RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 GTF2IRD1Q9UHL9 959 aa14.67□□□□□ -0.06
SNX29-207ENST00000568949 CTNNA3Q9UI47 895 aa14.67□□□□□ -0.06
SNX29-207ENST00000568949 GRXCR2A6NFK2 248 aa14.66□□□□□ -0.06
SNX29-207ENST00000568949 PDHBP11177 359 aa14.66□□□□□ -0.06
SNX29-207ENST00000568949 IL9P15248 144 aa14.66□□□□□ -0.06
SNX29-207ENST00000568949 ARHGAP1Q07960 439 aa14.66□□□□□ -0.06
SNX29-207ENST00000568949 PTK7Q13308 1070 aa14.66□□□□□ -0.06
SNX29-207ENST00000568949 CSPP1Q1MSJ5 1256 aa14.66□□□□□ -0.06
SNX29-207ENST00000568949 TCTN1Q2MV58 587 aa14.66□□□□□ -0.06
SNX29-207ENST00000568949 PI4K2BQ8TCG2 481 aa14.66□□□□□ -0.06
SNX29-207ENST00000568949 INSL6Q9Y581 213 aa14.66□□□□□ -0.06
SNX29-207ENST00000568949 KIAA1217Q5T5P2 1943 aa14.66□□□□□ -0.06
SNX29-207ENST00000568949 ZNF543Q08ER8 600 aa14.65□□□□□ -0.06
SNX29-207ENST00000568949 ALX1Q15699 326 aa14.65□□□□□ -0.06
SNX29-207ENST00000568949 DGKDQ16760 1214 aa14.65□□□□□ -0.06
SNX29-207ENST00000568949 PTPROQ16827 1216 aa14.65□□□□□ -0.06
SNX29-207ENST00000568949 C7orf31Q8N865 590 aa14.65□□□□□ -0.06
SNX29-207ENST00000568949 FBXO22Q8NEZ5 403 aa14.65□□□□□ -0.06
SNX29-207ENST00000568949 NEK9Q8TD19 979 aa14.65□□□□□ -0.06
SNX29-207ENST00000568949 MRPL38Q96DV4 380 aaKnown RBP14.65□□□□□ -0.06
SNX29-207ENST00000568949 TTC14Q96N46 770 aa14.65□□□□□ -0.06
SNX29-207ENST00000568949 SAMD11Q96NU1 681 aa14.65□□□□□ -0.06
SNX29-207ENST00000568949 KATNAL1Q9BW62 490 aa14.65□□□□□ -0.06
SNX29-207ENST00000568949 HDAC6Q9UBN7 1215 aa14.65□□□□□ -0.06
SNX29-207ENST00000568949 MICAL3Q7RTP6 2002 aa14.65□□□□□ -0.06
SNX29-207ENST00000568949 POTEB3A0JP26 581 aa14.64□□□□□ -0.07
SNX29-207ENST00000568949 DCXO43602 365 aa14.64□□□□□ -0.07
SNX29-207ENST00000568949 SNHG28P0DPA3 235 aa14.64□□□□□ -0.07
SNX29-207ENST00000568949 PSEN2P49810 448 aa14.64□□□□□ -0.07
SNX29-207ENST00000568949 MRE11P49959 708 aa14.64□□□□□ -0.07
SNX29-207ENST00000568949 LY6KQ17RY6 165 aa14.64□□□□□ -0.07
SNX29-207ENST00000568949 TRIM71Q2Q1W2 868 aaKnown RBP14.64□□□□□ -0.07
SNX29-207ENST00000568949 TRAF7Q6Q0C0 670 aa14.64□□□□□ -0.07
SNX29-207ENST00000568949 POTEBQ6S5H4 581 aa14.64□□□□□ -0.07
SNX29-207ENST00000568949 SEPT14Q6ZU15 432 aa14.64□□□□□ -0.07
SNX29-207ENST00000568949 SP7Q8TDD2 431 aaPredicted RBP14.64□□□□□ -0.07
SNX29-207ENST00000568949 NSUN6Q8TEA1 469 aaKnown RBP14.64□□□□□ -0.07
SNX29-207ENST00000568949 EMID1Q96A84 441 aaPredicted RBP14.64□□□□□ -0.07
SNX29-207ENST00000568949 UIMC1Q96RL1 719 aa14.64□□□□□ -0.07
SNX29-207ENST00000568949 IWS1Q96ST2 819 aa14.64□□□□□ -0.07
SNX29-207ENST00000568949 C17orf80Q9BSJ5 609 aa14.64□□□□□ -0.07
SNX29-207ENST00000568949 EMSYQ7Z589 1322 aa14.64□□□□□ -0.07
SNX29-207ENST00000568949 HAS3O00219 553 aa14.63□□□□□ -0.07
SNX29-207ENST00000568949 LGR5O75473 907 aa14.63□□□□□ -0.07
SNX29-207ENST00000568949 F2P00734 622 aa14.63□□□□□ -0.07
SNX29-207ENST00000568949 AMHP03971 560 aa14.63□□□□□ -0.07
SNX29-207ENST00000568949 HTRA4P83105 476 aaPredicted RBP14.63□□□□□ -0.07
SNX29-207ENST00000568949 NHLH1Q02575 133 aa14.63□□□□□ -0.07
SNX29-207ENST00000568949 MKRN4PQ13434 485 aaPredicted RBP14.63□□□□□ -0.07
SNX29-207ENST00000568949 MBTPS1Q14703 1052 aa14.63□□□□□ -0.07
SNX29-207ENST00000568949 TIGD5Q53EQ6 642 aa14.63□□□□□ -0.07
SNX29-207ENST00000568949 ZNF618Q5T7W0 954 aa14.63□□□□□ -0.07
SNX29-207ENST00000568949 VPS53Q5VIR6 699 aa14.63□□□□□ -0.07
SNX29-207ENST00000568949 FAM117BQ6P1L5 589 aa14.63□□□□□ -0.07
SNX29-207ENST00000568949 TOMM22Q9NS69 142 aa14.63□□□□□ -0.07
SNX29-207ENST00000568949 PRKAG3Q9UGI9 489 aa14.63□□□□□ -0.07
SNX29-207ENST00000568949 FAM50BQ9Y247 325 aa14.63□□□□□ -0.07
SNX29-207ENST00000568949 ZNF318Q5VUA4 2279 aa14.62□□□□□ -0.07
SNX29-207ENST00000568949 LAMC2Q13753 1193 aa14.62□□□□□ -0.07
SNX29-207ENST00000568949 MFSD10Q14728 455 aa14.62□□□□□ -0.07
SNX29-207ENST00000568949 COL19A1Q14993 1142 aa14.62□□□□□ -0.07
SNX29-207ENST00000568949 STXBP2Q15833 593 aa14.62□□□□□ -0.07
SNX29-207ENST00000568949 USH1GQ495M9 461 aa14.62□□□□□ -0.07
SNX29-207ENST00000568949 RRP12Q5JTH9 1297 aaKnown RBP14.62□□□□□ -0.07
SNX29-207ENST00000568949 GPATCH4Q5T3I0 446 aaKnown RBP14.62□□□□□ -0.07
SNX29-207ENST00000568949 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.62□□□□□ -0.07
SNX29-207ENST00000568949 CHST3Q7LGC8 479 aa14.62□□□□□ -0.07
SNX29-207ENST00000568949 PPTC7Q8NI37 304 aa14.62□□□□□ -0.07
SNX29-207ENST00000568949 SYTL5Q8TDW5 730 aaPredicted RBP14.62□□□□□ -0.07
SNX29-207ENST00000568949 PABPC5Q96DU9 382 aaKnown RBP14.62□□□□□ -0.07
SNX29-207ENST00000568949 TAAR1Q96RJ0 339 aa14.62□□□□□ -0.07
SNX29-207ENST00000568949 ALG1Q9BT22 464 aa14.62□□□□□ -0.07
SNX29-207ENST00000568949 DDX41Q9UJV9 622 aaKnown RBP14.62□□□□□ -0.07
SNX29-207ENST00000568949 ABCB11O95342 1321 aa14.62□□□□□ -0.07
SNX29-207ENST00000568949 MYO7AQ13402 2215 aa14.61□□□□□ -0.07
SNX29-207ENST00000568949 MYH7BA7E2Y1 1941 aa14.61□□□□□ -0.07
SNX29-207ENST00000568949 EIF3JO75822 258 aaKnown RBP14.61□□□□□ -0.07
SNX29-207ENST00000568949 PCP11498 1178 aaKnown RBP14.61□□□□□ -0.07
SNX29-207ENST00000568949 KIAA0753Q2KHM9 967 aa14.61□□□□□ -0.07
SNX29-207ENST00000568949 EPC2Q52LR7 807 aa14.61□□□□□ -0.07
SNX29-207ENST00000568949 MCF2L2Q86YR7 1114 aa14.61□□□□□ -0.07
SNX29-207ENST00000568949 MYOCDQ8IZQ8 938 aa14.61□□□□□ -0.07
SNX29-207ENST00000568949 BANK1Q8NDB2 785 aa14.61□□□□□ -0.07
SNX29-207ENST00000568949 DBF4BQ8NFT6 615 aa14.61□□□□□ -0.07
SNX29-207ENST00000568949 WNT8BQ93098 351 aa14.61□□□□□ -0.07
SNX29-207ENST00000568949 FBXL18Q96ME1 805 aa14.61□□□□□ -0.07
SNX29-207ENST00000568949 RMDN3Q96TC7 470 aa14.61□□□□□ -0.07
SNX29-207ENST00000568949 RCAN3Q9UKA8 241 aa14.61□□□□□ -0.07
SNX29-207ENST00000568949 C19orf67A6NJJ6 358 aa14.6□□□□□ -0.07
SNX29-207ENST00000568949 H3BNC9 293 aa14.6□□□□□ -0.07
SNX29-207ENST00000568949 H3BQ06 376 aaPredicted RBP14.6□□□□□ -0.07
SNX29-207ENST00000568949 PPFIA4O75335 1185 aa14.6□□□□□ -0.07
SNX29-207ENST00000568949 FGAP02671 866 aa14.6□□□□□ -0.07
SNX29-207ENST00000568949 HOXD8P13378 290 aaPredicted RBP14.6□□□□□ -0.07
SNX29-207ENST00000568949 ZP2Q05996 745 aa14.6□□□□□ -0.07
SNX29-207ENST00000568949 PLEKHG4Q58EX7 1191 aa14.6□□□□□ -0.07
SNX29-207ENST00000568949 C20orf194Q5TEA3 1177 aa14.6□□□□□ -0.07
SNX29-207ENST00000568949 DIEXFQ68CQ4 756 aaKnown RBP14.6□□□□□ -0.07
SNX29-207ENST00000568949 TBC1D5Q92609 795 aa14.6□□□□□ -0.07
SNX29-207ENST00000568949 UPF3BQ9BZI7 483 aaKnown RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms