RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 MDM2Q00987 491 aaPredicted RBP16.51■□□□□ 0.23
COMMD4-221ENST00000567935 SEMA3FQ13275 785 aa16.51■□□□□ 0.23
COMMD4-221ENST00000567935 JAKMIP3Q5VZ66 844 aa16.51■□□□□ 0.23
COMMD4-221ENST00000567935 MOXD1Q6UVY6 613 aa16.51■□□□□ 0.23
COMMD4-221ENST00000567935 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.51■□□□□ 0.23
COMMD4-221ENST00000567935 DIS3LQ8TF46 1054 aaKnown RBP16.51■□□□□ 0.23
COMMD4-221ENST00000567935 CCSER1Q9C0I3 900 aa16.51■□□□□ 0.23
COMMD4-221ENST00000567935 CUEDC2Q9H467 287 aa16.51■□□□□ 0.23
COMMD4-221ENST00000567935 ZCCHC17Q9NP64 241 aaKnown RBP16.51■□□□□ 0.23
COMMD4-221ENST00000567935 FEM1BQ9UK73 627 aa16.51■□□□□ 0.23
COMMD4-221ENST00000567935 PNMA2Q9UL42 364 aa16.51■□□□□ 0.23
COMMD4-221ENST00000567935 SPDYE5A6NIY4 337 aa16.5■□□□□ 0.23
COMMD4-221ENST00000567935 SMTNL1A8MU46 457 aa16.5■□□□□ 0.23
COMMD4-221ENST00000567935 CCNT1O60563 726 aaKnown RBP16.5■□□□□ 0.23
COMMD4-221ENST00000567935 TFRCP02786 760 aaKnown RBP16.5■□□□□ 0.23
COMMD4-221ENST00000567935 IQCB1Q15051 598 aa16.5■□□□□ 0.23
COMMD4-221ENST00000567935 LETM2Q2VYF4 491 aa16.5■□□□□ 0.23
COMMD4-221ENST00000567935 SPECC1Q5M775 1068 aa16.5■□□□□ 0.23
COMMD4-221ENST00000567935 MIGA2Q7L4E1 593 aa16.5■□□□□ 0.23
COMMD4-221ENST00000567935 SMARCE1Q969G3 411 aa16.5■□□□□ 0.23
COMMD4-221ENST00000567935 DEFB118Q96PH6 123 aa16.5■□□□□ 0.23
COMMD4-221ENST00000567935 ZNF341Q9BYN7 854 aa16.5■□□□□ 0.23
COMMD4-221ENST00000567935 RAB34Q9BZG1 259 aa16.5■□□□□ 0.23
COMMD4-221ENST00000567935 MAGEF1Q9HAY2 307 aa16.5■□□□□ 0.23
COMMD4-221ENST00000567935 CCDC39Q9UFE4 941 aa16.5■□□□□ 0.23
COMMD4-221ENST00000567935 SERTAD1Q9UHV2 236 aa16.5■□□□□ 0.23
COMMD4-221ENST00000567935 PRR12Q9ULL5 1215 aa16.5■□□□□ 0.23
COMMD4-221ENST00000567935 ADGRA2Q96PE1 1338 aa16.49■□□□□ 0.23
COMMD4-221ENST00000567935 SLC26A4O43511 780 aa16.49■□□□□ 0.23
COMMD4-221ENST00000567935 ADCY5O95622 1261 aa16.49■□□□□ 0.23
COMMD4-221ENST00000567935 MYL1P05976 194 aa16.49■□□□□ 0.23
COMMD4-221ENST00000567935 USP11P51784 963 aa16.49■□□□□ 0.23
COMMD4-221ENST00000567935 SARM1Q6SZW1 724 aa16.49■□□□□ 0.23
COMMD4-221ENST00000567935 C11orf57Q6ZUT1 292 aaPredicted RBP16.49■□□□□ 0.23
COMMD4-221ENST00000567935 SH3RF1Q7Z6J0 888 aa16.49■□□□□ 0.23
COMMD4-221ENST00000567935 LUZP1Q86V48 1076 aa16.49■□□□□ 0.23
COMMD4-221ENST00000567935 SLAIN1Q8ND83 568 aa16.49■□□□□ 0.23
COMMD4-221ENST00000567935 SPATA20Q8TB22 786 aa16.49■□□□□ 0.23
COMMD4-221ENST00000567935 ACER1Q8TDN7 264 aa16.49■□□□□ 0.23
COMMD4-221ENST00000567935 EPSTI1Q96J88 318 aa16.49■□□□□ 0.23
COMMD4-221ENST00000567935 FAM161BQ96MY7 647 aa16.49■□□□□ 0.23
COMMD4-221ENST00000567935 KIAA1683Q9H0B3 1180 aa16.49■□□□□ 0.23
COMMD4-221ENST00000567935 GABRQQ9UN88 632 aa16.49■□□□□ 0.23
COMMD4-221ENST00000567935 CSADQ9Y600 493 aa16.49■□□□□ 0.23
COMMD4-221ENST00000567935 IKBKBO14920 756 aa16.48■□□□□ 0.23
COMMD4-221ENST00000567935 WDR46O15213 610 aaKnown RBP16.48■□□□□ 0.23
COMMD4-221ENST00000567935 UBA7P41226 1012 aa16.48■□□□□ 0.23
COMMD4-221ENST00000567935 SARSP49591 514 aaKnown RBP16.48■□□□□ 0.23
COMMD4-221ENST00000567935 PNOCQ13519 176 aa16.48■□□□□ 0.23
COMMD4-221ENST00000567935 TMEM266Q2M3C6 531 aa16.48■□□□□ 0.23
COMMD4-221ENST00000567935 USP49Q70CQ1 688 aa16.48■□□□□ 0.23
COMMD4-221ENST00000567935 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.48■□□□□ 0.23
COMMD4-221ENST00000567935 MLKLQ8NB16 471 aa16.48■□□□□ 0.23
COMMD4-221ENST00000567935 DHX58Q96C10 678 aa16.48■□□□□ 0.23
COMMD4-221ENST00000567935 GSDMAQ96QA5 445 aa16.48■□□□□ 0.23
COMMD4-221ENST00000567935 NUP88Q99567 741 aaPredicted RBP16.48■□□□□ 0.23
COMMD4-221ENST00000567935 FEZ1Q99689 392 aa16.48■□□□□ 0.23
COMMD4-221ENST00000567935 TMEM60Q9H2L4 133 aa16.48■□□□□ 0.23
COMMD4-221ENST00000567935 RANBP17Q9H2T7 1088 aaKnown RBP16.48■□□□□ 0.23
COMMD4-221ENST00000567935 PCDHA5Q9Y5H7 936 aa16.48■□□□□ 0.23
COMMD4-221ENST00000567935 SNCAIPQ9Y6H5 919 aa16.48■□□□□ 0.23
COMMD4-221ENST00000567935 PRUNE2Q8WUY3 3088 aa16.48■□□□□ 0.23
COMMD4-221ENST00000567935 GOLGA6L6A8MZA4 724 aa16.47■□□□□ 0.23
COMMD4-221ENST00000567935 POTEB2H3BUK9 544 aa16.47■□□□□ 0.23
COMMD4-221ENST00000567935 PIK3CDO00329 1044 aa16.47■□□□□ 0.23
COMMD4-221ENST00000567935 IRF6O14896 467 aa16.47■□□□□ 0.23
COMMD4-221ENST00000567935 TPM3P06753 285 aa16.47■□□□□ 0.23
COMMD4-221ENST00000567935 FXR2P51116 673 aaKnown RBP eCLIP16.47■□□□□ 0.23
COMMD4-221ENST00000567935 USP14P54578 494 aa16.47■□□□□ 0.23
COMMD4-221ENST00000567935 SNAPC2Q13487 334 aa16.47■□□□□ 0.23
COMMD4-221ENST00000567935 E2F4Q16254 413 aa16.47■□□□□ 0.23
COMMD4-221ENST00000567935 IL17AQ16552 155 aa16.47■□□□□ 0.23
COMMD4-221ENST00000567935 CALCRLQ16602 461 aa16.47■□□□□ 0.23
COMMD4-221ENST00000567935 DPCR1Q3MIW9 517 aa16.47■□□□□ 0.23
COMMD4-221ENST00000567935 FAM83BQ5T0W9 1011 aa16.47■□□□□ 0.23
COMMD4-221ENST00000567935 PDILTQ8N807 584 aa16.47■□□□□ 0.23
COMMD4-221ENST00000567935 MTMR9Q96QG7 549 aa16.47■□□□□ 0.23
COMMD4-221ENST00000567935 UBE2OQ9C0C9 1292 aaKnown RBP16.47■□□□□ 0.23
COMMD4-221ENST00000567935 AS3MTQ9HBK9 375 aa16.47■□□□□ 0.23
COMMD4-221ENST00000567935 TMEM260Q9NX78 707 aa16.47■□□□□ 0.23
COMMD4-221ENST00000567935 ZNF112Q9UJU3 913 aa16.47■□□□□ 0.23
COMMD4-221ENST00000567935 DOCK1Q14185 1865 aa16.47■□□□□ 0.23
COMMD4-221ENST00000567935 MUC3AQ02505 3323 aa16.47■□□□□ 0.23
COMMD4-221ENST00000567935 CYP3A7-CYP3A51PA0A087WV96 503 aa16.46■□□□□ 0.23
COMMD4-221ENST00000567935 INHAP05111 366 aa16.46■□□□□ 0.23
COMMD4-221ENST00000567935 FDX1P10109 184 aa16.46■□□□□ 0.23
COMMD4-221ENST00000567935 ELNP15502 786 aa16.46■□□□□ 0.23
COMMD4-221ENST00000567935 CYP3A7P24462 503 aa16.46■□□□□ 0.23
COMMD4-221ENST00000567935 PDIA5Q14554 519 aa16.46■□□□□ 0.23
COMMD4-221ENST00000567935 NECAB2Q7Z6G3 386 aa16.46■□□□□ 0.23
COMMD4-221ENST00000567935 PAGE5Q96GU1 130 aa16.46■□□□□ 0.23
COMMD4-221ENST00000567935 WDR18Q9BV38 432 aa16.46■□□□□ 0.23
COMMD4-221ENST00000567935 ANO3Q9BYT9 981 aa16.46■□□□□ 0.23
COMMD4-221ENST00000567935 GTPBP4Q9BZE4 634 aaKnown RBP16.46■□□□□ 0.23
COMMD4-221ENST00000567935 CRISPLD2Q9H0B8 497 aa16.46■□□□□ 0.23
COMMD4-221ENST00000567935 DISC1Q9NRI5 854 aa16.46■□□□□ 0.23
COMMD4-221ENST00000567935 ABCB11O95342 1321 aa16.45■□□□□ 0.22
COMMD4-221ENST00000567935 A0A087X0B3 334 aa16.45■□□□□ 0.22
COMMD4-221ENST00000567935 GTPBP6O43824 516 aaPredicted RBP16.45■□□□□ 0.22
COMMD4-221ENST00000567935 ADCY3O60266 1144 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms