RNA–Protein interactions for RNA: ENST00000567138.2

SPG7-216, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 1,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-216ENST00000567138 CCDC155Q8N6L0 562 aa13.24□□□□□ -0.29
SPG7-216ENST00000567138 DHX38Q92620 1227 aaKnown RBP13.24□□□□□ -0.29
SPG7-216ENST00000567138 CTAGE1Q96RT6 745 aa13.24□□□□□ -0.29
SPG7-216ENST00000567138 TOMM22Q9NS69 142 aa13.24□□□□□ -0.29
SPG7-216ENST00000567138 LAMA4Q16363 1823 aa13.24□□□□□ -0.29
SPG7-216ENST00000567138 NOVP48745 357 aa13.23□□□□□ -0.29
SPG7-216ENST00000567138 GPNMBQ14956 572 aa13.23□□□□□ -0.29
SPG7-216ENST00000567138 RRP12Q5JTH9 1297 aaKnown RBP13.23□□□□□ -0.29
SPG7-216ENST00000567138 VPS53Q5VIR6 699 aa13.23□□□□□ -0.29
SPG7-216ENST00000567138 LRRC8DQ7L1W4 858 aa13.23□□□□□ -0.29
SPG7-216ENST00000567138 CAGE1Q8TC20 777 aa13.23□□□□□ -0.29
SPG7-216ENST00000567138 PI4K2BQ8TCG2 481 aa13.23□□□□□ -0.29
SPG7-216ENST00000567138 OTUD7AQ8TE49 926 aaPredicted RBP13.23□□□□□ -0.29
SPG7-216ENST00000567138 AFAP1L1Q8TED9 768 aa13.23□□□□□ -0.29
SPG7-216ENST00000567138 TMEM47Q9BQJ4 181 aa13.23□□□□□ -0.29
SPG7-216ENST00000567138 UBE2ZQ9H832 354 aaPredicted RBP13.23□□□□□ -0.29
SPG7-216ENST00000567138 ZBTB47Q9UFB7 747 aaPredicted RBP13.23□□□□□ -0.29
SPG7-216ENST00000567138 ORC4O43929 436 aa13.22□□□□□ -0.29
SPG7-216ENST00000567138 MMP3P08254 477 aa13.22□□□□□ -0.29
SPG7-216ENST00000567138 TOP1P11387 765 aaKnown RBP13.22□□□□□ -0.29
SPG7-216ENST00000567138 SELPP16109 830 aa13.22□□□□□ -0.29
SPG7-216ENST00000567138 NUCB1Q02818 461 aa13.22□□□□□ -0.29
SPG7-216ENST00000567138 USH1GQ495M9 461 aa13.22□□□□□ -0.29
SPG7-216ENST00000567138 FAM117BQ6P1L5 589 aa13.22□□□□□ -0.29
SPG7-216ENST00000567138 CNKSR3Q6P9H4 555 aa13.22□□□□□ -0.29
SPG7-216ENST00000567138 AFG1LQ8WV93 481 aa13.22□□□□□ -0.29
SPG7-216ENST00000567138 MPHOSPH6Q99547 160 aaKnown RBP13.22□□□□□ -0.29
SPG7-216ENST00000567138 RALGAPA2Q2PPJ7 1873 aa13.22□□□□□ -0.29
SPG7-216ENST00000567138 DOCK5Q9H7D0 1870 aa13.22□□□□□ -0.29
SPG7-216ENST00000567138 LINC01553A4QN01 128 aa13.21□□□□□ -0.29
SPG7-216ENST00000567138 PI4K2BG5E9Z4 385 aa13.21□□□□□ -0.29
SPG7-216ENST00000567138 NBNO60934 754 aa13.21□□□□□ -0.29
SPG7-216ENST00000567138 PDHBP11177 359 aa13.21□□□□□ -0.29
SPG7-216ENST00000567138 LY6KQ17RY6 165 aa13.21□□□□□ -0.29
SPG7-216ENST00000567138 CENPQQ7L2Z9 268 aaPredicted RBP13.21□□□□□ -0.29
SPG7-216ENST00000567138 CHST3Q7LGC8 479 aa13.21□□□□□ -0.29
SPG7-216ENST00000567138 CHD1LQ86WJ1 897 aa13.21□□□□□ -0.29
SPG7-216ENST00000567138 DNERQ8NFT8 737 aa13.21□□□□□ -0.29
SPG7-216ENST00000567138 KAT2BQ92831 832 aa13.21□□□□□ -0.29
SPG7-216ENST00000567138 TGS1Q96RS0 853 aaKnown RBP13.21□□□□□ -0.29
SPG7-216ENST00000567138 LNPKQ9C0E8 428 aa13.21□□□□□ -0.29
SPG7-216ENST00000567138 SUGCTQ9HAC7 445 aa13.21□□□□□ -0.29
SPG7-216ENST00000567138 LMCD1Q9NZU5 365 aa13.21□□□□□ -0.29
SPG7-216ENST00000567138 ANAPC4Q9UJX5 808 aa13.21□□□□□ -0.29
SPG7-216ENST00000567138 MYO7AQ13402 2215 aa13.21□□□□□ -0.29
SPG7-216ENST00000567138 GJB5O95377 273 aa13.2□□□□□ -0.3
SPG7-216ENST00000567138 CKBP12277 381 aa13.2□□□□□ -0.3
SPG7-216ENST00000567138 IL9P15248 144 aa13.2□□□□□ -0.3
SPG7-216ENST00000567138 KCNA5P22460 613 aa13.2□□□□□ -0.3
SPG7-216ENST00000567138 ERVK-21P61565 698 aa13.2□□□□□ -0.3
SPG7-216ENST00000567138 ARHGAP1Q07960 439 aa13.2□□□□□ -0.3
SPG7-216ENST00000567138 ZNF543Q08ER8 600 aa13.2□□□□□ -0.3
SPG7-216ENST00000567138 SEPT14Q6ZU15 432 aa13.2□□□□□ -0.3
SPG7-216ENST00000567138 ALYREFQ86V81 257 aaKnown RBP13.2□□□□□ -0.3
SPG7-216ENST00000567138 SESTD1Q86VW0 696 aa13.2□□□□□ -0.3
SPG7-216ENST00000567138 ALG1Q9BT22 464 aa13.2□□□□□ -0.3
SPG7-216ENST00000567138 WDR19Q8NEZ3 1342 aa13.2□□□□□ -0.3
SPG7-216ENST00000567138 GH1P01241 217 aa13.2□□□□□ -0.3
SPG7-216ENST00000567138 CXCL10P02778 98 aa13.2□□□□□ -0.3
SPG7-216ENST00000567138 MX1P20591 662 aa13.2□□□□□ -0.3
SPG7-216ENST00000567138 SSTR3P32745 418 aaPredicted RBP13.2□□□□□ -0.3
SPG7-216ENST00000567138 LEXMQ3ZCV2 418 aa13.2□□□□□ -0.3
SPG7-216ENST00000567138 CCDC62Q6P9F0 684 aa13.2□□□□□ -0.3
SPG7-216ENST00000567138 FAM178BQ8IXR5 827 aa13.2□□□□□ -0.3
SPG7-216ENST00000567138 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.2□□□□□ -0.3
SPG7-216ENST00000567138 RAD9AQ99638 391 aa13.2□□□□□ -0.3
SPG7-216ENST00000567138 CPVLQ9H3G5 476 aa13.2□□□□□ -0.3
SPG7-216ENST00000567138 HDAC6Q9UBN7 1215 aa13.2□□□□□ -0.3
SPG7-216ENST00000567138 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.19□□□□□ -0.3
SPG7-216ENST00000567138 B4DLN1 442 aa13.19□□□□□ -0.3
SPG7-216ENST00000567138 ZNF286BP0CG31 522 aa13.19□□□□□ -0.3
SPG7-216ENST00000567138 GOLGA8HP0CJ92 632 aa13.19□□□□□ -0.3
SPG7-216ENST00000567138 PSEN2P49810 448 aa13.19□□□□□ -0.3
SPG7-216ENST00000567138 MRPL12P52815 198 aaKnown RBP13.19□□□□□ -0.3
SPG7-216ENST00000567138 RBL2Q08999 1139 aa13.19□□□□□ -0.3
SPG7-216ENST00000567138 PTCRAQ6ISU1 281 aaPredicted RBP13.19□□□□□ -0.3
SPG7-216ENST00000567138 GJD3Q8N144 294 aa13.19□□□□□ -0.3
SPG7-216ENST00000567138 FBXO22Q8NEZ5 403 aa13.19□□□□□ -0.3
SPG7-216ENST00000567138 TBC1D5Q92609 795 aa13.19□□□□□ -0.3
SPG7-216ENST00000567138 WNT8BQ93098 351 aa13.19□□□□□ -0.3
SPG7-216ENST00000567138 UIMC1Q96RL1 719 aa13.19□□□□□ -0.3
SPG7-216ENST00000567138 C17orf80Q9BSJ5 609 aa13.19□□□□□ -0.3
SPG7-216ENST00000567138 GTF2IRD1Q9UHL9 959 aa13.19□□□□□ -0.3
SPG7-216ENST00000567138 PNMA2Q9UL42 364 aa13.19□□□□□ -0.3
SPG7-216ENST00000567138 ZNF318Q5VUA4 2279 aa13.18□□□□□ -0.3
SPG7-216ENST00000567138 ABHD14A-ACY1A0A1B0GW23 586 aa13.18□□□□□ -0.3
SPG7-216ENST00000567138 PRR33A8MZF0 331 aa13.18□□□□□ -0.3
SPG7-216ENST00000567138 FGRP09769 529 aa13.18□□□□□ -0.3
SPG7-216ENST00000567138 CASTP20810 708 aaKnown RBP13.18□□□□□ -0.3
SPG7-216ENST00000567138 HAND2P61296 217 aa13.18□□□□□ -0.3
SPG7-216ENST00000567138 MBTPS1Q14703 1052 aa13.18□□□□□ -0.3
SPG7-216ENST00000567138 MFSD10Q14728 455 aa13.18□□□□□ -0.3
SPG7-216ENST00000567138 ZNF618Q5T7W0 954 aa13.18□□□□□ -0.3
SPG7-216ENST00000567138 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.18□□□□□ -0.3
SPG7-216ENST00000567138 C7orf31Q8N865 590 aa13.18□□□□□ -0.3
SPG7-216ENST00000567138 TAAR1Q96RJ0 339 aa13.18□□□□□ -0.3
SPG7-216ENST00000567138 COL20A1Q9P218 1284 aa13.18□□□□□ -0.3
SPG7-216ENST00000567138 KAT6AQ92794 2004 aa13.17□□□□□ -0.3
SPG7-216ENST00000567138 SALL3Q9BXA9 1300 aa13.17□□□□□ -0.3
SPG7-216ENST00000567138 PARNO95453 639 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms