RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 CREG2Q8IUH2 290 aa6.75□□□□□ -1.33
CNOT1-209ENST00000566240 CHAMP1Q96JM3 812 aa6.75□□□□□ -1.33
CNOT1-209ENST00000566240 CCDC136Q96JN2 1154 aa6.75□□□□□ -1.33
CNOT1-209ENST00000566240 C8orf48Q96LL4 319 aa6.75□□□□□ -1.33
CNOT1-209ENST00000566240 SLC52A1Q9NWF4 448 aa6.75□□□□□ -1.33
CNOT1-209ENST00000566240 THG1LQ9NWX6 298 aaKnown RBP6.75□□□□□ -1.33
CNOT1-209ENST00000566240 TRHDEQ9UKU6 1024 aa6.75□□□□□ -1.33
CNOT1-209ENST00000566240 SHTN1A0MZ66 631 aa6.74□□□□□ -1.33
CNOT1-209ENST00000566240 TMEM82A0PJX8 343 aa6.74□□□□□ -1.33
CNOT1-209ENST00000566240 PTPDC1A2A3K4 754 aa6.74□□□□□ -1.33
CNOT1-209ENST00000566240 C7orf72A4D263 438 aa6.74□□□□□ -1.33
CNOT1-209ENST00000566240 ATP2A2P16615 1042 aaKnown RBP6.74□□□□□ -1.33
CNOT1-209ENST00000566240 RPL10P27635 214 aaKnown RBP6.74□□□□□ -1.33
CNOT1-209ENST00000566240 GTF2A2P52657 109 aa6.74□□□□□ -1.33
CNOT1-209ENST00000566240 RPL11P62913 178 aaKnown RBP6.74□□□□□ -1.33
CNOT1-209ENST00000566240 OCRLQ01968 901 aa6.74□□□□□ -1.33
CNOT1-209ENST00000566240 ATP13A4Q4VNC1 1196 aa6.74□□□□□ -1.33
CNOT1-209ENST00000566240 IQSEC1Q6DN90 963 aa6.74□□□□□ -1.33
CNOT1-209ENST00000566240 CYP2R1Q6VVX0 501 aa6.74□□□□□ -1.33
CNOT1-209ENST00000566240 WDR75Q8IWA0 830 aaKnown RBP6.74□□□□□ -1.33
CNOT1-209ENST00000566240 SHKBP1Q8TBC3 707 aa6.74□□□□□ -1.33
CNOT1-209ENST00000566240 PANK1Q8TE04 598 aa6.74□□□□□ -1.33
CNOT1-209ENST00000566240 CHTF18Q8WVB6 975 aa6.74□□□□□ -1.33
CNOT1-209ENST00000566240 YIPF4Q9BSR8 244 aa6.74□□□□□ -1.33
CNOT1-209ENST00000566240 ZFP64Q9NPA5 681 aa6.74□□□□□ -1.33
CNOT1-209ENST00000566240 CATSPERZQ9NTU4 200 aa6.74□□□□□ -1.33
CNOT1-209ENST00000566240 PPARGC1AQ9UBK2 798 aaKnown RBP6.74□□□□□ -1.33
CNOT1-209ENST00000566240 SPEF1Q9Y4P9 236 aa6.74□□□□□ -1.33
CNOT1-209ENST00000566240 SNX11Q9Y5W9 270 aa6.74□□□□□ -1.33
CNOT1-209ENST00000566240 TMEM265A0A087WTH1 108 aa6.73□□□□□ -1.33
CNOT1-209ENST00000566240 GABRDO14764 452 aa6.73□□□□□ -1.33
CNOT1-209ENST00000566240 AKAP10O43572 662 aa6.73□□□□□ -1.33
CNOT1-209ENST00000566240 NPHS1O60500 1241 aa6.73□□□□□ -1.33
CNOT1-209ENST00000566240 PRKD3O94806 890 aa6.73□□□□□ -1.33
CNOT1-209ENST00000566240 BCL6P41182 706 aa6.73□□□□□ -1.33
CNOT1-209ENST00000566240 KPNA1P52294 538 aaPredicted RBP6.73□□□□□ -1.33
CNOT1-209ENST00000566240 TEKQ02763 1124 aa6.73□□□□□ -1.33
CNOT1-209ENST00000566240 EGR3Q06889 387 aa6.73□□□□□ -1.33
CNOT1-209ENST00000566240 LRRC41Q15345 812 aa6.73□□□□□ -1.33
CNOT1-209ENST00000566240 CRY1Q16526 586 aa6.73□□□□□ -1.33
CNOT1-209ENST00000566240 CPSF6Q16630 551 aaKnown RBP eCLIP6.73□□□□□ -1.33
CNOT1-209ENST00000566240 IFI16Q16666 785 aaKnown RBP6.73□□□□□ -1.33
CNOT1-209ENST00000566240 ARHGAP44Q17R89 818 aa6.73□□□□□ -1.33
CNOT1-209ENST00000566240 WAPLQ7Z5K2 1190 aa6.73□□□□□ -1.33
CNOT1-209ENST00000566240 C11orf74Q86VG3 221 aa6.73□□□□□ -1.33
CNOT1-209ENST00000566240 PASD1Q8IV76 773 aa6.73□□□□□ -1.33
CNOT1-209ENST00000566240 PLD6Q8N2A8 252 aaKnown RBP6.73□□□□□ -1.33
CNOT1-209ENST00000566240 CISD2Q8N5K1 135 aaKnown RBP6.73□□□□□ -1.33
CNOT1-209ENST00000566240 C2orf69Q8N8R5 385 aa6.73□□□□□ -1.33
CNOT1-209ENST00000566240 TMEM52Q8NDY8 209 aa6.73□□□□□ -1.33
CNOT1-209ENST00000566240 NETO1Q8TDF5 533 aa6.73□□□□□ -1.33
CNOT1-209ENST00000566240 CHMP4CQ96CF2 233 aa6.73□□□□□ -1.33
CNOT1-209ENST00000566240 KCNJ15Q99712 375 aa6.73□□□□□ -1.33
CNOT1-209ENST00000566240 CDIP1Q9H305 208 aa6.73□□□□□ -1.33
CNOT1-209ENST00000566240 ATP13A1Q9HD20 1204 aa6.73□□□□□ -1.33
CNOT1-209ENST00000566240 EMC7Q9NPA0 242 aa6.73□□□□□ -1.33
CNOT1-209ENST00000566240 SPTLC3Q9NUV7 552 aa6.73□□□□□ -1.33
CNOT1-209ENST00000566240 ERVK13-1Q9NX77 482 aa6.73□□□□□ -1.33
CNOT1-209ENST00000566240 GABBR1Q9UBS5 961 aa6.73□□□□□ -1.33
CNOT1-209ENST00000566240 FBXL7Q9UJT9 491 aa6.73□□□□□ -1.33
CNOT1-209ENST00000566240 CBLCQ9ULV8 474 aa6.73□□□□□ -1.33
CNOT1-209ENST00000566240 PITPNM2Q9BZ72 1349 aa6.73□□□□□ -1.33
CNOT1-209ENST00000566240 GSC2O15499 205 aa6.72□□□□□ -1.33
CNOT1-209ENST00000566240 IGLV1-40P01703 118 aa6.72□□□□□ -1.33
CNOT1-209ENST00000566240 ESR1P03372 595 aa6.72□□□□□ -1.33
CNOT1-209ENST00000566240 LACTBP83111 547 aaPredicted RBP6.72□□□□□ -1.33
CNOT1-209ENST00000566240 FAPQ12884 760 aa6.72□□□□□ -1.33
CNOT1-209ENST00000566240 HLA-DQA1Q5Y7H0 255 aa6.72□□□□□ -1.33
CNOT1-209ENST00000566240 ZBTB46Q86UZ6 589 aa6.72□□□□□ -1.33
CNOT1-209ENST00000566240 DPF3Q92784 378 aa6.72□□□□□ -1.33
CNOT1-209ENST00000566240 KRTAP4-12Q9BQ66 201 aa6.72□□□□□ -1.33
CNOT1-209ENST00000566240 MENTQ9BUN1 341 aa6.72□□□□□ -1.33
CNOT1-209ENST00000566240 AASDHPPTQ9NRN7 309 aa6.72□□□□□ -1.33
CNOT1-209ENST00000566240 CLDND1Q9NY35 253 aa6.72□□□□□ -1.33
CNOT1-209ENST00000566240 ZIM2Q9NZV7 527 aa6.72□□□□□ -1.33
CNOT1-209ENST00000566240 ZNF281Q9Y2X9 895 aa6.72□□□□□ -1.33
CNOT1-209ENST00000566240 TNKSO95271 1327 aa6.72□□□□□ -1.33
CNOT1-209ENST00000566240 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.71□□□□□ -1.34
CNOT1-209ENST00000566240 CCDC194A0A1B0GVG4 234 aa6.71□□□□□ -1.34
CNOT1-209ENST00000566240 CYP26A1O43174 497 aa6.71□□□□□ -1.34
CNOT1-209ENST00000566240 ULK1O75385 1050 aa6.71□□□□□ -1.34
CNOT1-209ENST00000566240 FBXO21O94952 628 aa6.71□□□□□ -1.34
CNOT1-209ENST00000566240 MAP4K4O95819 1239 aaPredicted RBP6.71□□□□□ -1.34
CNOT1-209ENST00000566240 SCGB1D2O95969 90 aa6.71□□□□□ -1.34
CNOT1-209ENST00000566240 TBX4P57082 545 aa6.71□□□□□ -1.34
CNOT1-209ENST00000566240 CEP68Q76N32 757 aa6.71□□□□□ -1.34
CNOT1-209ENST00000566240 OTOP1Q7RTM1 612 aa6.71□□□□□ -1.34
CNOT1-209ENST00000566240 CHPFQ8IZ52 775 aa6.71□□□□□ -1.34
CNOT1-209ENST00000566240 HOOK2Q96ED9 719 aa6.71□□□□□ -1.34
CNOT1-209ENST00000566240 TMEM169Q96HH4 297 aa6.71□□□□□ -1.34
CNOT1-209ENST00000566240 FCRL2Q96LA5 508 aaPredicted RBP6.71□□□□□ -1.34
CNOT1-209ENST00000566240 JAM3Q9BX67 310 aa6.71□□□□□ -1.34
CNOT1-209ENST00000566240 OXSMQ9NWU1 459 aa6.71□□□□□ -1.34
CNOT1-209ENST00000566240 BTG4Q9NY30 223 aa6.71□□□□□ -1.34
CNOT1-209ENST00000566240 ARID4BQ4LE39 1312 aaPredicted RBP6.71□□□□□ -1.34
CNOT1-209ENST00000566240 E2F8A0AVK6 867 aa6.7□□□□□ -1.34
CNOT1-209ENST00000566240 WTIPA6NIX2 430 aaPredicted RBP6.7□□□□□ -1.34
CNOT1-209ENST00000566240 H7BY64 318 aa6.7□□□□□ -1.34
CNOT1-209ENST00000566240 K7ESF4 209 aa6.7□□□□□ -1.34
CNOT1-209ENST00000566240 PRC1O43663 620 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms