RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 BMP8BP34820 402 aa11.72□□□□□ -0.53
GTF3C1-206ENST00000566779 COL9A3Q14050 684 aaPredicted RBP11.72□□□□□ -0.53
GTF3C1-206ENST00000566779 DUSP28Q4G0W2 176 aa11.72□□□□□ -0.53
GTF3C1-206ENST00000566779 FAM47CQ5HY64 1035 aa11.72□□□□□ -0.53
GTF3C1-206ENST00000566779 RNF20Q5VTR2 975 aa11.72□□□□□ -0.53
GTF3C1-206ENST00000566779 IQSEC1Q6DN90 963 aa11.72□□□□□ -0.53
GTF3C1-206ENST00000566779 CCSAPQ6IQ19 270 aaPredicted RBP11.72□□□□□ -0.53
GTF3C1-206ENST00000566779 MICU3Q86XE3 530 aa11.72□□□□□ -0.53
GTF3C1-206ENST00000566779 CMTR1Q8N1G2 835 aaKnown RBP11.72□□□□□ -0.53
GTF3C1-206ENST00000566779 SCFD2Q8WU76 684 aa11.72□□□□□ -0.53
GTF3C1-206ENST00000566779 LY9Q9HBG7 655 aa11.72□□□□□ -0.53
GTF3C1-206ENST00000566779 SCN10AQ9Y5Y9 1956 aa11.72□□□□□ -0.53
GTF3C1-206ENST00000566779 TANC1Q9C0D5 1861 aa11.72□□□□□ -0.53
GTF3C1-206ENST00000566779 ELP1O95163 1332 aa11.71□□□□□ -0.53
GTF3C1-206ENST00000566779 MROH7Q68CQ1 1323 aa11.71□□□□□ -0.53
GTF3C1-206ENST00000566779 hCG_1642624A0A1W2PR95 340 aa11.71□□□□□ -0.53
GTF3C1-206ENST00000566779 ARVCFO00192 962 aa11.71□□□□□ -0.53
GTF3C1-206ENST00000566779 SH2B2O14492 632 aaPredicted RBP11.71□□□□□ -0.53
GTF3C1-206ENST00000566779 CTAGE5O15320 804 aa11.71□□□□□ -0.53
GTF3C1-206ENST00000566779 DDAH1O94760 285 aa11.71□□□□□ -0.53
GTF3C1-206ENST00000566779 KIF5BP33176 963 aa11.71□□□□□ -0.53
GTF3C1-206ENST00000566779 FGD1P98174 961 aa11.71□□□□□ -0.53
GTF3C1-206ENST00000566779 TTLL4Q14679 1199 aa11.71□□□□□ -0.53
GTF3C1-206ENST00000566779 SLC35G1Q2M3R5 365 aa11.71□□□□□ -0.53
GTF3C1-206ENST00000566779 BRDTQ58F21 947 aaPredicted RBP11.71□□□□□ -0.53
GTF3C1-206ENST00000566779 C9orf50Q5SZB4 431 aa11.71□□□□□ -0.53
GTF3C1-206ENST00000566779 Q7L0L9 218 aa11.71□□□□□ -0.53
GTF3C1-206ENST00000566779 CCDC82Q8N4S0 544 aa11.71□□□□□ -0.53
GTF3C1-206ENST00000566779 DNERQ8NFT8 737 aa11.71□□□□□ -0.53
GTF3C1-206ENST00000566779 MORC4Q8TE76 937 aa11.71□□□□□ -0.53
GTF3C1-206ENST00000566779 NSUN6Q8TEA1 469 aaKnown RBP11.71□□□□□ -0.53
GTF3C1-206ENST00000566779 DAXXQ9UER7 740 aaPredicted RBP11.71□□□□□ -0.53
GTF3C1-206ENST00000566779 SEC63Q9UGP8 760 aaKnown RBP11.71□□□□□ -0.53
GTF3C1-206ENST00000566779 DNAH12Q6ZR08 3092 aa11.71□□□□□ -0.54
GTF3C1-206ENST00000566779 KAT6AQ92794 2004 aa11.7□□□□□ -0.54
GTF3C1-206ENST00000566779 CYTH3O43739 400 aa11.7□□□□□ -0.54
GTF3C1-206ENST00000566779 ARIH2O95376 493 aa11.7□□□□□ -0.54
GTF3C1-206ENST00000566779 PLEKHA8P1O95397 391 aa11.7□□□□□ -0.54
GTF3C1-206ENST00000566779 ITGB8P26012 769 aa11.7□□□□□ -0.54
GTF3C1-206ENST00000566779 CPT1AP50416 773 aa11.7□□□□□ -0.54
GTF3C1-206ENST00000566779 FPGSQ05932 587 aa11.7□□□□□ -0.54
GTF3C1-206ENST00000566779 FAAP100Q0VG06 881 aa11.7□□□□□ -0.54
GTF3C1-206ENST00000566779 TROAPQ12815 778 aa11.7□□□□□ -0.54
GTF3C1-206ENST00000566779 ITGA7Q13683 1181 aa11.7□□□□□ -0.54
GTF3C1-206ENST00000566779 SHHQ15465 462 aa11.7□□□□□ -0.54
GTF3C1-206ENST00000566779 C1orf53Q5VUE5 145 aa11.7□□□□□ -0.54
GTF3C1-206ENST00000566779 IGDCC4Q8TDY8 1250 aa11.7□□□□□ -0.54
GTF3C1-206ENST00000566779 RRP36Q96EU6 259 aaKnown RBP11.7□□□□□ -0.54
GTF3C1-206ENST00000566779 FAM161BQ96MY7 647 aa11.7□□□□□ -0.54
GTF3C1-206ENST00000566779 PXMP2Q9NR77 195 aa11.7□□□□□ -0.54
GTF3C1-206ENST00000566779 SLC12A7Q9Y666 1083 aa11.7□□□□□ -0.54
GTF3C1-206ENST00000566779 MRVI1Q9Y6F6 885 aa11.7□□□□□ -0.54
GTF3C1-206ENST00000566779 PNMA6FA0A0J9YX94 578 aa11.69□□□□□ -0.54
GTF3C1-206ENST00000566779 GCOM1H8Y6P7 765 aaPredicted RBP11.69□□□□□ -0.54
GTF3C1-206ENST00000566779 OPLAHO14841 1288 aa11.69□□□□□ -0.54
GTF3C1-206ENST00000566779 GABBR2O75899 941 aa11.69□□□□□ -0.54
GTF3C1-206ENST00000566779 CABYRO75952 493 aa11.69□□□□□ -0.54
GTF3C1-206ENST00000566779 SEC24BO95487 1268 aa11.69□□□□□ -0.54
GTF3C1-206ENST00000566779 POLR2MP0CAP2 368 aa11.69□□□□□ -0.54
GTF3C1-206ENST00000566779 EDNRBP24530 442 aa11.69□□□□□ -0.54
GTF3C1-206ENST00000566779 CYP2C18P33260 490 aa11.69□□□□□ -0.54
GTF3C1-206ENST00000566779 STXBP2Q15833 593 aa11.69□□□□□ -0.54
GTF3C1-206ENST00000566779 LY6KQ17RY6 165 aa11.69□□□□□ -0.54
GTF3C1-206ENST00000566779 SYNE3Q6ZMZ3 975 aa11.69□□□□□ -0.54
GTF3C1-206ENST00000566779 ANKRD33Q7Z3H0 272 aa11.69□□□□□ -0.54
GTF3C1-206ENST00000566779 FAM126BQ8IXS8 530 aa11.69□□□□□ -0.54
GTF3C1-206ENST00000566779 RGS22Q8NE09 1264 aa11.69□□□□□ -0.54
GTF3C1-206ENST00000566779 IL31RAQ8NI17 732 aa11.69□□□□□ -0.54
GTF3C1-206ENST00000566779 TMEM87BQ96K49 555 aa11.69□□□□□ -0.54
GTF3C1-206ENST00000566779 RNPC3Q96LT9 517 aaKnown RBP11.69□□□□□ -0.54
GTF3C1-206ENST00000566779 TRPV6Q9H1D0 765 aa11.69□□□□□ -0.54
GTF3C1-206ENST00000566779 POLR3EQ9NVU0 708 aa11.69□□□□□ -0.54
GTF3C1-206ENST00000566779 MYO9BQ13459 2157 aa11.69□□□□□ -0.54
GTF3C1-206ENST00000566779 LOC102724159A0A0B4J2E5 919 aa11.68□□□□□ -0.54
GTF3C1-206ENST00000566779 KIAA0355O15063 1070 aa11.68□□□□□ -0.54
GTF3C1-206ENST00000566779 GH1P01241 217 aa11.68□□□□□ -0.54
GTF3C1-206ENST00000566779 NR3C2P08235 984 aa11.68□□□□□ -0.54
GTF3C1-206ENST00000566779 CPA1P15085 419 aa11.68□□□□□ -0.54
GTF3C1-206ENST00000566779 HSD17B4P51659 736 aa11.68□□□□□ -0.54
GTF3C1-206ENST00000566779 EPHB4P54760 987 aa11.68□□□□□ -0.54
GTF3C1-206ENST00000566779 NECTIN1Q15223 517 aa11.68□□□□□ -0.54
GTF3C1-206ENST00000566779 PWP2Q15269 919 aaKnown RBP11.68□□□□□ -0.54
GTF3C1-206ENST00000566779 DEFB123Q8N688 67 aa11.68□□□□□ -0.54
GTF3C1-206ENST00000566779 SMARCC2Q8TAQ2 1214 aa11.68□□□□□ -0.54
GTF3C1-206ENST00000566779 AFG1LQ8WV93 481 aa11.68□□□□□ -0.54
GTF3C1-206ENST00000566779 GPKOWQ92917 476 aaPredicted RBP eCLIP11.68□□□□□ -0.54
GTF3C1-206ENST00000566779 CUL5Q93034 780 aa11.68□□□□□ -0.54
GTF3C1-206ENST00000566779 MTMR8Q96EF0 704 aa11.68□□□□□ -0.54
GTF3C1-206ENST00000566779 TOX2Q96NM4 488 aa11.68□□□□□ -0.54
GTF3C1-206ENST00000566779 NEK1Q96PY6 1258 aa11.68□□□□□ -0.54
GTF3C1-206ENST00000566779 RIOX1Q9H6W3 641 aa11.68□□□□□ -0.54
GTF3C1-206ENST00000566779 TRMT13Q9NUP7 481 aaKnown RBP11.68□□□□□ -0.54
GTF3C1-206ENST00000566779 TBX21Q9UL17 535 aa11.68□□□□□ -0.54
GTF3C1-206ENST00000566779 NOD1Q9Y239 953 aa11.68□□□□□ -0.54
GTF3C1-206ENST00000566779 Q9Y3F1 56 aa11.68□□□□□ -0.54
GTF3C1-206ENST00000566779 UMODL1Q5DID0 1318 aa11.67□□□□□ -0.54
GTF3C1-206ENST00000566779 RBM47A0AV96 593 aaKnown RBP11.67□□□□□ -0.54
GTF3C1-206ENST00000566779 NKRFO15226 690 aaKnown RBP eCLIP11.67□□□□□ -0.54
GTF3C1-206ENST00000566779 B4GALT4O60513 344 aa11.67□□□□□ -0.54
GTF3C1-206ENST00000566779 ZNF286BP0CG31 522 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms