RNA–Protein interactions for RNA: ENST00000569062.1

ABCA3-206, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 5

Gene ABCA3, Length 900 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-206ENST00000569062 CPA1P15085 419 aa23.27■■□□□ 1.32
ABCA3-206ENST00000569062 HSPA4P34932 840 aa23.27■■□□□ 1.32
ABCA3-206ENST00000569062 ARHGAP1Q07960 439 aa23.27■■□□□ 1.32
ABCA3-206ENST00000569062 BRDTQ58F21 947 aaPredicted RBP23.27■■□□□ 1.32
ABCA3-206ENST00000569062 TMTC3Q6ZXV5 915 aa23.27■■□□□ 1.32
ABCA3-206ENST00000569062 VSIG10LQ86VR7 867 aa23.27■■□□□ 1.32
ABCA3-206ENST00000569062 MTG1Q9BT17 334 aaPredicted RBP23.27■■□□□ 1.32
ABCA3-206ENST00000569062 PPP1R12CQ9BZL4 782 aa23.27■■□□□ 1.32
ABCA3-206ENST00000569062 PPP4R2Q9NY27 417 aa23.27■■□□□ 1.32
ABCA3-206ENST00000569062 DDX41Q9UJV9 622 aaKnown RBP23.27■■□□□ 1.32
ABCA3-206ENST00000569062 B4GALT4O60513 344 aa23.26■■□□□ 1.31
ABCA3-206ENST00000569062 GH1P01241 217 aa23.26■■□□□ 1.31
ABCA3-206ENST00000569062 FPGSQ05932 587 aa23.26■■□□□ 1.31
ABCA3-206ENST00000569062 SYNE3Q6ZMZ3 975 aa23.26■■□□□ 1.31
ABCA3-206ENST00000569062 PPP1R13LQ8WUF5 828 aa23.26■■□□□ 1.31
ABCA3-206ENST00000569062 AFG1LQ8WV93 481 aa23.26■■□□□ 1.31
ABCA3-206ENST00000569062 TRPV6Q9H1D0 765 aa23.26■■□□□ 1.31
ABCA3-206ENST00000569062 SNX14Q9Y5W7 946 aa23.26■■□□□ 1.31
ABCA3-206ENST00000569062 MRVI1Q9Y6F6 885 aa23.26■■□□□ 1.31
ABCA3-206ENST00000569062 MFSD5Q6N075 450 aa23.25■■□□□ 1.31
ABCA3-206ENST00000569062 USP17L6PQ6QN14 398 aa23.25■■□□□ 1.31
ABCA3-206ENST00000569062 SEZ6LQ9BYH1 1024 aa23.25■■□□□ 1.31
ABCA3-206ENST00000569062 MEIS2O14770 477 aa23.24■■□□□ 1.31
ABCA3-206ENST00000569062 MMP3P08254 477 aa23.24■■□□□ 1.31
ABCA3-206ENST00000569062 HMGB1P09429 215 aaKnown RBP23.24■■□□□ 1.31
ABCA3-206ENST00000569062 CCND2P30279 289 aa23.24■■□□□ 1.31
ABCA3-206ENST00000569062 JAKMIP1Q96N16 626 aaKnown RBP23.24■■□□□ 1.31
ABCA3-206ENST00000569062 ALDH8A1Q9H2A2 487 aaPredicted RBP23.24■■□□□ 1.31
ABCA3-206ENST00000569062 KLF18A0A0U1RQI7 1052 aa23.23■■□□□ 1.31
ABCA3-206ENST00000569062 ZBTB43O43298 467 aa23.23■■□□□ 1.31
ABCA3-206ENST00000569062 KPNA6O60684 536 aa23.23■■□□□ 1.31
ABCA3-206ENST00000569062 REC8O95072 547 aa23.23■■□□□ 1.31
ABCA3-206ENST00000569062 NBPF20Q3BBV1 942 aa23.23■■□□□ 1.31
ABCA3-206ENST00000569062 SMARCC2Q8TAQ2 1214 aa23.23■■□□□ 1.31
ABCA3-206ENST00000569062 GPKOWQ92917 476 aaPredicted RBP eCLIP23.23■■□□□ 1.31
ABCA3-206ENST00000569062 FRMPD4Q14CM0 1322 aa23.23■■□□□ 1.31
ABCA3-206ENST00000569062 UMODL1Q5DID0 1318 aa23.23■■□□□ 1.31
ABCA3-206ENST00000569062 CNTNAP5Q8WYK1 1306 aa23.23■■□□□ 1.31
ABCA3-206ENST00000569062 DOCK5Q9H7D0 1870 aa23.22■■□□□ 1.31
ABCA3-206ENST00000569062 CYP2C18P33260 490 aa23.22■■□□□ 1.31
ABCA3-206ENST00000569062 MRPS9P82933 396 aaKnown RBP23.22■■□□□ 1.31
ABCA3-206ENST00000569062 CUL5Q93034 780 aa23.22■■□□□ 1.31
ABCA3-206ENST00000569062 TRMT13Q9NUP7 481 aaKnown RBP23.22■■□□□ 1.31
ABCA3-206ENST00000569062 RBM28Q9NW13 759 aaKnown RBP23.22■■□□□ 1.31
ABCA3-206ENST00000569062 PIK3CDO00329 1044 aa23.21■■□□□ 1.31
ABCA3-206ENST00000569062 SORBS3O60504 671 aa23.21■■□□□ 1.31
ABCA3-206ENST00000569062 CSF2RAP15509 400 aa23.21■■□□□ 1.31
ABCA3-206ENST00000569062 SP2Q02086 613 aa23.21■■□□□ 1.31
ABCA3-206ENST00000569062 RTN1Q16799 776 aa23.21■■□□□ 1.31
ABCA3-206ENST00000569062 FAM47CQ5HY64 1035 aa23.21■■□□□ 1.31
ABCA3-206ENST00000569062 ERICH6BQ5W0A0 696 aa23.21■■□□□ 1.31
ABCA3-206ENST00000569062 GPR153Q6NV75 609 aa23.21■■□□□ 1.31
ABCA3-206ENST00000569062 Q6ZUG5 572 aa23.21■■□□□ 1.31
ABCA3-206ENST00000569062 Q7L0L9 218 aa23.21■■□□□ 1.31
ABCA3-206ENST00000569062 DHX37Q8IY37 1157 aaKnown RBP23.21■■□□□ 1.31
ABCA3-206ENST00000569062 EMID1Q96A84 441 aaPredicted RBP23.21■■□□□ 1.31
ABCA3-206ENST00000569062 HIPK3Q9H422 1215 aa23.21■■□□□ 1.31
ABCA3-206ENST00000569062 GOLGA8AA7E2F4 631 aa23.2■■□□□ 1.3
ABCA3-206ENST00000569062 GOLGA8BA8MQT2 603 aa23.2■■□□□ 1.3
ABCA3-206ENST00000569062 CDC27P30260 824 aa23.2■■□□□ 1.3
ABCA3-206ENST00000569062 CHMP4BP1P59074 171 aa23.2■■□□□ 1.3
ABCA3-206ENST00000569062 FGD1P98174 961 aa23.2■■□□□ 1.3
ABCA3-206ENST00000569062 APOBRQ0VD83 1088 aa23.2■■□□□ 1.3
ABCA3-206ENST00000569062 FUT2Q10981 343 aa23.2■■□□□ 1.3
ABCA3-206ENST00000569062 LAMC2Q13753 1193 aa23.2■■□□□ 1.3
ABCA3-206ENST00000569062 KCNV1Q6PIU1 500 aa23.2■■□□□ 1.3
ABCA3-206ENST00000569062 BLOC1S2Q6QNY1 142 aa23.2■■□□□ 1.3
ABCA3-206ENST00000569062 C16orf59Q7L2K0 433 aa23.2■■□□□ 1.3
ABCA3-206ENST00000569062 TMEM199Q8N511 208 aa23.2■■□□□ 1.3
ABCA3-206ENST00000569062 PSTPIP2Q9H939 334 aa23.2■■□□□ 1.3
ABCA3-206ENST00000569062 FAM217BQ9NTX9 383 aaPredicted RBP23.2■■□□□ 1.3
ABCA3-206ENST00000569062 RTEL1Q9NZ71 1219 aa23.2■■□□□ 1.3
ABCA3-206ENST00000569062 NAP1L2Q9ULW6 460 aaPredicted RBP23.2■■□□□ 1.3
ABCA3-206ENST00000569062 GGPS1O95749 300 aa23.19■■□□□ 1.3
ABCA3-206ENST00000569062 CYP2C9P11712 490 aa23.19■■□□□ 1.3
ABCA3-206ENST00000569062 UBA1P22314 1058 aaKnown RBP23.19■■□□□ 1.3
ABCA3-206ENST00000569062 MYSM1Q5VVJ2 828 aa23.19■■□□□ 1.3
ABCA3-206ENST00000569062 NFRKBQ6P4R8 1299 aa23.19■■□□□ 1.3
ABCA3-206ENST00000569062 HEATR3Q7Z4Q2 680 aa23.19■■□□□ 1.3
ABCA3-206ENST00000569062 KAT2BQ92831 832 aa23.19■■□□□ 1.3
ABCA3-206ENST00000569062 RNPC3Q96LT9 517 aaKnown RBP23.19■■□□□ 1.3
ABCA3-206ENST00000569062 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.19■■□□□ 1.3
ABCA3-206ENST00000569062 NOC4LQ9BVI4 516 aaKnown RBP23.19■■□□□ 1.3
ABCA3-206ENST00000569062 ACRP10323 421 aa23.18■■□□□ 1.3
ABCA3-206ENST00000569062 TGFB3P10600 412 aa23.18■■□□□ 1.3
ABCA3-206ENST00000569062 CASTP20810 708 aaKnown RBP23.18■■□□□ 1.3
ABCA3-206ENST00000569062 RPS6KB1P23443 525 aa23.18■■□□□ 1.3
ABCA3-206ENST00000569062 CCL23P55773 120 aa23.18■■□□□ 1.3
ABCA3-206ENST00000569062 PPIGQ13427 754 aaKnown RBP eCLIP23.18■■□□□ 1.3
ABCA3-206ENST00000569062 DGKDQ16760 1214 aa23.18■■□□□ 1.3
ABCA3-206ENST00000569062 UBE2SQ16763 222 aa23.18■■□□□ 1.3
ABCA3-206ENST00000569062 CELF3Q5SZQ8 465 aaKnown RBP23.18■■□□□ 1.3
ABCA3-206ENST00000569062 WWC2Q6AWC2 1192 aa23.18■■□□□ 1.3
ABCA3-206ENST00000569062 DEFB123Q8N688 67 aa23.18■■□□□ 1.3
ABCA3-206ENST00000569062 PPTC7Q8NI37 304 aa23.18■■□□□ 1.3
ABCA3-206ENST00000569062 BRF1Q92994 677 aa23.18■■□□□ 1.3
ABCA3-206ENST00000569062 WNT8AQ9H1J5 351 aa23.18■■□□□ 1.3
ABCA3-206ENST00000569062 BCAS3Q9H6U6 928 aa23.18■■□□□ 1.3
ABCA3-206ENST00000569062 CENPBP07199 599 aaPredicted RBP23.17■■□□□ 1.3
ABCA3-206ENST00000569062 HSDL1Q3SXM5 330 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms