RNA–Protein interactions for RNA: ENST00000567015.5

UTP4-208, Transcript of UTP4, small subunit processome component, human

TSL 2

Gene UTP4, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UTP4-208	ENST00000567015	ZNF713	Q8N859	430 aa	Predicted RBP	13.65	□□□□□ -0.22
UTP4-208	ENST00000567015	POLR3E	Q9NVU0	708 aa		13.65	□□□□□ -0.22
UTP4-208	ENST00000567015	SEC63	Q9UGP8	760 aa	Known RBP	13.65	□□□□□ -0.22
UTP4-208	ENST00000567015	TBX21	Q9UL17	535 aa		13.65	□□□□□ -0.22
UTP4-208	ENST00000567015	KLF18	A0A0U1RQI7	1052 aa		13.64	□□□□□ -0.23
UTP4-208	ENST00000567015	DCDC2C	A8MYV0	355 aa		13.64	□□□□□ -0.23
UTP4-208	ENST00000567015	HOXD8	P13378	290 aa	Predicted RBP	13.64	□□□□□ -0.23
UTP4-208	ENST00000567015	ICAM3	P32942	547 aa		13.64	□□□□□ -0.23
UTP4-208	ENST00000567015	MRPS9	P82933	396 aa	Known RBP	13.64	□□□□□ -0.23
UTP4-208	ENST00000567015	PURA	Q00577	322 aa	Known RBP	13.64	□□□□□ -0.23
UTP4-208	ENST00000567015	ITGA7	Q13683	1181 aa		13.64	□□□□□ -0.23
UTP4-208	ENST00000567015	RTN1	Q16799	776 aa		13.64	□□□□□ -0.23
UTP4-208	ENST00000567015	XRRA1	Q6P2D8	792 aa		13.64	□□□□□ -0.23
UTP4-208	ENST00000567015	RUFY3	Q7L099	469 aa		13.64	□□□□□ -0.23
UTP4-208	ENST00000567015	COPS5	Q92905	334 aa		13.64	□□□□□ -0.23
UTP4-208	ENST00000567015	INPP4A	Q96PE3	977 aa	Predicted RBP	13.64	□□□□□ -0.23
UTP4-208	ENST00000567015	CCDC196	A0A1B0GTZ2	297 aa		13.63	□□□□□ -0.23
UTP4-208	ENST00000567015	GH1	P01241	217 aa		13.63	□□□□□ -0.23
UTP4-208	ENST00000567015	ITGB8	P26012	769 aa		13.63	□□□□□ -0.23
UTP4-208	ENST00000567015	ARHGAP1	Q07960	439 aa		13.63	□□□□□ -0.23
UTP4-208	ENST00000567015	NTRK3	Q16288	839 aa		13.63	□□□□□ -0.23
UTP4-208	ENST00000567015	LY6K	Q17RY6	165 aa		13.63	□□□□□ -0.23
UTP4-208	ENST00000567015	LRIT3	Q3SXY7	679 aa		13.63	□□□□□ -0.23
UTP4-208	ENST00000567015	BRDT	Q58F21	947 aa	Predicted RBP	13.63	□□□□□ -0.23
UTP4-208	ENST00000567015	SEPT14	Q6ZU15	432 aa		13.63	□□□□□ -0.23
UTP4-208	ENST00000567015	RAB11FIP4	Q86YS3	637 aa		13.63	□□□□□ -0.23
UTP4-208	ENST00000567015	OR6J1	Q8NGC5	347 aa		13.63	□□□□□ -0.23
UTP4-208	ENST00000567015	IL31RA	Q8NI17	732 aa		13.63	□□□□□ -0.23
UTP4-208	ENST00000567015	BRF1	Q92994	677 aa		13.63	□□□□□ -0.23
UTP4-208	ENST00000567015	PSTPIP2	Q9H939	334 aa		13.63	□□□□□ -0.23
UTP4-208	ENST00000567015	PRKAG2	Q9UGJ0	569 aa		13.63	□□□□□ -0.23
UTP4-208	ENST00000567015	GOLGA8A	A7E2F4	631 aa		13.62	□□□□□ -0.23
UTP4-208	ENST00000567015	GOLGA8B	A8MQT2	603 aa		13.62	□□□□□ -0.23
UTP4-208	ENST00000567015	CAST	P20810	708 aa	Known RBP	13.62	□□□□□ -0.23
UTP4-208	ENST00000567015	CCND2	P30279	289 aa		13.62	□□□□□ -0.23
UTP4-208	ENST00000567015	ADD1	P35611	737 aa	Known RBP	13.62	□□□□□ -0.23
UTP4-208	ENST00000567015	ANAPC15	P60006	121 aa		13.62	□□□□□ -0.23
UTP4-208	ENST00000567015	APOBR	Q0VD83	1088 aa		13.62	□□□□□ -0.23
UTP4-208	ENST00000567015	LAMC2	Q13753	1193 aa		13.62	□□□□□ -0.23
UTP4-208	ENST00000567015	TOB2	Q14106	344 aa	Predicted RBP	13.62	□□□□□ -0.23
UTP4-208	ENST00000567015	PCNX4	Q63HM2	1172 aa		13.62	□□□□□ -0.23
UTP4-208	ENST00000567015	TYW1B	Q6NUM6	668 aa		13.62	□□□□□ -0.23
UTP4-208	ENST00000567015	PPP1R18	Q6NYC8	613 aa		13.62	□□□□□ -0.23
UTP4-208	ENST00000567015	USP17L6P	Q6QN14	398 aa		13.62	□□□□□ -0.23
UTP4-208	ENST00000567015	FCHSD1	Q86WN1	690 aa		13.62	□□□□□ -0.23
UTP4-208	ENST00000567015	TDH	Q8IZJ6	230 aa		13.62	□□□□□ -0.23
UTP4-208	ENST00000567015	CCDC82	Q8N4S0	544 aa		13.62	□□□□□ -0.23
UTP4-208	ENST00000567015	PIBF1	Q8WXW3	757 aa		13.62	□□□□□ -0.23
UTP4-208	ENST00000567015	MTG1	Q9BT17	334 aa	Predicted RBP	13.62	□□□□□ -0.23
UTP4-208	ENST00000567015	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	13.62	□□□□□ -0.23
UTP4-208	ENST00000567015		V9GY48	417 aa	Predicted RBP	13.62	□□□□□ -0.23
UTP4-208	ENST00000567015	PQBP1	O60828	265 aa	Known RBP	13.61	□□□□□ -0.23
UTP4-208	ENST00000567015	EIF5B	O60841	1220 aa	Known RBP	13.61	□□□□□ -0.23
UTP4-208	ENST00000567015	TIMP1	P01033	207 aa		13.61	□□□□□ -0.23
UTP4-208	ENST00000567015	MMP3	P08254	477 aa		13.61	□□□□□ -0.23
UTP4-208	ENST00000567015	PDIA3	P30101	505 aa	Known RBP	13.61	□□□□□ -0.23
UTP4-208	ENST00000567015	METAP2	P50579	478 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
UTP4-208	ENST00000567015	MDM2	Q00987	491 aa	Predicted RBP	13.61	□□□□□ -0.23
UTP4-208	ENST00000567015	SP2	Q02086	613 aa		13.61	□□□□□ -0.23
UTP4-208	ENST00000567015	PTPN11	Q06124	597 aa	Predicted RBP	13.61	□□□□□ -0.23
UTP4-208	ENST00000567015	PFKFB3	Q16875	520 aa	Predicted RBP	13.61	□□□□□ -0.23
UTP4-208	ENST00000567015	MYSM1	Q5VVJ2	828 aa		13.61	□□□□□ -0.23
UTP4-208	ENST00000567015	WWC2	Q6AWC2	1192 aa		13.61	□□□□□ -0.23
UTP4-208	ENST00000567015	GPR153	Q6NV75	609 aa		13.61	□□□□□ -0.23
UTP4-208	ENST00000567015	NFRKB	Q6P4R8	1299 aa		13.61	□□□□□ -0.23
UTP4-208	ENST00000567015	PPTC7	Q8NI37	304 aa		13.61	□□□□□ -0.23
UTP4-208	ENST00000567015	BAD	Q92934	168 aa		13.61	□□□□□ -0.23
UTP4-208	ENST00000567015	CUL5	Q93034	780 aa		13.61	□□□□□ -0.23
UTP4-208	ENST00000567015	LBHD1	Q9BQE6	289 aa	Predicted RBP	13.61	□□□□□ -0.23
UTP4-208	ENST00000567015	UBE2O	Q9C0C9	1292 aa	Known RBP	13.61	□□□□□ -0.23
UTP4-208	ENST00000567015	TMEM39A	Q9NV64	488 aa		13.61	□□□□□ -0.23
UTP4-208	ENST00000567015	BARHL2	Q9NY43	387 aa		13.61	□□□□□ -0.23
UTP4-208	ENST00000567015	hCG_1642624	A0A1W2PR95	340 aa		13.6	□□□□□ -0.23
UTP4-208	ENST00000567015	ESYT2	A0FGR8	921 aa		13.6	□□□□□ -0.23
UTP4-208	ENST00000567015	SPATA31C2	B4DYI2	1134 aa		13.6	□□□□□ -0.23
UTP4-208	ENST00000567015	TLR3	O15455	904 aa	Known RBP	13.6	□□□□□ -0.23
UTP4-208	ENST00000567015	PRPF3	O43395	683 aa	Known RBP	13.6	□□□□□ -0.23
UTP4-208	ENST00000567015	PPFIA4	O75335	1185 aa		13.6	□□□□□ -0.23
UTP4-208	ENST00000567015	MYCL	P12524	364 aa	Predicted RBP	13.6	□□□□□ -0.23
UTP4-208	ENST00000567015	IFNAR1	P17181	557 aa		13.6	□□□□□ -0.23
UTP4-208	ENST00000567015	CLK2	P49760	499 aa	Known RBP	13.6	□□□□□ -0.23
UTP4-208	ENST00000567015	SEMA3F	Q13275	785 aa		13.6	□□□□□ -0.23
UTP4-208	ENST00000567015	PKN1	Q16512	942 aa		13.6	□□□□□ -0.23
UTP4-208	ENST00000567015	CELF3	Q5SZQ8	465 aa	Known RBP	13.6	□□□□□ -0.23
UTP4-208	ENST00000567015	SESTD1	Q86VW0	696 aa		13.6	□□□□□ -0.23
UTP4-208	ENST00000567015	SMARCC2	Q8TAQ2	1214 aa		13.6	□□□□□ -0.23
UTP4-208	ENST00000567015	AFG1L	Q8WV93	481 aa		13.6	□□□□□ -0.23
UTP4-208	ENST00000567015	KAT2B	Q92831	832 aa		13.6	□□□□□ -0.23
UTP4-208	ENST00000567015	VTI1A	Q96AJ9	217 aa		13.6	□□□□□ -0.23
UTP4-208	ENST00000567015	ZNF274	Q96GC6	653 aa	Predicted RBP	13.6	□□□□□ -0.23
UTP4-208	ENST00000567015	SENP7	Q9BQF6	1050 aa		13.6	□□□□□ -0.23
UTP4-208	ENST00000567015	GLT8D2	Q9H1C3	349 aa		13.6	□□□□□ -0.23
UTP4-208	ENST00000567015	RIC8A	Q9NPQ8	531 aa		13.6	□□□□□ -0.23
UTP4-208	ENST00000567015	CYP46A1	Q9Y6A2	500 aa		13.6	□□□□□ -0.23
UTP4-208	ENST00000567015	MRVI1	Q9Y6F6	885 aa		13.6	□□□□□ -0.23
UTP4-208	ENST00000567015	STXBP3	O00186	592 aa		13.59	□□□□□ -0.23
UTP4-208	ENST00000567015	HAS3	O00219	553 aa		13.59	□□□□□ -0.23
UTP4-208	ENST00000567015	FOS	P01100	380 aa	Predicted RBP	13.59	□□□□□ -0.23
UTP4-208	ENST00000567015	PSMC6	P62333	389 aa		13.59	□□□□□ -0.23
UTP4-208	ENST00000567015	FGD1	P98174	961 aa		13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms