RNA–Protein interactions for RNA: ENST00000566633.1

PDXDC1-214, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 2,597 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-214ENST00000566633 VCAM1P19320 739 aa12.13□□□□□ -0.47
PDXDC1-214ENST00000566633 CLK2P49760 499 aaKnown RBP12.13□□□□□ -0.47
PDXDC1-214ENST00000566633 POTEDQ86YR6 584 aa12.13□□□□□ -0.47
PDXDC1-214ENST00000566633 ZNF713Q8N859 430 aaPredicted RBP12.13□□□□□ -0.47
PDXDC1-214ENST00000566633 AGBL1Q96MI9 1066 aa12.13□□□□□ -0.47
PDXDC1-214ENST00000566633 PANX2Q96RD6 677 aa12.13□□□□□ -0.47
PDXDC1-214ENST00000566633 PLIN2Q99541 437 aa12.13□□□□□ -0.47
PDXDC1-214ENST00000566633 CCSER1Q9C0I3 900 aa12.13□□□□□ -0.47
PDXDC1-214ENST00000566633 ZNF112Q9UJU3 913 aa12.13□□□□□ -0.47
PDXDC1-214ENST00000566633 PHLPP2Q6ZVD8 1323 aa12.13□□□□□ -0.47
PDXDC1-214ENST00000566633 SSC5DA1L4H1 1573 aa12.13□□□□□ -0.47
PDXDC1-214ENST00000566633 GLTPD2A6NH11 291 aa12.12□□□□□ -0.47
PDXDC1-214ENST00000566633 AKR1B15C9JRZ8 316 aaPredicted RBP12.12□□□□□ -0.47
PDXDC1-214ENST00000566633 COBLO75128 1261 aa12.12□□□□□ -0.47
PDXDC1-214ENST00000566633 FLOT1O75955 427 aa12.12□□□□□ -0.47
PDXDC1-214ENST00000566633 SUPT20HL1Q3ZLR7 823 aa12.12□□□□□ -0.47
PDXDC1-214ENST00000566633 IGSF22Q8N9C0 903 aa12.12□□□□□ -0.47
PDXDC1-214ENST00000566633 CHURC1Q8WUH1 139 aa12.12□□□□□ -0.47
PDXDC1-214ENST00000566633 WNK4Q96J92 1243 aa12.12□□□□□ -0.47
PDXDC1-214ENST00000566633 LIMA1Q9UHB6 759 aaKnown RBP12.12□□□□□ -0.47
PDXDC1-214ENST00000566633 DNAI1Q9UI46 699 aa12.12□□□□□ -0.47
PDXDC1-214ENST00000566633 POTECB2RU33 542 aa12.12□□□□□ -0.47
PDXDC1-214ENST00000566633 FANCGO15287 622 aa12.12□□□□□ -0.47
PDXDC1-214ENST00000566633 CFBP00751 764 aa12.12□□□□□ -0.47
PDXDC1-214ENST00000566633 UBA7P41226 1012 aa12.12□□□□□ -0.47
PDXDC1-214ENST00000566633 RBL2Q08999 1139 aa12.12□□□□□ -0.47
PDXDC1-214ENST00000566633 PAK1Q13153 545 aa12.12□□□□□ -0.47
PDXDC1-214ENST00000566633 FILIP1LQ4L180 1135 aa12.12□□□□□ -0.47
PDXDC1-214ENST00000566633 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.12□□□□□ -0.47
PDXDC1-214ENST00000566633 TOGARAM2Q6ZUX3 1019 aa12.12□□□□□ -0.47
PDXDC1-214ENST00000566633 ZNF280CQ8ND82 737 aa12.12□□□□□ -0.47
PDXDC1-214ENST00000566633 KIAA1683Q9H0B3 1180 aa12.12□□□□□ -0.47
PDXDC1-214ENST00000566633 RPAP3Q9H6T3 665 aaPredicted RBP12.12□□□□□ -0.47
PDXDC1-214ENST00000566633 CGNQ9P2M7 1197 aaKnown RBP12.12□□□□□ -0.47
PDXDC1-214ENST00000566633 POLR2AP24928 1970 aaKnown RBP12.11□□□□□ -0.47
PDXDC1-214ENST00000566633 TECP42680 631 aa12.11□□□□□ -0.47
PDXDC1-214ENST00000566633 TXKP42681 527 aa12.11□□□□□ -0.47
PDXDC1-214ENST00000566633 PRCPP42785 496 aa12.11□□□□□ -0.47
PDXDC1-214ENST00000566633 BACE1P56817 501 aa12.11□□□□□ -0.47
PDXDC1-214ENST00000566633 UBXN2AP68543 259 aa12.11□□□□□ -0.47
PDXDC1-214ENST00000566633 VGLL4Q14135 290 aa12.11□□□□□ -0.47
PDXDC1-214ENST00000566633 NELFBQ8WX92 580 aa12.11□□□□□ -0.47
PDXDC1-214ENST00000566633 HOMER2Q9NSB8 354 aa12.11□□□□□ -0.47
PDXDC1-214ENST00000566633 KBTBD4Q9NVX7 518 aa12.11□□□□□ -0.47
PDXDC1-214ENST00000566633 SYNPO2Q9UMS6 1093 aa12.11□□□□□ -0.47
PDXDC1-214ENST00000566633 GOLGA6L9A6NEM1 432 aa12.11□□□□□ -0.47
PDXDC1-214ENST00000566633 MYL1P05976 194 aa12.11□□□□□ -0.47
PDXDC1-214ENST00000566633 KRT31Q15323 416 aa12.11□□□□□ -0.47
PDXDC1-214ENST00000566633 PPFIBP1Q86W92 1011 aa12.11□□□□□ -0.47
PDXDC1-214ENST00000566633 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.11□□□□□ -0.47
PDXDC1-214ENST00000566633 RAVER2Q9HCJ3 691 aaKnown RBP12.11□□□□□ -0.47
PDXDC1-214ENST00000566633 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.11□□□□□ -0.47
PDXDC1-214ENST00000566633 FEM1BQ9UK73 627 aa12.11□□□□□ -0.47
PDXDC1-214ENST00000566633 CLEC11AQ9Y240 323 aa12.11□□□□□ -0.47
PDXDC1-214ENST00000566633 GDAQ9Y2T3 454 aa12.11□□□□□ -0.47
PDXDC1-214ENST00000566633 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.11□□□□□ -0.473e-8■■□□□ 11.5
PDXDC1-214ENST00000566633 V9GYY5 206 aaPredicted RBP12.11□□□□□ -0.47
PDXDC1-214ENST00000566633 SMCHD1A6NHR9 2005 aa12.1□□□□□ -0.47
PDXDC1-214ENST00000566633 KLRC4O43908 158 aa12.1□□□□□ -0.47
PDXDC1-214ENST00000566633 PEX10O60683 326 aa12.1□□□□□ -0.47
PDXDC1-214ENST00000566633 TTLL12Q14166 644 aaPredicted RBP12.1□□□□□ -0.47
PDXDC1-214ENST00000566633 KCNB1Q14721 858 aa12.1□□□□□ -0.47
PDXDC1-214ENST00000566633 PPP1R18Q6NYC8 613 aa12.1□□□□□ -0.47
PDXDC1-214ENST00000566633 LDHDQ86WU2 507 aa12.1□□□□□ -0.47
PDXDC1-214ENST00000566633 ADSSL1Q8N142 457 aa12.1□□□□□ -0.47
PDXDC1-214ENST00000566633 LRRC15Q8TF66 581 aa12.1□□□□□ -0.47
PDXDC1-214ENST00000566633 CLMNQ96JQ2 1002 aa12.1□□□□□ -0.47
PDXDC1-214ENST00000566633 AK8Q96MA6 479 aa12.1□□□□□ -0.47
PDXDC1-214ENST00000566633 RANBP17Q9H2T7 1088 aaKnown RBP12.1□□□□□ -0.47
PDXDC1-214ENST00000566633 ITIH6Q6UXX5 1313 aa12.1□□□□□ -0.47
PDXDC1-214ENST00000566633 SPAG1Q07617 926 aa12.1□□□□□ -0.47
PDXDC1-214ENST00000566633 SEMA3FQ13275 785 aa12.1□□□□□ -0.47
PDXDC1-214ENST00000566633 TCP11X2Q5H9J9 407 aa12.1□□□□□ -0.47
PDXDC1-214ENST00000566633 RASSF8Q8NHQ8 419 aa12.1□□□□□ -0.47
PDXDC1-214ENST00000566633 CPLX3Q8WVH0 158 aa12.1□□□□□ -0.47
PDXDC1-214ENST00000566633 NAA15Q9BXJ9 866 aaKnown RBP12.1□□□□□ -0.47
PDXDC1-214ENST00000566633 ANO3Q9BYT9 981 aa12.1□□□□□ -0.47
PDXDC1-214ENST00000566633 TAF1DQ9H5J8 278 aaPredicted RBP12.1□□□□□ -0.47
PDXDC1-214ENST00000566633 ZNF408Q9H9D4 720 aa12.1□□□□□ -0.47
PDXDC1-214ENST00000566633 MAPK8IP1Q9UQF2 711 aa12.1□□□□□ -0.47
PDXDC1-214ENST00000566633 DICER1Q9UPY3 1922 aaKnown RBP12.09□□□□□ -0.47
PDXDC1-214ENST00000566633 N4BP3O15049 544 aa12.09□□□□□ -0.47
PDXDC1-214ENST00000566633 WDR46O15213 610 aaKnown RBP12.09□□□□□ -0.47
PDXDC1-214ENST00000566633 GRIN3BO60391 1043 aa12.09□□□□□ -0.47
PDXDC1-214ENST00000566633 OR52Z1P0C646 297 aa12.09□□□□□ -0.47
PDXDC1-214ENST00000566633 KMT5BQ4FZB7 885 aa12.09□□□□□ -0.47
PDXDC1-214ENST00000566633 MAP1SQ66K74 1059 aaPredicted RBP12.09□□□□□ -0.47
PDXDC1-214ENST00000566633 SLC30A10Q6XR72 485 aa12.09□□□□□ -0.47
PDXDC1-214ENST00000566633 PRPF38AQ8NAV1 312 aaKnown RBP12.09□□□□□ -0.47
PDXDC1-214ENST00000566633 CYP2W1Q8TAV3 490 aa12.09□□□□□ -0.47
PDXDC1-214ENST00000566633 HOOK2Q96ED9 719 aa12.09□□□□□ -0.47
PDXDC1-214ENST00000566633 L3MBTL3Q96JM7 780 aaPredicted RBP12.09□□□□□ -0.47
PDXDC1-214ENST00000566633 SLF1Q9BQI6 1058 aa12.09□□□□□ -0.47
PDXDC1-214ENST00000566633 PPP2R3BQ9Y5P8 575 aa12.09□□□□□ -0.47
PDXDC1-214ENST00000566633 SNCAIPQ9Y6H5 919 aa12.09□□□□□ -0.47
PDXDC1-214ENST00000566633 ZNF536O15090 1300 aa12.09□□□□□ -0.47
PDXDC1-214ENST00000566633 PITPNM2Q9BZ72 1349 aa12.09□□□□□ -0.47
PDXDC1-214ENST00000566633 KCNJ18B7U540 433 aa12.09□□□□□ -0.47
PDXDC1-214ENST00000566633 PPP1R12BO60237 982 aaPredicted RBP12.09□□□□□ -0.47
PDXDC1-214ENST00000566633 MFAP3LO75121 409 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms