RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 RAG1P15918 1043 aa29.07■■■□□ 2.24
FANCA-228ENST00000567943 CPT1AP50416 773 aa29.07■■■□□ 2.24
FANCA-228ENST00000567943 PGM5Q15124 567 aa29.07■■■□□ 2.24
FANCA-228ENST00000567943 SHHQ15465 462 aa29.07■■■□□ 2.24
FANCA-228ENST00000567943 KLF18A0A0U1RQI7 1052 aa29.06■■■□□ 2.24
FANCA-228ENST00000567943 ZBTB43O43298 467 aa29.06■■■□□ 2.24
FANCA-228ENST00000567943 PSMA5P28066 241 aa29.06■■■□□ 2.24
FANCA-228ENST00000567943 ARHGAP1Q07960 439 aa29.06■■■□□ 2.24
FANCA-228ENST00000567943 Q6ZUG5 572 aa29.06■■■□□ 2.24
FANCA-228ENST00000567943 TMTC3Q6ZXV5 915 aa29.06■■■□□ 2.24
FANCA-228ENST00000567943 VSIG10LQ86VR7 867 aa29.06■■■□□ 2.24
FANCA-228ENST00000567943 FCHSD1Q86WN1 690 aa29.06■■■□□ 2.24
FANCA-228ENST00000567943 CCDC82Q8N4S0 544 aa29.06■■■□□ 2.24
FANCA-228ENST00000567943 POLR3EQ9NVU0 708 aa29.06■■■□□ 2.24
FANCA-228ENST00000567943 SEC63Q9UGP8 760 aaKnown RBP29.06■■■□□ 2.24
FANCA-228ENST00000567943 DDX41Q9UJV9 622 aaKnown RBP29.06■■■□□ 2.24
FANCA-228ENST00000567943 hCG_1642624A0A1W2PR95 340 aa29.05■■■□□ 2.24
FANCA-228ENST00000567943 TIMP1P01033 207 aa29.05■■■□□ 2.24
FANCA-228ENST00000567943 MYL3P08590 195 aa29.05■■■□□ 2.24
FANCA-228ENST00000567943 CASTP20810 708 aaKnown RBP29.05■■■□□ 2.24
FANCA-228ENST00000567943 RPS6KB1P23443 525 aa29.05■■■□□ 2.24
FANCA-228ENST00000567943 NAP1L2Q9ULW6 460 aaPredicted RBP29.05■■■□□ 2.24
FANCA-228ENST00000567943 COL6A3P12111 3177 aa29.04■■■□□ 2.24
FANCA-228ENST00000567943 FRMPD4Q14CM0 1322 aa29.04■■■□□ 2.24
FANCA-228ENST00000567943 MYCLP12524 364 aaPredicted RBP29.04■■■□□ 2.24
FANCA-228ENST00000567943 RTN1Q16799 776 aa29.04■■■□□ 2.24
FANCA-228ENST00000567943 AFG1LQ8WV93 481 aa29.04■■■□□ 2.24
FANCA-228ENST00000567943 ZFP91Q96JP5 570 aaPredicted RBP29.04■■■□□ 2.24
FANCA-228ENST00000567943 TRPV6Q9H1D0 765 aa29.04■■■□□ 2.24
FANCA-228ENST00000567943 RBM28Q9NW13 759 aaKnown RBP29.04■■■□□ 2.24
FANCA-228ENST00000567943 B4GALT4O60513 344 aa29.03■■■□□ 2.24
FANCA-228ENST00000567943 PPP1R13LQ8WUF5 828 aa29.03■■■□□ 2.24
FANCA-228ENST00000567943 BRF1Q92994 677 aa29.03■■■□□ 2.24
FANCA-228ENST00000567943 MTG1Q9BT17 334 aaPredicted RBP29.03■■■□□ 2.24
FANCA-228ENST00000567943 GOLGA8AA7E2F4 631 aa29.02■■■□□ 2.24
FANCA-228ENST00000567943 GOLGA8BA8MQT2 603 aa29.02■■■□□ 2.24
FANCA-228ENST00000567943 MEIS2O14770 477 aa29.02■■■□□ 2.24
FANCA-228ENST00000567943 GH1P01241 217 aa29.02■■■□□ 2.24
FANCA-228ENST00000567943 APOBRQ0VD83 1088 aa29.02■■■□□ 2.24
FANCA-228ENST00000567943 FUT2Q10981 343 aa29.02■■■□□ 2.24
FANCA-228ENST00000567943 USP17L6PQ6QN14 398 aa29.02■■■□□ 2.24
FANCA-228ENST00000567943 FAM217BQ9NTX9 383 aaPredicted RBP29.02■■■□□ 2.24
FANCA-228ENST00000567943 MFSD5Q6N075 450 aa29.01■■■□□ 2.23
FANCA-228ENST00000567943 GPKOWQ92917 476 aaPredicted RBP eCLIP29.01■■■□□ 2.23
FANCA-228ENST00000567943 SEZ6LQ9BYH1 1024 aa29.01■■■□□ 2.23
FANCA-228ENST00000567943 ALDH8A1Q9H2A2 487 aaPredicted RBP29.01■■■□□ 2.23
FANCA-228ENST00000567943 MRVI1Q9Y6F6 885 aa29.01■■■□□ 2.23
FANCA-228ENST00000567943 CNTNAP5Q8WYK1 1306 aa29■■■□□ 2.23
FANCA-228ENST00000567943 PIK3CDO00329 1044 aa29■■■□□ 2.23
FANCA-228ENST00000567943 TLR3O15455 904 aaKnown RBP29■■■□□ 2.23
FANCA-228ENST00000567943 MMP3P08254 477 aa29■■■□□ 2.23
FANCA-228ENST00000567943 MRPS9P82933 396 aaKnown RBP29■■■□□ 2.23
FANCA-228ENST00000567943 SP2Q02086 613 aa29■■■□□ 2.23
FANCA-228ENST00000567943 FPGSQ05932 587 aa29■■■□□ 2.23
FANCA-228ENST00000567943 EMID1Q96A84 441 aaPredicted RBP29■■■□□ 2.23
FANCA-228ENST00000567943 PPP1R12CQ9BZL4 782 aa29■■■□□ 2.23
FANCA-228ENST00000567943 UMODL1Q5DID0 1318 aa28.99■■■□□ 2.23
FANCA-228ENST00000567943 KPNA6O60684 536 aa28.99■■■□□ 2.23
FANCA-228ENST00000567943 CCND2P30279 289 aa28.99■■■□□ 2.23
FANCA-228ENST00000567943 RCAN1P53805 252 aa28.99■■■□□ 2.23
FANCA-228ENST00000567943 NBPF20Q3BBV1 942 aa28.99■■■□□ 2.23
FANCA-228ENST00000567943 BRDTQ58F21 947 aaPredicted RBP28.99■■■□□ 2.23
FANCA-228ENST00000567943 C16orf59Q7L2K0 433 aa28.99■■■□□ 2.23
FANCA-228ENST00000567943 ZSWIM6Q9HCJ5 1215 aa28.99■■■□□ 2.23
FANCA-228ENST00000567943 TRMT13Q9NUP7 481 aaKnown RBP28.99■■■□□ 2.23
FANCA-228ENST00000567943 DOCK5Q9H7D0 1870 aa28.99■■■□□ 2.23
FANCA-228ENST00000567943 CDH23Q9H251 3354 aa28.98■■■□□ 2.23
FANCA-228ENST00000567943 CDC27P30260 824 aa28.98■■■□□ 2.23
FANCA-228ENST00000567943 CYP2C18P33260 490 aa28.98■■■□□ 2.23
FANCA-228ENST00000567943 GPR153Q6NV75 609 aa28.98■■■□□ 2.23
FANCA-228ENST00000567943 RUFY3Q7L099 469 aa28.98■■■□□ 2.23
FANCA-228ENST00000567943 FBXL16Q8N461 479 aa28.98■■■□□ 2.23
FANCA-228ENST00000567943 KAT2BQ92831 832 aa28.98■■■□□ 2.23
FANCA-228ENST00000567943 AGXT2Q9BYV1 514 aa28.98■■■□□ 2.23
FANCA-228ENST00000567943 METAP2P50579 478 aaKnown RBP eCLIP28.97■■■□□ 2.23
FANCA-228ENST00000567943 NOC4LQ9BVI4 516 aaKnown RBP28.97■■■□□ 2.23
FANCA-228ENST00000567943 BCAS3Q9H6U6 928 aa28.97■■■□□ 2.23
FANCA-228ENST00000567943 CYP46A1Q9Y6A2 500 aa28.97■■■□□ 2.23
FANCA-228ENST00000567943 CSF2RAP15509 400 aa28.96■■■□□ 2.23
FANCA-228ENST00000567943 MYSM1Q5VVJ2 828 aa28.96■■■□□ 2.23
FANCA-228ENST00000567943 TYW1BQ6NUM6 668 aa28.96■■■□□ 2.23
FANCA-228ENST00000567943 SMARCC2Q8TAQ2 1214 aa28.96■■■□□ 2.23
FANCA-228ENST00000567943 TM6SF1Q9BZW5 370 aa28.96■■■□□ 2.23
FANCA-228ENST00000567943 HIPK3Q9H422 1215 aa28.96■■■□□ 2.23
FANCA-228ENST00000567943 UBA1P22314 1058 aaKnown RBP28.95■■■□□ 2.22
FANCA-228ENST00000567943 LAMC2Q13753 1193 aa28.95■■■□□ 2.22
FANCA-228ENST00000567943 NFRKBQ6P4R8 1299 aa28.95■■■□□ 2.22
FANCA-228ENST00000567943 Q7L0L9 218 aa28.95■■■□□ 2.22
FANCA-228ENST00000567943 HEATR3Q7Z4Q2 680 aa28.95■■■□□ 2.22
FANCA-228ENST00000567943 INPP4AQ96PE3 977 aaPredicted RBP28.95■■■□□ 2.22
FANCA-228ENST00000567943 UPF3BQ9BZI7 483 aaKnown RBP28.95■■■□□ 2.22
FANCA-228ENST00000567943 WNT8AQ9H1J5 351 aa28.95■■■□□ 2.22
FANCA-228ENST00000567943 PSTPIP2Q9H939 334 aa28.95■■■□□ 2.22
FANCA-228ENST00000567943 SORBS3O60504 671 aa28.94■■■□□ 2.22
FANCA-228ENST00000567943 HOXD8P13378 290 aaPredicted RBP28.94■■■□□ 2.22
FANCA-228ENST00000567943 ADD1P35611 737 aaKnown RBP28.94■■■□□ 2.22
FANCA-228ENST00000567943 SEMA3FQ13275 785 aa28.94■■■□□ 2.22
FANCA-228ENST00000567943 CELF3Q5SZQ8 465 aaKnown RBP28.94■■■□□ 2.22
FANCA-228ENST00000567943 WWC2Q6AWC2 1192 aa28.94■■■□□ 2.22
FANCA-228ENST00000567943 KCNV1Q6PIU1 500 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms