RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 CD2APQ9Y5K6 639 aa6.68□□□□□ -1.34
CAPN3-217ENST00000567817 WNK3Q9BYP7 1800 aa6.68□□□□□ -1.34
CAPN3-217ENST00000567817 TNS2Q63HR2 1409 aa6.67□□□□□ -1.34
CAPN3-217ENST00000567817 NSD3Q9BZ95 1437 aa6.67□□□□□ -1.34
CAPN3-217ENST00000567817 ABCC6O95255 1503 aa6.67□□□□□ -1.34
CAPN3-217ENST00000567817 SHISA3A0PJX4 238 aa6.67□□□□□ -1.34
CAPN3-217ENST00000567817 GCP02774 474 aa6.67□□□□□ -1.34
CAPN3-217ENST00000567817 YBX3P16989 372 aaKnown RBP eCLIP6.67□□□□□ -1.34
CAPN3-217ENST00000567817 TXKP42681 527 aa6.67□□□□□ -1.34
CAPN3-217ENST00000567817 AFMP43652 599 aa6.67□□□□□ -1.34
CAPN3-217ENST00000567817 SOX9P48436 509 aa6.67□□□□□ -1.34
CAPN3-217ENST00000567817 EGR3Q06889 387 aa6.67□□□□□ -1.34
CAPN3-217ENST00000567817 NMIQ13287 307 aaPredicted RBP6.67□□□□□ -1.34
CAPN3-217ENST00000567817 C9orf131Q5VYM1 1079 aa6.67□□□□□ -1.34
CAPN3-217ENST00000567817 TMEM192Q8IY95 271 aa6.67□□□□□ -1.34
CAPN3-217ENST00000567817 MARCH10Q8NA82 808 aaPredicted RBP6.67□□□□□ -1.34
CAPN3-217ENST00000567817 RUNDC1Q96C34 613 aa6.67□□□□□ -1.34
CAPN3-217ENST00000567817 SLC9A7Q96T83 725 aa6.67□□□□□ -1.34
CAPN3-217ENST00000567817 HDAC8Q9BY41 377 aa6.67□□□□□ -1.34
CAPN3-217ENST00000567817 GINM1Q9NU53 330 aa6.67□□□□□ -1.34
CAPN3-217ENST00000567817 PPT2Q9UMR5 302 aa6.67□□□□□ -1.34
CAPN3-217ENST00000567817 WDR17Q8IZU2 1322 aa6.67□□□□□ -1.34
CAPN3-217ENST00000567817 KDM2BQ8NHM5 1336 aa6.67□□□□□ -1.34
CAPN3-217ENST00000567817 EXOC5O00471 708 aa6.66□□□□□ -1.34
CAPN3-217ENST00000567817 APAF1O14727 1248 aa6.66□□□□□ -1.34
CAPN3-217ENST00000567817 ACRP10323 421 aa6.66□□□□□ -1.34
CAPN3-217ENST00000567817 SAFB2Q14151 953 aaKnown RBP eCLIP6.66□□□□□ -1.34
CAPN3-217ENST00000567817 FBXW10Q5XX13 1052 aa6.66□□□□□ -1.34
CAPN3-217ENST00000567817 TOM1L2Q6ZVM7 507 aa6.66□□□□□ -1.34
CAPN3-217ENST00000567817 ZSWIM9Q86XI8 627 aa6.66□□□□□ -1.34
CAPN3-217ENST00000567817 DHRS1Q96LJ7 313 aa6.66□□□□□ -1.34
CAPN3-217ENST00000567817 CRBNQ96SW2 442 aa6.66□□□□□ -1.34
CAPN3-217ENST00000567817 MKRN2Q9H000 416 aaKnown RBP6.66□□□□□ -1.34
CAPN3-217ENST00000567817 TERF2IPQ9NYB0 399 aa6.66□□□□□ -1.34
CAPN3-217ENST00000567817 PCDHA11Q9Y5I1 949 aa6.66□□□□□ -1.34
CAPN3-217ENST00000567817 ARHGEF28Q8N1W1 1705 aaKnown RBP6.66□□□□□ -1.34
CAPN3-217ENST00000567817 WDR90Q96KV7 1748 aa6.65□□□□□ -1.34
CAPN3-217ENST00000567817 DNAJC25-GNG10A0A024R161 153 aa6.65□□□□□ -1.34
CAPN3-217ENST00000567817 GUCY2CP25092 1073 aa6.65□□□□□ -1.34
CAPN3-217ENST00000567817 FSTL1Q12841 308 aa6.65□□□□□ -1.34
CAPN3-217ENST00000567817 RALGPS1Q5JS13 557 aa6.65□□□□□ -1.34
CAPN3-217ENST00000567817 TTC6Q86TZ1 520 aa6.65□□□□□ -1.34
CAPN3-217ENST00000567817 LSRQ86X29 649 aaPredicted RBP6.65□□□□□ -1.34
CAPN3-217ENST00000567817 DAGLBQ8NCG7 672 aa6.65□□□□□ -1.34
CAPN3-217ENST00000567817 NLGN2Q8NFZ4 835 aa6.65□□□□□ -1.34
CAPN3-217ENST00000567817 SMARCC1Q92922 1105 aaPredicted RBP6.65□□□□□ -1.34
CAPN3-217ENST00000567817 ZNF512BQ96KM6 892 aaPredicted RBP6.65□□□□□ -1.34
CAPN3-217ENST00000567817 MYH16Q9H6N6 1097 aa6.65□□□□□ -1.34
CAPN3-217ENST00000567817 CCSER2Q9H7U1 834 aa6.65□□□□□ -1.34
CAPN3-217ENST00000567817 SUCOQ9UBS9 1254 aaKnown RBP6.65□□□□□ -1.34
CAPN3-217ENST00000567817 EFR3BQ9Y2G0 817 aa6.65□□□□□ -1.34
CAPN3-217ENST00000567817 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.65□□□□□ -1.34
CAPN3-217ENST00000567817 MAPK8IP3Q9UPT6 1336 aa6.65□□□□□ -1.35
CAPN3-217ENST00000567817 PPM1GO15355 546 aaPredicted RBP6.64□□□□□ -1.35
CAPN3-217ENST00000567817 SIGLEC6O43699 453 aa6.64□□□□□ -1.35
CAPN3-217ENST00000567817 RAC2P15153 192 aa6.64□□□□□ -1.35
CAPN3-217ENST00000567817 SNW1Q13573 536 aaKnown RBP6.64□□□□□ -1.35
CAPN3-217ENST00000567817 KCNMB1Q16558 191 aa6.64□□□□□ -1.35
CAPN3-217ENST00000567817 ZNF827Q17R98 1081 aa6.64□□□□□ -1.35
CAPN3-217ENST00000567817 PTF1AQ7RTS3 328 aa6.64□□□□□ -1.35
CAPN3-217ENST00000567817 TMC3Q7Z5M5 1100 aa6.64□□□□□ -1.35
CAPN3-217ENST00000567817 ZNF655Q8N720 491 aaPredicted RBP6.64□□□□□ -1.35
CAPN3-217ENST00000567817 OR6P1Q8NGX9 317 aa6.64□□□□□ -1.35
CAPN3-217ENST00000567817 DHX38Q92620 1227 aaKnown RBP6.64□□□□□ -1.35
CAPN3-217ENST00000567817 SYTL4Q96C24 671 aaPredicted RBP6.64□□□□□ -1.35
CAPN3-217ENST00000567817 KIRREL1Q96J84 757 aa6.64□□□□□ -1.35
CAPN3-217ENST00000567817 PRR13Q9NZ81 148 aa6.64□□□□□ -1.35
CAPN3-217ENST00000567817 PCDHB12Q9Y5F1 795 aa6.64□□□□□ -1.35
CAPN3-217ENST00000567817 PNPLA7Q6ZV29 1317 aa6.64□□□□□ -1.35
CAPN3-217ENST00000567817 USP6P35125 1406 aa6.64□□□□□ -1.35
CAPN3-217ENST00000567817 SLIT3O75094 1523 aa6.64□□□□□ -1.35
CAPN3-217ENST00000567817 CICQ96RK0 1608 aaPredicted RBP6.64□□□□□ -1.35
CAPN3-217ENST00000567817 QRICH2Q9H0J4 1663 aa6.64□□□□□ -1.35
CAPN3-217ENST00000567817 ACEP12821 1306 aa6.63□□□□□ -1.35
CAPN3-217ENST00000567817 TCF3P15923 654 aa6.63□□□□□ -1.35
CAPN3-217ENST00000567817 CANXP27824 592 aaKnown RBP6.63□□□□□ -1.35
CAPN3-217ENST00000567817 PMS1P54277 932 aaKnown RBP6.63□□□□□ -1.35
CAPN3-217ENST00000567817 EIF6P56537 245 aaKnown RBP6.63□□□□□ -1.35
CAPN3-217ENST00000567817 TEKQ02763 1124 aa6.63□□□□□ -1.35
CAPN3-217ENST00000567817 IL16Q14005 1332 aa6.63□□□□□ -1.35
CAPN3-217ENST00000567817 CCDC81Q6ZN84 652 aa6.63□□□□□ -1.35
CAPN3-217ENST00000567817 RNF111Q6ZNA4 994 aa6.63□□□□□ -1.35
CAPN3-217ENST00000567817 C10orf71Q711Q0 1435 aa6.63□□□□□ -1.35
CAPN3-217ENST00000567817 HDGFL2Q7Z4V5 671 aaPredicted RBP6.63□□□□□ -1.35
CAPN3-217ENST00000567817 ZNF526Q8TF50 670 aaPredicted RBP6.63□□□□□ -1.35
CAPN3-217ENST00000567817 ZNF428Q96B54 188 aa6.63□□□□□ -1.35
CAPN3-217ENST00000567817 SRRTQ9BXP5 876 aaKnown RBP6.63□□□□□ -1.35
CAPN3-217ENST00000567817 PRDM14Q9GZV8 571 aa6.63□□□□□ -1.35
CAPN3-217ENST00000567817 TFCP2L1Q9NZI6 479 aa6.63□□□□□ -1.35
CAPN3-217ENST00000567817 CPSF1Q10570 1443 aaKnown RBP6.62□□□□□ -1.35
CAPN3-217ENST00000567817 PPIP5K1Q6PFW1 1433 aa6.62□□□□□ -1.35
CAPN3-217ENST00000567817 FAM86C2PA6NEL3 165 aa6.62□□□□□ -1.35
CAPN3-217ENST00000567817 PRAMEF1O95521 474 aa6.62□□□□□ -1.35
CAPN3-217ENST00000567817 HPXP02790 462 aa6.62□□□□□ -1.35
CAPN3-217ENST00000567817 GLI1P08151 1106 aa6.62□□□□□ -1.35
CAPN3-217ENST00000567817 ZGLP1P0C6A0 271 aa6.62□□□□□ -1.35
CAPN3-217ENST00000567817 AUHQ13825 339 aaKnown RBP6.62□□□□□ -1.35
CAPN3-217ENST00000567817 OGFOD2Q6N063 350 aa6.62□□□□□ -1.35
CAPN3-217ENST00000567817 CCDC146Q8IYE0 955 aa6.62□□□□□ -1.35
CAPN3-217ENST00000567817 KCNH5Q8NCM2 988 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms