RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 SNHG28P0DPA3 235 aa13.85□□□□□ -0.19
GTF3C1-209ENST00000568569 SSTR3P32745 418 aaPredicted RBP13.85□□□□□ -0.19
GTF3C1-209ENST00000568569 ALX1Q15699 326 aa13.85□□□□□ -0.19
GTF3C1-209ENST00000568569 DGKDQ16760 1214 aa13.85□□□□□ -0.19
GTF3C1-209ENST00000568569 LY6KQ17RY6 165 aa13.85□□□□□ -0.19
GTF3C1-209ENST00000568569 USH1GQ495M9 461 aa13.85□□□□□ -0.19
GTF3C1-209ENST00000568569 SEPT14Q6ZU15 432 aa13.85□□□□□ -0.19
GTF3C1-209ENST00000568569 C7orf31Q8N865 590 aa13.85□□□□□ -0.19
GTF3C1-209ENST00000568569 TTC14Q96N46 770 aa13.85□□□□□ -0.19
GTF3C1-209ENST00000568569 MAF1Q9H063 256 aa13.85□□□□□ -0.19
GTF3C1-209ENST00000568569 F2P00734 622 aa13.84□□□□□ -0.19
GTF3C1-209ENST00000568569 ALADP13716 330 aa13.84□□□□□ -0.19
GTF3C1-209ENST00000568569 MX1P20591 662 aa13.84□□□□□ -0.19
GTF3C1-209ENST00000568569 PTK7Q13308 1070 aa13.84□□□□□ -0.19
GTF3C1-209ENST00000568569 TCTN1Q2MV58 587 aa13.84□□□□□ -0.19
GTF3C1-209ENST00000568569 GPATCH4Q5T3I0 446 aaKnown RBP13.84□□□□□ -0.19
GTF3C1-209ENST00000568569 PTCRAQ6ISU1 281 aaPredicted RBP13.84□□□□□ -0.19
GTF3C1-209ENST00000568569 CHST3Q7LGC8 479 aa13.84□□□□□ -0.19
GTF3C1-209ENST00000568569 FBXO22Q8NEZ5 403 aa13.84□□□□□ -0.19
GTF3C1-209ENST00000568569 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.84□□□□□ -0.19
GTF3C1-209ENST00000568569 OTUD7AQ8TE49 926 aaPredicted RBP13.84□□□□□ -0.19
GTF3C1-209ENST00000568569 NSUN6Q8TEA1 469 aaKnown RBP13.84□□□□□ -0.19
GTF3C1-209ENST00000568569 EMID1Q96A84 441 aaPredicted RBP13.84□□□□□ -0.19
GTF3C1-209ENST00000568569 HDAC6Q9UBN7 1215 aa13.84□□□□□ -0.19
GTF3C1-209ENST00000568569 CTNNA3Q9UI47 895 aa13.84□□□□□ -0.19
GTF3C1-209ENST00000568569 INSL6Q9Y581 213 aa13.84□□□□□ -0.19
GTF3C1-209ENST00000568569 WDFY4Q6ZS81 3184 aa13.83□□□□□ -0.19
GTF3C1-209ENST00000568569 FGAP02671 866 aa13.83□□□□□ -0.2
GTF3C1-209ENST00000568569 PCP11498 1178 aaKnown RBP13.83□□□□□ -0.2
GTF3C1-209ENST00000568569 IL9P15248 144 aa13.83□□□□□ -0.2
GTF3C1-209ENST00000568569 PSEN2P49810 448 aa13.83□□□□□ -0.2
GTF3C1-209ENST00000568569 STXBP2Q15833 593 aa13.83□□□□□ -0.2
GTF3C1-209ENST00000568569 PTPROQ16827 1216 aa13.83□□□□□ -0.2
GTF3C1-209ENST00000568569 PUS10Q3MIT2 529 aaKnown RBP13.83□□□□□ -0.2
GTF3C1-209ENST00000568569 FAM117BQ6P1L5 589 aa13.83□□□□□ -0.2
GTF3C1-209ENST00000568569 ALYREFQ86V81 257 aaKnown RBP13.83□□□□□ -0.2
GTF3C1-209ENST00000568569 MIER1Q8N108 512 aa13.83□□□□□ -0.2
GTF3C1-209ENST00000568569 SYTL5Q8TDW5 730 aaPredicted RBP13.83□□□□□ -0.2
GTF3C1-209ENST00000568569 IWS1Q96ST2 819 aa13.83□□□□□ -0.2
GTF3C1-209ENST00000568569 C17orf80Q9BSJ5 609 aa13.83□□□□□ -0.2
GTF3C1-209ENST00000568569 EMSYQ7Z589 1322 aa13.83□□□□□ -0.2
GTF3C1-209ENST00000568569 GRXCR2A6NFK2 248 aa13.82□□□□□ -0.2
GTF3C1-209ENST00000568569 LGR5O75473 907 aa13.82□□□□□ -0.2
GTF3C1-209ENST00000568569 MBTPS1Q14703 1052 aa13.82□□□□□ -0.2
GTF3C1-209ENST00000568569 MFSD10Q14728 455 aa13.82□□□□□ -0.2
GTF3C1-209ENST00000568569 CSPP1Q1MSJ5 1256 aa13.82□□□□□ -0.2
GTF3C1-209ENST00000568569 KIAA0753Q2KHM9 967 aa13.82□□□□□ -0.2
GTF3C1-209ENST00000568569 TRIM71Q2Q1W2 868 aaKnown RBP13.82□□□□□ -0.2
GTF3C1-209ENST00000568569 ZNF618Q5T7W0 954 aa13.82□□□□□ -0.2
GTF3C1-209ENST00000568569 TRAF7Q6Q0C0 670 aa13.82□□□□□ -0.2
GTF3C1-209ENST00000568569 MCF2L2Q86YR7 1114 aa13.82□□□□□ -0.2
GTF3C1-209ENST00000568569 PPTC7Q8NI37 304 aa13.82□□□□□ -0.2
GTF3C1-209ENST00000568569 MRPL38Q96DV4 380 aaKnown RBP13.82□□□□□ -0.2
GTF3C1-209ENST00000568569 UIMC1Q96RL1 719 aa13.82□□□□□ -0.2
GTF3C1-209ENST00000568569 RMDN3Q96TC7 470 aa13.82□□□□□ -0.2
GTF3C1-209ENST00000568569 ALG1Q9BT22 464 aa13.82□□□□□ -0.2
GTF3C1-209ENST00000568569 HELLSQ9NRZ9 838 aa13.82□□□□□ -0.2
GTF3C1-209ENST00000568569 COL20A1Q9P218 1284 aa13.82□□□□□ -0.2
GTF3C1-209ENST00000568569 DDX41Q9UJV9 622 aaKnown RBP13.82□□□□□ -0.2
GTF3C1-209ENST00000568569 ABCB11O95342 1321 aa13.82□□□□□ -0.2
GTF3C1-209ENST00000568569 ZMYM6O95789 1325 aa13.82□□□□□ -0.2
GTF3C1-209ENST00000568569 HAS3O00219 553 aa13.81□□□□□ -0.2
GTF3C1-209ENST00000568569 AMHP03971 560 aa13.81□□□□□ -0.2
GTF3C1-209ENST00000568569 ZNF286BP0CG31 522 aa13.81□□□□□ -0.2
GTF3C1-209ENST00000568569 GOLGA8HP0CJ92 632 aa13.81□□□□□ -0.2
GTF3C1-209ENST00000568569 LAMC2Q13753 1193 aa13.81□□□□□ -0.2
GTF3C1-209ENST00000568569 CDC37Q16543 378 aaPredicted RBP13.81□□□□□ -0.2
GTF3C1-209ENST00000568569 TIGD5Q53EQ6 642 aa13.81□□□□□ -0.2
GTF3C1-209ENST00000568569 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.81□□□□□ -0.2
GTF3C1-209ENST00000568569 DHX37Q8IY37 1157 aaKnown RBP13.81□□□□□ -0.2
GTF3C1-209ENST00000568569 MYOCDQ8IZQ8 938 aa13.81□□□□□ -0.2
GTF3C1-209ENST00000568569 NEK9Q8TD19 979 aa13.81□□□□□ -0.2
GTF3C1-209ENST00000568569 WNT8BQ93098 351 aa13.81□□□□□ -0.2
GTF3C1-209ENST00000568569 EVI5LQ96CN4 794 aa13.81□□□□□ -0.2
GTF3C1-209ENST00000568569 SAMD11Q96NU1 681 aa13.81□□□□□ -0.2
GTF3C1-209ENST00000568569 TAAR1Q96RJ0 339 aa13.81□□□□□ -0.2
GTF3C1-209ENST00000568569 MRVI1Q9Y6F6 885 aa13.81□□□□□ -0.2
GTF3C1-209ENST00000568569 PTPRSQ13332 1948 aa13.8□□□□□ -0.2
GTF3C1-209ENST00000568569 TRIP12Q14669 1992 aaPredicted RBP13.8□□□□□ -0.2
GTF3C1-209ENST00000568569 DCXO43602 365 aa13.8□□□□□ -0.2
GTF3C1-209ENST00000568569 EIF3JO75822 258 aaKnown RBP13.8□□□□□ -0.2
GTF3C1-209ENST00000568569 HAND2P61296 217 aa13.8□□□□□ -0.2
GTF3C1-209ENST00000568569 HTRA4P83105 476 aaPredicted RBP13.8□□□□□ -0.2
GTF3C1-209ENST00000568569 MKRN4PQ13434 485 aaPredicted RBP13.8□□□□□ -0.2
GTF3C1-209ENST00000568569 ARHGEF16Q5VV41 709 aa13.8□□□□□ -0.2
GTF3C1-209ENST00000568569 MFSD6Q6ZSS7 791 aa13.8□□□□□ -0.2
GTF3C1-209ENST00000568569 DBF4BQ8NFT6 615 aa13.8□□□□□ -0.2
GTF3C1-209ENST00000568569 SP7Q8TDD2 431 aaPredicted RBP13.8□□□□□ -0.2
GTF3C1-209ENST00000568569 TBC1D5Q92609 795 aa13.8□□□□□ -0.2
GTF3C1-209ENST00000568569 UBA5Q9GZZ9 404 aa13.8□□□□□ -0.2
GTF3C1-209ENST00000568569 CPVLQ9H3G5 476 aa13.8□□□□□ -0.2
GTF3C1-209ENST00000568569 FAM50BQ9Y247 325 aa13.8□□□□□ -0.2
GTF3C1-209ENST00000568569 H3BQ06 376 aaPredicted RBP13.79□□□□□ -0.2
GTF3C1-209ENST00000568569 HSPD1P10809 573 aaKnown RBP13.79□□□□□ -0.2
GTF3C1-209ENST00000568569 HOXD8P13378 290 aaPredicted RBP13.79□□□□□ -0.2
GTF3C1-209ENST00000568569 EIF2AK2P19525 551 aaKnown RBP13.79□□□□□ -0.2
GTF3C1-209ENST00000568569 MRE11P49959 708 aa13.79□□□□□ -0.2
GTF3C1-209ENST00000568569 ZNF200P98182 395 aaPredicted RBP13.79□□□□□ -0.2
GTF3C1-209ENST00000568569 MCMDC2Q4G0Z9 681 aa13.79□□□□□ -0.2
GTF3C1-209ENST00000568569 EPC2Q52LR7 807 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms