RNA–Protein interactions for RNA: ENST00000566279.5

TCF4-231, Transcript of transcription factor 4, human

TSL 5 BASIC

Gene TCF4, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-231	ENST00000566279	TAL1	P17542	331 aa	Predicted RBP	11.44	□□□□□ -0.58
TCF4-231	ENST00000566279	IRX3	P78415	501 aa	Predicted RBP	11.44	□□□□□ -0.58
TCF4-231	ENST00000566279	LETM2	Q2VYF4	491 aa		11.44	□□□□□ -0.58
TCF4-231	ENST00000566279	SMCR8	Q8TEV9	937 aa	Predicted RBP	11.44	□□□□□ -0.58
TCF4-231	ENST00000566279	DCAF4	Q8WV16	495 aa		11.44	□□□□□ -0.58
TCF4-231	ENST00000566279	LPAR1	Q92633	364 aa		11.44	□□□□□ -0.58
TCF4-231	ENST00000566279	TXNRD2	Q9NNW7	524 aa		11.44	□□□□□ -0.58
TCF4-231	ENST00000566279	FANCL	Q9NW38	375 aa		11.44	□□□□□ -0.58
TCF4-231	ENST00000566279	DACH1	Q9UI36	760 aa		11.44	□□□□□ -0.58
TCF4-231	ENST00000566279	CENPF	P49454	3210 aa		11.44	□□□□□ -0.58
TCF4-231	ENST00000566279	PP2D1	A8MPX8	630 aa		11.44	□□□□□ -0.58
TCF4-231	ENST00000566279	USP17L15	C9J2P7	530 aa		11.44	□□□□□ -0.58
TCF4-231	ENST00000566279	USP17L13	C9JLJ4	530 aa		11.44	□□□□□ -0.58
TCF4-231	ENST00000566279	USP17L11	C9JVI0	530 aa		11.44	□□□□□ -0.58
TCF4-231	ENST00000566279	USP17L18	D6R9N7	530 aa		11.44	□□□□□ -0.58
TCF4-231	ENST00000566279	USP17L22	D6RA61	530 aa		11.44	□□□□□ -0.58
TCF4-231	ENST00000566279	USP17L17	D6RBQ6	530 aa		11.44	□□□□□ -0.58
TCF4-231	ENST00000566279	USP17L19	D6RCP7	530 aa		11.44	□□□□□ -0.58
TCF4-231	ENST00000566279	USP17L20	D6RJB6	530 aa		11.44	□□□□□ -0.58
TCF4-231	ENST00000566279	OR52Z1	P0C646	297 aa		11.44	□□□□□ -0.58
TCF4-231	ENST00000566279	BMP3	P12645	472 aa		11.44	□□□□□ -0.58
TCF4-231	ENST00000566279	CDC25A	P30304	524 aa		11.44	□□□□□ -0.58
TCF4-231	ENST00000566279	TXLNA	P40222	546 aa		11.44	□□□□□ -0.58
TCF4-231	ENST00000566279	CAP1	Q01518	475 aa		11.44	□□□□□ -0.58
TCF4-231	ENST00000566279	USP17L24	Q0WX57	530 aa		11.44	□□□□□ -0.58
TCF4-231	ENST00000566279	IK	Q13123	557 aa	Predicted RBP	11.44	□□□□□ -0.58
TCF4-231	ENST00000566279	ARID5B	Q14865	1188 aa		11.44	□□□□□ -0.58
TCF4-231	ENST00000566279	KARS	Q15046	597 aa	Known RBP	11.44	□□□□□ -0.58
TCF4-231	ENST00000566279	ANKRD13C	Q8N6S4	541 aa		11.44	□□□□□ -0.58
TCF4-231	ENST00000566279	ENOX1	Q8TC92	643 aa	Known RBP	11.44	□□□□□ -0.58
TCF4-231	ENST00000566279	TBCK	Q8TEA7	893 aa		11.44	□□□□□ -0.58
TCF4-231	ENST00000566279	KIFC2	Q96AC6	838 aa		11.44	□□□□□ -0.58
TCF4-231	ENST00000566279	ATG4C	Q96DT6	458 aa		11.44	□□□□□ -0.58
TCF4-231	ENST00000566279	GSDMA	Q96QA5	445 aa		11.44	□□□□□ -0.58
TCF4-231	ENST00000566279	MED15	Q96RN5	788 aa		11.44	□□□□□ -0.58
TCF4-231	ENST00000566279	PAGR1	Q9BTK6	254 aa		11.44	□□□□□ -0.58
TCF4-231	ENST00000566279	BEGAIN	Q9BUH8	593 aa		11.44	□□□□□ -0.58
TCF4-231	ENST00000566279		A0A0G2JMZ2	1700 aa		11.43	□□□□□ -0.58
TCF4-231	ENST00000566279	SPDYE16	A6NNV3	312 aa	Predicted RBP	11.43	□□□□□ -0.58
TCF4-231	ENST00000566279	ZBTB5	O15062	677 aa		11.43	□□□□□ -0.58
TCF4-231	ENST00000566279	CA12	O43570	354 aa		11.43	□□□□□ -0.58
TCF4-231	ENST00000566279	GTPBP6	O43824	516 aa	Predicted RBP	11.43	□□□□□ -0.58
TCF4-231	ENST00000566279	NEMF	O60524	1076 aa		11.43	□□□□□ -0.58
TCF4-231	ENST00000566279	CCNT1	O60563	726 aa	Known RBP	11.43	□□□□□ -0.58
TCF4-231	ENST00000566279	HOXA7	P31268	230 aa	Predicted RBP	11.43	□□□□□ -0.58
TCF4-231	ENST00000566279	HERVK_113	P62684	666 aa		11.43	□□□□□ -0.58
TCF4-231	ENST00000566279	FILIP1	Q7Z7B0	1213 aa		11.43	□□□□□ -0.58
TCF4-231	ENST00000566279	STAM	Q92783	540 aa		11.43	□□□□□ -0.58
TCF4-231	ENST00000566279	RIC8A	Q9NPQ8	531 aa		11.43	□□□□□ -0.58
TCF4-231	ENST00000566279	DISC1	Q9NRI5	854 aa		11.43	□□□□□ -0.58
TCF4-231	ENST00000566279	ADGRA2	Q96PE1	1338 aa		11.43	□□□□□ -0.58
TCF4-231	ENST00000566279	MYH7B	A7E2Y1	1941 aa		11.43	□□□□□ -0.58
TCF4-231	ENST00000566279	EDIL3	O43854	480 aa		11.42	□□□□□ -0.58
TCF4-231	ENST00000566279	ZNF18	P17022	549 aa		11.42	□□□□□ -0.58
TCF4-231	ENST00000566279	OSBP	P22059	807 aa		11.42	□□□□□ -0.58
TCF4-231	ENST00000566279	ERCC5	P28715	1186 aa	Predicted RBP	11.42	□□□□□ -0.58
TCF4-231	ENST00000566279	ORC2	Q13416	577 aa	Predicted RBP	11.42	□□□□□ -0.58
TCF4-231	ENST00000566279	NAALADL2	Q58DX5	795 aa		11.42	□□□□□ -0.58
TCF4-231	ENST00000566279	LRRC8A	Q8IWT6	810 aa		11.42	□□□□□ -0.58
TCF4-231	ENST00000566279	TRMT44	Q8IYL2	757 aa	Known RBP	11.42	□□□□□ -0.58
TCF4-231	ENST00000566279	GMCL1	Q96IK5	515 aa		11.42	□□□□□ -0.58
TCF4-231	ENST00000566279	NAP1L5	Q96NT1	182 aa	Predicted RBP	11.42	□□□□□ -0.58
TCF4-231	ENST00000566279	PARK7	Q99497	189 aa	Known RBP	11.42	□□□□□ -0.58
TCF4-231	ENST00000566279	CCSER1	Q9C0I3	900 aa		11.42	□□□□□ -0.58
TCF4-231	ENST00000566279	IMPACT	Q9P2X3	320 aa		11.42	□□□□□ -0.58
TCF4-231	ENST00000566279	TLR2	O60603	784 aa		11.42	□□□□□ -0.58
TCF4-231	ENST00000566279	CD44	P16070	742 aa	Known RBP	11.42	□□□□□ -0.58
TCF4-231	ENST00000566279	STAT6	P42226	847 aa		11.42	□□□□□ -0.58
TCF4-231	ENST00000566279	CLK2	P49760	499 aa	Known RBP	11.42	□□□□□ -0.58
TCF4-231	ENST00000566279	CUL4B	Q13620	913 aa		11.42	□□□□□ -0.58
TCF4-231	ENST00000566279	CT47A1	Q5JQC4	288 aa	Predicted RBP	11.42	□□□□□ -0.58
TCF4-231	ENST00000566279	REM2	Q8IYK8	340 aa	Predicted RBP	11.42	□□□□□ -0.58
TCF4-231	ENST00000566279	BLZF1	Q9H2G9	400 aa		11.42	□□□□□ -0.58
TCF4-231	ENST00000566279	ZFYVE28	Q9HCC9	887 aa		11.42	□□□□□ -0.58
TCF4-231	ENST00000566279	BTBD7	Q9P203	1132 aa		11.42	□□□□□ -0.58
TCF4-231	ENST00000566279	NFE2L3	Q9Y4A8	694 aa		11.42	□□□□□ -0.58
TCF4-231	ENST00000566279	ALDH1A1	P00352	501 aa		11.41	□□□□□ -0.58
TCF4-231	ENST00000566279	STAT2	P52630	851 aa		11.41	□□□□□ -0.58
TCF4-231	ENST00000566279	PABPC4	Q13310	644 aa	Known RBP eCLIP	11.41	□□□□□ -0.58
TCF4-231	ENST00000566279	COG2	Q14746	738 aa		11.41	□□□□□ -0.58
TCF4-231	ENST00000566279	UBE2S	Q16763	222 aa		11.41	□□□□□ -0.58
TCF4-231	ENST00000566279	QRICH1	Q2TAL8	776 aa		11.41	□□□□□ -0.58
TCF4-231	ENST00000566279		Q3C1V9	767 aa		11.41	□□□□□ -0.58
TCF4-231	ENST00000566279	TMC6	Q7Z403	805 aa		11.41	□□□□□ -0.58
TCF4-231	ENST00000566279	POTED	Q86YR6	584 aa		11.41	□□□□□ -0.58
TCF4-231	ENST00000566279	LRRC15	Q8TF66	581 aa		11.41	□□□□□ -0.58
TCF4-231	ENST00000566279	ARHGAP39	Q9C0H5	1083 aa		11.41	□□□□□ -0.58
TCF4-231	ENST00000566279	RBPJL	Q9UBG7	517 aa		11.41	□□□□□ -0.58
TCF4-231	ENST00000566279	PNMA3	Q9UL41	463 aa		11.41	□□□□□ -0.58
TCF4-231	ENST00000566279	PPP1R3G	B7ZBB8	358 aa		11.41	□□□□□ -0.58
TCF4-231	ENST00000566279	CBFA2T2	O43439	604 aa		11.41	□□□□□ -0.58
TCF4-231	ENST00000566279	CNMD	O75829	334 aa		11.41	□□□□□ -0.58
TCF4-231	ENST00000566279	SERPINC1	P01008	464 aa		11.41	□□□□□ -0.58
TCF4-231	ENST00000566279	CTGF	P29279	349 aa		11.41	□□□□□ -0.58
TCF4-231	ENST00000566279	DSG3	P32926	999 aa		11.41	□□□□□ -0.58
TCF4-231	ENST00000566279	UBA7	P41226	1012 aa		11.41	□□□□□ -0.58
TCF4-231	ENST00000566279	LBX1	P52954	281 aa		11.41	□□□□□ -0.58
TCF4-231	ENST00000566279	UBASH3A	P57075	661 aa		11.41	□□□□□ -0.58
TCF4-231	ENST00000566279	GSDMD	P57764	484 aa		11.41	□□□□□ -0.58
TCF4-231	ENST00000566279	CCZ1B	P86790	482 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms