RNA–Protein interactions for RNA: ENST00000566230.5

COMMD4-214, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-214ENST00000566230 ARIH1Q9Y4X5 557 aaPredicted RBP15.7■□□□□ 0.1
COMMD4-214ENST00000566230 A0A0D9SFI3 127 aa15.69■□□□□ 0.1
COMMD4-214ENST00000566230 B4DLN1 442 aa15.69■□□□□ 0.1
COMMD4-214ENST00000566230 NBNO60934 754 aa15.69■□□□□ 0.1
COMMD4-214ENST00000566230 CXCL10P02778 98 aa15.69■□□□□ 0.1
COMMD4-214ENST00000566230 GOLGA8HP0CJ92 632 aa15.69■□□□□ 0.1
COMMD4-214ENST00000566230 MRPL12P52815 198 aaKnown RBP15.69■□□□□ 0.1
COMMD4-214ENST00000566230 PDE1AP54750 535 aa15.69■□□□□ 0.1
COMMD4-214ENST00000566230 HAND2P61296 217 aa15.69■□□□□ 0.1
COMMD4-214ENST00000566230 RBL2Q08999 1139 aa15.69■□□□□ 0.1
COMMD4-214ENST00000566230 USH1GQ495M9 461 aa15.69■□□□□ 0.1
COMMD4-214ENST00000566230 TMEM31Q5JXX7 168 aa15.69■□□□□ 0.1
COMMD4-214ENST00000566230 SEPT14Q6ZU15 432 aa15.69■□□□□ 0.1
COMMD4-214ENST00000566230 LRRC8DQ7L1W4 858 aa15.69■□□□□ 0.1
COMMD4-214ENST00000566230 TICAM2Q86XR7 235 aa15.69■□□□□ 0.1
COMMD4-214ENST00000566230 CCDC155Q8N6L0 562 aa15.69■□□□□ 0.1
COMMD4-214ENST00000566230 EVI5LQ96CN4 794 aa15.69■□□□□ 0.1
COMMD4-214ENST00000566230 TAAR1Q96RJ0 339 aa15.69■□□□□ 0.1
COMMD4-214ENST00000566230 LNPKQ9C0E8 428 aa15.69■□□□□ 0.1
COMMD4-214ENST00000566230 UBA5Q9GZZ9 404 aa15.69■□□□□ 0.1
COMMD4-214ENST00000566230 SUGCTQ9HAC7 445 aa15.69■□□□□ 0.1
COMMD4-214ENST00000566230 COL20A1Q9P218 1284 aa15.69■□□□□ 0.1
COMMD4-214ENST00000566230 GH1P01241 217 aa15.68■□□□□ 0.1
COMMD4-214ENST00000566230 CENPBP07199 599 aaPredicted RBP15.68■□□□□ 0.1
COMMD4-214ENST00000566230 HSPD1P10809 573 aaKnown RBP15.68■□□□□ 0.1
COMMD4-214ENST00000566230 CKBP12277 381 aa15.68■□□□□ 0.1
COMMD4-214ENST00000566230 CNKSR3Q6P9H4 555 aa15.68■□□□□ 0.1
COMMD4-214ENST00000566230 TRAF7Q6Q0C0 670 aa15.68■□□□□ 0.1
COMMD4-214ENST00000566230 CHST3Q7LGC8 479 aa15.68■□□□□ 0.1
COMMD4-214ENST00000566230 SYTL5Q8TDW5 730 aaPredicted RBP15.68■□□□□ 0.1
COMMD4-214ENST00000566230 ZBED2Q9BTP6 218 aa15.68■□□□□ 0.1
COMMD4-214ENST00000566230 HDAC6Q9UBN7 1215 aa15.68■□□□□ 0.1
COMMD4-214ENST00000566230 GPR37L1O60883 481 aa15.67■□□□□ 0.1
COMMD4-214ENST00000566230 GJB5O95377 273 aa15.67■□□□□ 0.1
COMMD4-214ENST00000566230 ERVK-21P61565 698 aa15.67■□□□□ 0.1
COMMD4-214ENST00000566230 TRIM71Q2Q1W2 868 aaKnown RBP15.67■□□□□ 0.1
COMMD4-214ENST00000566230 MCMDC2Q4G0Z9 681 aa15.67■□□□□ 0.1
COMMD4-214ENST00000566230 ZNF589Q86UQ0 364 aaPredicted RBP15.67■□□□□ 0.1
COMMD4-214ENST00000566230 TBC1D10CQ8IV04 446 aa15.67■□□□□ 0.1
COMMD4-214ENST00000566230 WNT8BQ93098 351 aa15.67■□□□□ 0.1
COMMD4-214ENST00000566230 RAD9AQ99638 391 aa15.67■□□□□ 0.1
COMMD4-214ENST00000566230 OSBPL3Q9H4L5 887 aa15.67■□□□□ 0.1
COMMD4-214ENST00000566230 GTF2IRD1Q9UHL9 959 aa15.67■□□□□ 0.1
COMMD4-214ENST00000566230 MTUS1Q9ULD2 1270 aa15.67■□□□□ 0.1
COMMD4-214ENST00000566230 ZMYM6O95789 1325 aa15.67■□□□□ 0.1
COMMD4-214ENST00000566230 MICAL3Q7RTP6 2002 aa15.67■□□□□ 0.1
COMMD4-214ENST00000566230 MYO7AQ13402 2215 aa15.66■□□□□ 0.1
COMMD4-214ENST00000566230 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.66■□□□□ 0.1
COMMD4-214ENST00000566230 ABHD14A-ACY1A0A1B0GW23 586 aa15.66■□□□□ 0.1
COMMD4-214ENST00000566230 LINC01553A4QN01 128 aa15.66■□□□□ 0.1
COMMD4-214ENST00000566230 FAM86C2PA6NEL3 165 aa15.66■□□□□ 0.1
COMMD4-214ENST00000566230 CASTP20810 708 aaKnown RBP15.66■□□□□ 0.1
COMMD4-214ENST00000566230 MBTPS1Q14703 1052 aa15.66■□□□□ 0.1
COMMD4-214ENST00000566230 GPATCH4Q5T3I0 446 aaKnown RBP15.66■□□□□ 0.1
COMMD4-214ENST00000566230 MFSD6Q6ZSS7 791 aa15.66■□□□□ 0.1
COMMD4-214ENST00000566230 NSUN6Q8TEA1 469 aaKnown RBP15.66■□□□□ 0.1
COMMD4-214ENST00000566230 TGS1Q96RS0 853 aaKnown RBP15.66■□□□□ 0.1
COMMD4-214ENST00000566230 ZKSCAN3Q9BRR0 538 aa15.66■□□□□ 0.1
COMMD4-214ENST00000566230 MAF1Q9H063 256 aa15.66■□□□□ 0.1
COMMD4-214ENST00000566230 DDX41Q9UJV9 622 aaKnown RBP15.66■□□□□ 0.1
COMMD4-214ENST00000566230 HCN4Q9Y3Q4 1203 aa15.66■□□□□ 0.1
COMMD4-214ENST00000566230 PI4K2BG5E9Z4 385 aa15.65■□□□□ 0.1
COMMD4-214ENST00000566230 HAS3O00219 553 aa15.65■□□□□ 0.1
COMMD4-214ENST00000566230 PARNO95453 639 aaKnown RBP15.65■□□□□ 0.1
COMMD4-214ENST00000566230 PSEN2P49810 448 aa15.65■□□□□ 0.1
COMMD4-214ENST00000566230 ZNF200P98182 395 aaPredicted RBP15.65■□□□□ 0.1
COMMD4-214ENST00000566230 NMIQ13287 307 aaPredicted RBP15.65■□□□□ 0.1
COMMD4-214ENST00000566230 STXBP2Q15833 593 aa15.65■□□□□ 0.1
COMMD4-214ENST00000566230 CDC37Q16543 378 aaPredicted RBP15.65■□□□□ 0.1
COMMD4-214ENST00000566230 DGKDQ16760 1214 aa15.65■□□□□ 0.1
COMMD4-214ENST00000566230 ZNF618Q5T7W0 954 aa15.65■□□□□ 0.1
COMMD4-214ENST00000566230 PLEKHM2Q8IWE5 1019 aa15.65■□□□□ 0.1
COMMD4-214ENST00000566230 ADGRF4Q8IZF3 695 aa15.65■□□□□ 0.1
COMMD4-214ENST00000566230 EMID1Q96A84 441 aaPredicted RBP15.65■□□□□ 0.1
COMMD4-214ENST00000566230 IWS1Q96ST2 819 aa15.65■□□□□ 0.1
COMMD4-214ENST00000566230 RMDN3Q96TC7 470 aa15.65■□□□□ 0.1
COMMD4-214ENST00000566230 ALG1Q9BT22 464 aa15.65■□□□□ 0.1
COMMD4-214ENST00000566230 UBE2ZQ9H832 354 aaPredicted RBP15.65■□□□□ 0.1
COMMD4-214ENST00000566230 ABCB11O95342 1321 aa15.65■□□□□ 0.1
COMMD4-214ENST00000566230 NEDD4P46934 1319 aa15.65■□□□□ 0.1
COMMD4-214ENST00000566230 PCP11498 1178 aaKnown RBP15.64■□□□□ 0.09
COMMD4-214ENST00000566230 PTK7Q13308 1070 aa15.64■□□□□ 0.09
COMMD4-214ENST00000566230 IKBKEQ14164 716 aa15.64■□□□□ 0.09
COMMD4-214ENST00000566230 HIC1Q14526 733 aa15.64■□□□□ 0.09
COMMD4-214ENST00000566230 MFSD10Q14728 455 aa15.64■□□□□ 0.09
COMMD4-214ENST00000566230 FAM117BQ6P1L5 589 aa15.64■□□□□ 0.09
COMMD4-214ENST00000566230 FAM178BQ8IXR5 827 aa15.64■□□□□ 0.09
COMMD4-214ENST00000566230 C7orf31Q8N865 590 aa15.64■□□□□ 0.09
COMMD4-214ENST00000566230 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.64■□□□□ 0.09
COMMD4-214ENST00000566230 EIF3JO75822 258 aaKnown RBP15.63■□□□□ 0.09
COMMD4-214ENST00000566230 F2P00734 622 aa15.63■□□□□ 0.09
COMMD4-214ENST00000566230 ZNF286BP0CG31 522 aa15.63■□□□□ 0.09
COMMD4-214ENST00000566230 MKRN4PQ13434 485 aaPredicted RBP15.63■□□□□ 0.09
COMMD4-214ENST00000566230 KIAA0753Q2KHM9 967 aa15.63■□□□□ 0.09
COMMD4-214ENST00000566230 LEXMQ3ZCV2 418 aa15.63■□□□□ 0.09
COMMD4-214ENST00000566230 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.63■□□□□ 0.09
COMMD4-214ENST00000566230 DGKHQ86XP1 1220 aa15.63■□□□□ 0.09
COMMD4-214ENST00000566230 PNMA1Q8ND90 353 aa15.63■□□□□ 0.09
COMMD4-214ENST00000566230 LAMA4Q16363 1823 aa15.63■□□□□ 0.09
COMMD4-214ENST00000566230 CCDC171Q6TFL3 1326 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms