RNA–Protein interactions for RNA: ENST00000566772.1

KARS-208, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 644 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-208ENST00000566772 NFICP08651 508 aa7.39□□□□□ -1.23
KARS-208ENST00000566772 YBX3P16989 372 aaKnown RBP eCLIP7.39□□□□□ -1.231e-12■■■□□ 14.9
KARS-208ENST00000566772 USP11P51784 963 aa7.39□□□□□ -1.23
KARS-208ENST00000566772 NMIQ13287 307 aaPredicted RBP7.39□□□□□ -1.23
KARS-208ENST00000566772 GBX1Q14549 363 aa7.39□□□□□ -1.23
KARS-208ENST00000566772 DDB1Q16531 1140 aa7.39□□□□□ -1.23
KARS-208ENST00000566772 ANKRD34AQ69YU3 496 aa7.39□□□□□ -1.23
KARS-208ENST00000566772 CDPF1Q6NVV7 123 aa7.39□□□□□ -1.23
KARS-208ENST00000566772 CMTR2Q8IYT2 770 aaKnown RBP7.39□□□□□ -1.23
KARS-208ENST00000566772 DTWD2Q8NBA8 298 aa7.39□□□□□ -1.23
KARS-208ENST00000566772 RCBTB1Q8NDN9 531 aa7.39□□□□□ -1.23
KARS-208ENST00000566772 DIO2Q92813 273 aa7.39□□□□□ -1.23
KARS-208ENST00000566772 E2F7Q96AV8 911 aa7.39□□□□□ -1.23
KARS-208ENST00000566772 HSPBAP1Q96EW2 488 aa7.39□□□□□ -1.23
KARS-208ENST00000566772 Q96M66 194 aa7.39□□□□□ -1.23
KARS-208ENST00000566772 MRPL18Q9H0U6 180 aaKnown RBP7.39□□□□□ -1.23
KARS-208ENST00000566772 SEMA6CQ9H3T2 930 aa7.39□□□□□ -1.23
KARS-208ENST00000566772 IPPKQ9H8X2 491 aa7.39□□□□□ -1.23
KARS-208ENST00000566772 MKS1Q9NXB0 559 aa7.39□□□□□ -1.23
KARS-208ENST00000566772 TPX2Q9ULW0 747 aaKnown RBP7.39□□□□□ -1.23
KARS-208ENST00000566772 FAM50BQ9Y247 325 aa7.39□□□□□ -1.23
KARS-208ENST00000566772 FRMPD2Q68DX3 1309 aaPredicted RBP7.38□□□□□ -1.23
KARS-208ENST00000566772 SHISA3A0PJX4 238 aa7.38□□□□□ -1.23
KARS-208ENST00000566772 CFBP00751 764 aa7.38□□□□□ -1.23
KARS-208ENST00000566772 BCRP11274 1271 aa7.38□□□□□ -1.23
KARS-208ENST00000566772 HOXB4P17483 251 aaPredicted RBP7.38□□□□□ -1.23
KARS-208ENST00000566772 CYP7A1P22680 504 aa7.38□□□□□ -1.23
KARS-208ENST00000566772 PREPP48147 710 aa7.38□□□□□ -1.23
KARS-208ENST00000566772 SEPHS1P49903 392 aa7.38□□□□□ -1.23
KARS-208ENST00000566772 SCAND1P57086 179 aa7.38□□□□□ -1.23
KARS-208ENST00000566772 HTRA3P83110 453 aa7.38□□□□□ -1.23
KARS-208ENST00000566772 GALEQ14376 348 aa7.38□□□□□ -1.23
KARS-208ENST00000566772 LRRC32Q14392 662 aa7.38□□□□□ -1.23
KARS-208ENST00000566772 HSP90AB4PQ58FF6 505 aa7.38□□□□□ -1.23
KARS-208ENST00000566772 E4F1Q66K89 784 aaPredicted RBP7.38□□□□□ -1.23
KARS-208ENST00000566772 IGF2-ASQ6U949 168 aa7.38□□□□□ -1.23
KARS-208ENST00000566772 TREML4Q6UXN2 200 aa7.38□□□□□ -1.23
KARS-208ENST00000566772 TICAM2Q86XR7 235 aa7.38□□□□□ -1.23
KARS-208ENST00000566772 CISD2Q8N5K1 135 aaKnown RBP7.38□□□□□ -1.23
KARS-208ENST00000566772 TOP6BLQ8N6T0 577 aa7.38□□□□□ -1.23
KARS-208ENST00000566772 C2orf69Q8N8R5 385 aa7.38□□□□□ -1.23
KARS-208ENST00000566772 FBXW5Q969U6 566 aa7.38□□□□□ -1.23
KARS-208ENST00000566772 SLC12A5Q9H2X9 1139 aa7.38□□□□□ -1.23
KARS-208ENST00000566772 PTPRHQ9HD43 1115 aa7.38□□□□□ -1.23
KARS-208ENST00000566772 RSF1Q96T23 1441 aaPredicted RBP7.37□□□□□ -1.23
KARS-208ENST00000566772 ALX3O95076 343 aa7.37□□□□□ -1.23
KARS-208ENST00000566772 IL33O95760 270 aa7.37□□□□□ -1.23
KARS-208ENST00000566772 CBX7O95931 251 aa7.37□□□□□ -1.23
KARS-208ENST00000566772 ASGR2P07307 311 aa7.37□□□□□ -1.23
KARS-208ENST00000566772 VSIG8P0DPA2 414 aa7.37□□□□□ -1.23
KARS-208ENST00000566772 NOP2P46087 812 aaKnown RBP7.37□□□□□ -1.23
KARS-208ENST00000566772 CDK5R2Q13319 367 aa7.37□□□□□ -1.23
KARS-208ENST00000566772 RGL3Q3MIN7 710 aa7.37□□□□□ -1.23
KARS-208ENST00000566772 FAM47CQ5HY64 1035 aa7.37□□□□□ -1.23
KARS-208ENST00000566772 FBLIM1Q8WUP2 373 aa7.37□□□□□ -1.23
KARS-208ENST00000566772 ASCC2Q9H1I8 757 aaPredicted RBP7.37□□□□□ -1.23
KARS-208ENST00000566772 PPCSQ9HAB8 311 aa7.37□□□□□ -1.23
KARS-208ENST00000566772 PPARGC1AQ9UBK2 798 aaKnown RBP7.37□□□□□ -1.23
KARS-208ENST00000566772 SAP30BPQ9UHR5 308 aaKnown RBP7.37□□□□□ -1.23
KARS-208ENST00000566772 KCNH3Q9ULD8 1083 aa7.37□□□□□ -1.23
KARS-208ENST00000566772 CBLCQ9ULV8 474 aa7.37□□□□□ -1.23
KARS-208ENST00000566772 ANO9A1A5B4 782 aa7.36□□□□□ -1.23
KARS-208ENST00000566772 F8W735 103 aaPredicted RBP7.36□□□□□ -1.23
KARS-208ENST00000566772 WNT9AO14904 365 aa7.36□□□□□ -1.23
KARS-208ENST00000566772 XPOTO43592 962 aaKnown RBP7.36□□□□□ -1.23
KARS-208ENST00000566772 H2AFYO75367 372 aaKnown RBP7.36□□□□□ -1.23
KARS-208ENST00000566772 ST5P78524 1137 aa7.36□□□□□ -1.23
KARS-208ENST00000566772 KCNAB2Q13303 367 aa7.36□□□□□ -1.23
KARS-208ENST00000566772 INF2Q27J81 1249 aa7.36□□□□□ -1.23
KARS-208ENST00000566772 KIZQ2M2Z5 673 aa7.36□□□□□ -1.23
KARS-208ENST00000566772 C16orf59Q7L2K0 433 aa7.36□□□□□ -1.23
KARS-208ENST00000566772 MORC1Q86VD1 984 aa7.36□□□□□ -1.23
KARS-208ENST00000566772 EFHBQ8N7U6 833 aa7.36□□□□□ -1.23
KARS-208ENST00000566772 TRIM11Q96F44 468 aa7.36□□□□□ -1.23
KARS-208ENST00000566772 AIFM3Q96NN9 605 aa7.36□□□□□ -1.23
KARS-208ENST00000566772 STRBPQ96SI9 672 aaKnown RBP7.36□□□□□ -1.23
KARS-208ENST00000566772 SLC12A9Q9BXP2 914 aa7.36□□□□□ -1.23
KARS-208ENST00000566772 MAF1Q9H063 256 aa7.36□□□□□ -1.23
KARS-208ENST00000566772 TOPORSQ9NS56 1045 aaPredicted RBP7.36□□□□□ -1.23
KARS-208ENST00000566772 GNL3LQ9NVN8 582 aaKnown RBP7.36□□□□□ -1.23
KARS-208ENST00000566772 GPATCH2Q9NW75 528 aa7.36□□□□□ -1.23
KARS-208ENST00000566772 PNMA2Q9UL42 364 aa7.36□□□□□ -1.23
KARS-208ENST00000566772 ZNF652Q9Y2D9 606 aa7.36□□□□□ -1.23
KARS-208ENST00000566772 PCDHA2Q9Y5H9 948 aa7.36□□□□□ -1.23
KARS-208ENST00000566772 MRFAP1Q9Y605 127 aa7.36□□□□□ -1.23
KARS-208ENST00000566772 EIF4G3O43432 1585 aaKnown RBP7.36□□□□□ -1.23
KARS-208ENST00000566772 ZNF608Q9ULD9 1512 aaPredicted RBP7.36□□□□□ -1.23
KARS-208ENST00000566772 ERBB4Q15303 1308 aa7.35□□□□□ -1.23
KARS-208ENST00000566772 KLHL33A6NCF5 533 aa7.35□□□□□ -1.23
KARS-208ENST00000566772 GOLGA8AA7E2F4 631 aa7.35□□□□□ -1.23
KARS-208ENST00000566772 GOLGA8BA8MQT2 603 aa7.35□□□□□ -1.23
KARS-208ENST00000566772 FAM229AH3BQW9 127 aa7.35□□□□□ -1.23
KARS-208ENST00000566772 ERC2O15083 957 aa7.35□□□□□ -1.23
KARS-208ENST00000566772 SART1O43290 800 aaKnown RBP7.35□□□□□ -1.23
KARS-208ENST00000566772 LEFTY1O75610 366 aa7.35□□□□□ -1.23
KARS-208ENST00000566772 KRT37O76014 449 aa7.35□□□□□ -1.23
KARS-208ENST00000566772 SERPINB3P29508 390 aa7.35□□□□□ -1.23
KARS-208ENST00000566772 HTR3AP46098 478 aa7.35□□□□□ -1.23
KARS-208ENST00000566772 KRT85P78386 507 aa7.35□□□□□ -1.23
KARS-208ENST00000566772 SAFBQ15424 915 aaKnown RBP eCLIP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms