI6 2320 aa10.23□□□□□ -0.77
SMG1-216ENST00000569122 MYO5AQ9Y4I1 1855 aaKnown RBP10.22□□□□□ -0.77
SMG1-216ENST00000569122 TSPY2A6NKD2 308 aa10.22□□□□□ -0.77
SMG1-216ENST00000569122 NFIBO00712 420 aa10.22□□□□□ -0.77
SMG1-216ENST00000569122 CAND2O75155 1236 aa10.22□□□□□ -0.77
SMG1-216ENST00000569122 MS4A1P11836 297 aa10.22□□□□□ -0.77
SMG1-216ENST00000569122 SNAP25P60880 206 aa10.22□□□□□ -0.77
SMG1-216ENST00000569122 RPS6P62753 249 aaKnown RBP10.22□□□□□ -0.77
SMG1-216ENST00000569122 ZXDAP98168 799 aa10.22□□□□□ -0.77
SMG1-216ENST00000569122 TCF15Q12870 199 aa10.22□□□□□ -0.77
SMG1-216ENST00000569122 LAMC2Q13753 1193 aa10.22□□□□□ -0.77
SMG1-216ENST00000569122 ZNF618Q5T7W0 954 aa10.22□□□□□ -0.77
SMG1-216ENST00000569122 IER5LQ5T953 404 aa10.22□□□□□ -0.77
SMG1-216ENST00000569122 SYDE2Q5VT97 1194 aa10.22□□□□□ -0.77
SMG1-216ENST00000569122 CCDC62Q6P9F0 684 aa10.22□□□□□ -0.77
SMG1-216ENST00000569122 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.22□□□□□ -0.77
SMG1-216ENST00000569122 DHX37Q8IY37 1157 aaKnown RBP10.22□□□□□ -0.77
SMG1-216ENST00000569122 DBF4BQ8NFT6 615 aa10.22□□□□□ -0.77
SMG1-216ENST00000569122 APBB2Q92870 758 aa10.22□□□□□ -0.77
SMG1-216ENST00000569122 COPS5Q92905 334 aa10.22□□□□□ -0.77
SMG1-216ENST00000569122 IL17RAQ96F46 866 aa10.22□□□□□ -0.77
SMG1-216ENST00000569122 CTAGE1Q96RT6 745 aa10.22□□□□□ -0.77
SMG1-216ENST00000569122 HDAC6Q9UBN7 1215 aa10.22□□□□□ -0.77
SMG1-216ENST00000569122 PROB1E7EW31 1015 aa10.21□□□□□ -0.77
SMG1-216ENST00000569122 C5orf67F2Z3F1 127 aa10.21□□□□□ -0.77
SMG1-216ENST00000569122 RNF113AO15541 343 aaKnown RBP10.21□□□□□ -0.77
SMG1-216ENST00000569122 GPAA1O43292 621 aa10.21□□□□□ -0.77
SMG1-216ENST00000569122 LTBRP36941 435 aa10.21□□□□□ -0.77
SMG1-216ENST00000569122 PSEN2P49810 448 aa10.21□□□□□ -0.77
SMG1-216ENST00000569122 SIGLEC14Q08ET2 396 aa10.21□□□□□ -0.77
SMG1-216ENST00000569122 MFSD10Q14728 455 aa10.21□□□□□ -0.77
SMG1-216ENST00000569122 STXBP2Q15833 593 aa10.21□□□□□ -0.77
SMG1-216ENST00000569122 PLEKHG4Q58EX7 1191 aa10.21□□□□□ -0.77
SMG1-216ENST00000569122 IFNL3Q8IZI9 196 aa10.21□□□□□ -0.77
SMG1-216ENST00000569122 FIBCD1Q8N539 461 aa10.21□□□□□ -0.77
SMG1-216ENST00000569122 KBTBD3Q8NAB2 608 aa10.21□□□□□ -0.77
SMG1-216ENST00000569122 NSUN6Q8TEA1 469 aaKnown RBP10.21□□□□□ -0.77
SMG1-216ENST00000569122 PPP1R13LQ8WUF5 828 aa10.21□□□□□ -0.77
SMG1-216ENST00000569122 KAT2BQ92831 832 aa10.21□□□□□ -0.77
SMG1-216ENST00000569122 EMID1Q96A84 441 aaPredicted RBP10.21□□□□□ -0.77
SMG1-216ENST00000569122 GPATCH3Q96I76 525 aa10.21□□□□□ -0.77
SMG1-216ENST00000569122 IWS1Q96ST2 819 aa10.21□□□□□ -0.77
SMG1-216ENST00000569122 ALG1Q9BT22 464 aa10.21□□□□□ -0.77
SMG1-216ENST00000569122 NAPBQ9H115 298 aa10.21□□□□□ -0.77
SMG1-216ENST00000569122 FSD2A1L4K1 749 aa10.2□□□□□ -0.78
SMG1-216ENST00000569122 PPFIA4O75335 1185 aa10.2□□□□□ -0.78
SMG1-216ENST00000569122 EYA4O95677 639 aa10.2□□□□□ -0.78
SMG1-216ENST00000569122 F2P00734 622 aa10.2□□□□□ -0.78
SMG1-216ENST00000569122 CTNNB1P35222 781 aa10.2□□□□□ -0.78
SMG1-216ENST00000569122 BMPR1AP36894 532 aa10.2□□□□□ -0.78
SMG1-216ENST00000569122 THPOP40225 353 aa10.2□□□□□ -0.78
SMG1-216ENST00000569122 NDUFV1P49821 464 aa10.2□□□□□ -0.78
SMG1-216ENST00000569122 PPARAQ07869 468 aa10.2□□□□□ -0.78
SMG1-216ENST00000569122 ARHGAP1Q07960 439 aa10.2□□□□□ -0.78
SMG1-216ENST00000569122 HYAL1Q12794 435 aa10.2□□□□□ -0.78
SMG1-216ENST00000569122 KIAA0753Q2KHM9 967 aa10.2□□□□□ -0.78
SMG1-216ENST00000569122 TRIM71Q2Q1W2 868 aaKnown RBP10.2□□□□□ -0.78
SMG1-216ENST00000569122 KCNV1Q6PIU1 500 aa10.2□□□□□ -0.78
SMG1-216ENST00000569122 SLC30A10Q6XR72 485 aa10.2□□□□□ -0.78
SMG1-216ENST00000569122 CHST3Q7LGC8 479 aa10.2□□□□□ -0.78
SMG1-216ENST00000569122 WDR19Q8NEZ3 1342 aa10.2□□□□□ -0.78
SMG1-216ENST00000569122 PPTC7Q8NI37 304 aa10.2□□□□□ -0.78
SMG1-216ENST00000569122 CLEC4DQ8WXI8 215 aa10.2□□□□□ -0.78
SMG1-216ENST00000569122 ANKS1AQ92625 1134 aa10.2□□□□□ -0.78
SMG1-216ENST00000569122 OSBP2Q969R2 916 aa10.2□□□□□ -0.78
SMG1-216ENST00000569122 PLVAPQ9BX97 442 aa10.2□□□□□ -0.78
SMG1-216ENST00000569122 IFIH1Q9BYX4 1025 aaKnown RBP10.2□□□□□ -0.78
SMG1-216ENST00000569122 USP34Q70CQ2 3546 aa10.2□□□□□ -0.78
SMG1-216ENST00000569122 LOC730098B7Z3J9 87 aa10.19□□□□□ -0.78
SMG1-216ENST00000569122 HAS3O00219 553 aa10.19□□□□□ -0.78
SMG1-216ENST00000569122 EIF3JO75822 258 aaKnown RBP10.19□□□□□ -0.78
SMG1-216ENST00000569122 UPP2O95045 317 aa10.19□□□□□ -0.78
SMG1-216ENST00000569122 ARIH2O95376 493 aa10.19□□□□□ -0.78
SMG1-216ENST00000569122 CHGBP05060 677 aa10.19□□□□□ -0.78
SMG1-216ENST00000569122 GNAT1P11488 350 aa10.19□□□□□ -0.78
SMG1-216ENST00000569122 AVPR2P30518 371 aa10.19□□□□□ -0.78
SMG1-216ENST00000569122 MKRN4PQ13434 485 aaPredicted RBP10.19□□□□□ -0.78
SMG1-216ENST00000569122 CBX2Q14781 532 aaPredicted RBP10.19□□□□□ -0.78
SMG1-216ENST00000569122 CLUL1Q15846 466 aa10.19□□□□□ -0.78
SMG1-216ENST00000569122 LY6KQ17RY6 165 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms