RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 FGD1P98174 961 aa19.3■□□□□ 0.68
USB1-211ENST00000565662 PGM5Q15124 567 aa19.3■□□□□ 0.68
USB1-211ENST00000565662 PPP1R18Q6NYC8 613 aa19.3■□□□□ 0.68
USB1-211ENST00000565662 SEPT14Q6ZU15 432 aa19.3■□□□□ 0.68
USB1-211ENST00000565662 VSIG10LQ86VR7 867 aa19.3■□□□□ 0.68
USB1-211ENST00000565662 FANCBQ8NB91 859 aa19.3■□□□□ 0.68
USB1-211ENST00000565662 PPTC7Q8NI37 304 aa19.3■□□□□ 0.68
USB1-211ENST00000565662 SMARCC2Q8TAQ2 1214 aa19.3■□□□□ 0.68
USB1-211ENST00000565662 CDHR1Q96JP9 859 aa19.3■□□□□ 0.68
USB1-211ENST00000565662 ALDH8A1Q9H2A2 487 aaPredicted RBP19.3■□□□□ 0.68
USB1-211ENST00000565662 PARNO95453 639 aaKnown RBP19.29■□□□□ 0.68
USB1-211ENST00000565662 APOA5Q6Q788 366 aa19.29■□□□□ 0.68
USB1-211ENST00000565662 SESTD1Q86VW0 696 aa19.29■□□□□ 0.68
USB1-211ENST00000565662 RPUSD2Q8IZ73 545 aaKnown RBP19.29■□□□□ 0.68
USB1-211ENST00000565662 DDX41Q9UJV9 622 aaKnown RBP19.29■□□□□ 0.68
USB1-211ENST00000565662 BAZ2BQ9UIF8 2168 aaKnown RBP19.29■□□□□ 0.68
USB1-211ENST00000565662 PITPNM1O00562 1244 aa19.28■□□□□ 0.68
USB1-211ENST00000565662 SOX1O00570 391 aaPredicted RBP19.28■□□□□ 0.68
USB1-211ENST00000565662 ZBTB43O43298 467 aa19.28■□□□□ 0.68
USB1-211ENST00000565662 MMP3P08254 477 aa19.28■□□□□ 0.68
USB1-211ENST00000565662 RFC2P35250 354 aa19.28■□□□□ 0.68
USB1-211ENST00000565662 ZNF697Q5TEC3 545 aa19.28■□□□□ 0.68
USB1-211ENST00000565662 TMTC3Q6ZXV5 915 aa19.28■□□□□ 0.68
USB1-211ENST00000565662 MICU3Q86XE3 530 aa19.28■□□□□ 0.68
USB1-211ENST00000565662 DHX37Q8IY37 1157 aaKnown RBP19.28■□□□□ 0.68
USB1-211ENST00000565662 GIMAP8Q8ND71 665 aaPredicted RBP19.28■□□□□ 0.68
USB1-211ENST00000565662 TBC1D5Q92609 795 aa19.28■□□□□ 0.68
USB1-211ENST00000565662 LRCH3Q96II8 777 aa19.28■□□□□ 0.68
USB1-211ENST00000565662 SENP2Q9HC62 589 aa19.28■□□□□ 0.68
USB1-211ENST00000565662 NOD1Q9Y239 953 aa19.28■□□□□ 0.68
USB1-211ENST00000565662 LAMA3Q16787 3333 aa19.27■□□□□ 0.68
USB1-211ENST00000565662 CENPBP07199 599 aaPredicted RBP19.27■□□□□ 0.68
USB1-211ENST00000565662 MYCLP12524 364 aaPredicted RBP19.27■□□□□ 0.68
USB1-211ENST00000565662 ARHGAP1Q07960 439 aa19.27■□□□□ 0.68
USB1-211ENST00000565662 BFSP2Q13515 415 aa19.27■□□□□ 0.68
USB1-211ENST00000565662 NEDD9Q14511 834 aa19.27■□□□□ 0.68
USB1-211ENST00000565662 SHHQ15465 462 aa19.27■□□□□ 0.68
USB1-211ENST00000565662 FBXL16Q8N461 479 aa19.27■□□□□ 0.68
USB1-211ENST00000565662 DEFB123Q8N688 67 aa19.27■□□□□ 0.68
USB1-211ENST00000565662 DDX49Q9Y6V7 483 aaKnown RBP19.27■□□□□ 0.68
USB1-211ENST00000565662 FIBPO43427 364 aa19.26■□□□□ 0.67
USB1-211ENST00000565662 B4GALT4O60513 344 aa19.26■□□□□ 0.67
USB1-211ENST00000565662 PPFIA4O75335 1185 aa19.26■□□□□ 0.67
USB1-211ENST00000565662 ARIH2O95376 493 aa19.26■□□□□ 0.67
USB1-211ENST00000565662 HOXA13P31271 388 aaPredicted RBP19.26■□□□□ 0.67
USB1-211ENST00000565662 ICAM3P32942 547 aa19.26■□□□□ 0.67
USB1-211ENST00000565662 IRX5P78411 483 aaPredicted RBP19.26■□□□□ 0.67
USB1-211ENST00000565662 RTN1Q16799 776 aa19.26■□□□□ 0.67
USB1-211ENST00000565662 LY6KQ17RY6 165 aa19.26■□□□□ 0.67
USB1-211ENST00000565662 PCNX4Q63HM2 1172 aa19.26■□□□□ 0.67
USB1-211ENST00000565662 MCTP2Q6DN12 878 aa19.26■□□□□ 0.67
USB1-211ENST00000565662 NLRX1Q86UT6 975 aa19.26■□□□□ 0.67
USB1-211ENST00000565662 FCHSD1Q86WN1 690 aa19.26■□□□□ 0.67
USB1-211ENST00000565662 CAGE1Q8TC20 777 aa19.26■□□□□ 0.67
USB1-211ENST00000565662 KCNB2Q92953 911 aa19.26■□□□□ 0.67
USB1-211ENST00000565662 MYL10Q9BUA6 226 aa19.26■□□□□ 0.67
USB1-211ENST00000565662 IL23AQ9NPF7 189 aa19.26■□□□□ 0.67
USB1-211ENST00000565662 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.25■□□□□ 0.67
USB1-211ENST00000565662 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.25■□□□□ 0.67
USB1-211ENST00000565662 SPDYE3A6NKU9 549 aa19.25■□□□□ 0.67
USB1-211ENST00000565662 HOXD8P13378 290 aaPredicted RBP19.25■□□□□ 0.67
USB1-211ENST00000565662 ITGB8P26012 769 aa19.25■□□□□ 0.67
USB1-211ENST00000565662 HSPA4P34932 840 aa19.25■□□□□ 0.67
USB1-211ENST00000565662 EXOSC10Q01780 885 aaKnown RBP19.25■□□□□ 0.67
USB1-211ENST00000565662 FAM47CQ5HY64 1035 aa19.25■□□□□ 0.67
USB1-211ENST00000565662 BLOC1S2Q6QNY1 142 aa19.25■□□□□ 0.67
USB1-211ENST00000565662 SRBD1Q8N5C6 995 aaKnown RBP19.25■□□□□ 0.67
USB1-211ENST00000565662 AFG1LQ8WV93 481 aa19.25■□□□□ 0.67
USB1-211ENST00000565662 INPP4AQ96PE3 977 aaPredicted RBP19.25■□□□□ 0.67
USB1-211ENST00000565662 SENP7Q9BQF6 1050 aa19.25■□□□□ 0.67
USB1-211ENST00000565662 NOC4LQ9BVI4 516 aaKnown RBP19.25■□□□□ 0.67
USB1-211ENST00000565662 PPP1R12CQ9BZL4 782 aa19.25■□□□□ 0.67
USB1-211ENST00000565662 PSTPIP2Q9H939 334 aa19.25■□□□□ 0.67
USB1-211ENST00000565662 GRIN2DO15399 1336 aa19.25■□□□□ 0.67
USB1-211ENST00000565662 TANC1Q9C0D5 1861 aa19.24■□□□□ 0.67
USB1-211ENST00000565662 NID2Q14112 1375 aa19.24■□□□□ 0.67
USB1-211ENST00000565662 MAFGO15525 162 aa19.24■□□□□ 0.67
USB1-211ENST00000565662 PLEKHA8P1O95397 391 aa19.24■□□□□ 0.67
USB1-211ENST00000565662 F2P00734 622 aa19.24■□□□□ 0.67
USB1-211ENST00000565662 PSMC6P62333 389 aa19.24■□□□□ 0.67
USB1-211ENST00000565662 SLC35G1Q2M3R5 365 aa19.24■□□□□ 0.67
USB1-211ENST00000565662 NBPF20Q3BBV1 942 aa19.24■□□□□ 0.67
USB1-211ENST00000565662 CELF3Q5SZQ8 465 aaKnown RBP19.24■□□□□ 0.67
USB1-211ENST00000565662 RETREG2Q8NC44 543 aa19.24■□□□□ 0.67
USB1-211ENST00000565662 CCDC12Q8WUD4 166 aaPredicted RBP19.24■□□□□ 0.67
USB1-211ENST00000565662 MLXIPQ9HAP2 919 aa19.24■□□□□ 0.67
USB1-211ENST00000565662 PPP4R2Q9NY27 417 aa19.24■□□□□ 0.67
USB1-211ENST00000565662 GOLGA8AA7E2F4 631 aa19.23■□□□□ 0.67
USB1-211ENST00000565662 GOLGA8BA8MQT2 603 aa19.23■□□□□ 0.67
USB1-211ENST00000565662 NOP56O00567 594 aaKnown RBP19.23■□□□□ 0.67
USB1-211ENST00000565662 FOSP01100 380 aaPredicted RBP19.23■□□□□ 0.67
USB1-211ENST00000565662 ACTN1P12814 892 aa19.23■□□□□ 0.67
USB1-211ENST00000565662 C9orf50Q5SZB4 431 aa19.23■□□□□ 0.67
USB1-211ENST00000565662 MYSM1Q5VVJ2 828 aa19.23■□□□□ 0.67
USB1-211ENST00000565662 METTL7BQ6UX53 244 aa19.23■□□□□ 0.67
USB1-211ENST00000565662 COPS5Q92905 334 aa19.23■□□□□ 0.67
USB1-211ENST00000565662 GPRASP2Q96D09 838 aa19.23■□□□□ 0.67
USB1-211ENST00000565662 SPATA33Q96N06 139 aa19.23■□□□□ 0.67
USB1-211ENST00000565662 MYH7BA7E2Y1 1941 aa19.23■□□□□ 0.67
USB1-211ENST00000565662 CNTNAP5Q8WYK1 1306 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms