RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, humanhuman

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-215ENST00000565559 ZXDAP98168 799 aa13.27□□□□□ -0.29
CAPN3-215ENST00000565559 SMAD4Q13485 552 aaKnown RBP13.27□□□□□ -0.29
CAPN3-215ENST00000565559 ADAM33Q9BZ11 813 aa13.27□□□□□ -0.29
CAPN3-215ENST00000565559 ISY1Q9ULR0 285 aaKnown RBP13.27□□□□□ -0.29
CAPN3-215ENST00000565559 SIP14410 1827 aa13.27□□□□□ -0.29
CAPN3-215ENST00000565559 MYH8P13535 1937 aa13.27□□□□□ -0.29
CAPN3-215ENST00000565559 TRIOO75962 3097 aa13.26□□□□□ -0.29
CAPN3-215ENST00000565559 PSEN2P49810 448 aa13.26□□□□□ -0.29
CAPN3-215ENST00000565559 ZKSCAN2Q63HK3 967 aa13.26□□□□□ -0.29
CAPN3-215ENST00000565559 PPP1R13LQ8WUF5 828 aa13.26□□□□□ -0.29
CAPN3-215ENST00000565559 EAF2Q96CJ1 260 aaPredicted RBP13.26□□□□□ -0.29
CAPN3-215ENST00000565559 TRERF1Q96PN7 1200 aa13.26□□□□□ -0.29
CAPN3-215ENST00000565559 FSD1Q9BTV5 496 aa13.26□□□□□ -0.29
CAPN3-215ENST00000565559 DDX49Q9Y6V7 483 aaKnown RBP13.26□□□□□ -0.29
CAPN3-215ENST00000565559 C5orf42Q9H799 3197 aa13.26□□□□□ -0.29
CAPN3-215ENST00000565559 RIF1Q5UIP0 2472 aaKnown RBP13.25□□□□□ -0.29
CAPN3-215ENST00000565559 H0Y858 1186 aa13.25□□□□□ -0.29
CAPN3-215ENST00000565559 NKRFO15226 690 aaKnown RBP eCLIP13.25□□□□□ -0.29
CAPN3-215ENST00000565559 PRKAB2O43741 272 aa13.25□□□□□ -0.29
CAPN3-215ENST00000565559 NBNO60934 754 aa13.25□□□□□ -0.29
CAPN3-215ENST00000565559 KDM4AO75164 1064 aa13.25□□□□□ -0.29
CAPN3-215ENST00000565559 MBD4O95243 580 aa13.25□□□□□ -0.29
CAPN3-215ENST00000565559 ALAS1P13196 640 aa13.25□□□□□ -0.29
CAPN3-215ENST00000565559 AVPR2P30518 371 aa13.25□□□□□ -0.29
CAPN3-215ENST00000565559 SIGLEC14Q08ET2 396 aa13.25□□□□□ -0.29
CAPN3-215ENST00000565559 IKQ13123 557 aaPredicted RBP13.25□□□□□ -0.29
CAPN3-215ENST00000565559 NBR1Q14596 966 aa13.25□□□□□ -0.29
CAPN3-215ENST00000565559 PPP2R5BQ15173 497 aa13.25□□□□□ -0.29
CAPN3-215ENST00000565559 ASCL5Q7RTU5 278 aa13.25□□□□□ -0.29
CAPN3-215ENST00000565559 RPAP2Q8IXW5 612 aaPredicted RBP13.25□□□□□ -0.29
CAPN3-215ENST00000565559 MYOCDQ8IZQ8 938 aa13.25□□□□□ -0.29
CAPN3-215ENST00000565559 FRAT1Q92837 279 aaPredicted RBP13.25□□□□□ -0.29
CAPN3-215ENST00000565559 TLR9Q9NR96 1032 aa13.25□□□□□ -0.29
CAPN3-215ENST00000565559 CYP39A1Q9NYL5 469 aa13.25□□□□□ -0.29
CAPN3-215ENST00000565559 CLIP2Q9UDT6 1046 aa13.25□□□□□ -0.29
CAPN3-215ENST00000565559 ADD3Q9UEY8 706 aaKnown RBP13.25□□□□□ -0.29
CAPN3-215ENST00000565559 RCAN3Q9UKA8 241 aa13.25□□□□□ -0.29
CAPN3-215ENST00000565559 PRR23AA6NEV1 266 aa13.24□□□□□ -0.29
CAPN3-215ENST00000565559 TRIM27P14373 513 aa13.24□□□□□ -0.29
CAPN3-215ENST00000565559 LTBRP36941 435 aa13.24□□□□□ -0.29
CAPN3-215ENST00000565559 STAT2P52630 851 aa13.24□□□□□ -0.29
CAPN3-215ENST00000565559 VCPP55072 806 aaKnown RBP13.24□□□□□ -0.29
CAPN3-215ENST00000565559 HTRA4P83105 476 aaPredicted RBP13.24□□□□□ -0.29
CAPN3-215ENST00000565559 GPNMBQ14956 572 aa13.24□□□□□ -0.29
CAPN3-215ENST00000565559 TYW1BQ6NUM6 668 aa13.24□□□□□ -0.29
CAPN3-215ENST00000565559 NSMFQ6X4W1 530 aa13.24□□□□□ -0.29
CAPN3-215ENST00000565559 FBXO11Q86XK2 927 aa13.24□□□□□ -0.29
CAPN3-215ENST00000565559 TMEM192Q8IY95 271 aa13.24□□□□□ -0.29
CAPN3-215ENST00000565559 MORC4Q8TE76 937 aa13.24□□□□□ -0.29
CAPN3-215ENST00000565559 SSH3Q8TE77 659 aa13.24□□□□□ -0.29
CAPN3-215ENST00000565559 YME1L1Q96TA2 773 aa13.24□□□□□ -0.29
CAPN3-215ENST00000565559 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.24□□□□□ -0.29
CAPN3-215ENST00000565559 MKNK2Q9HBH9 465 aa13.24□□□□□ -0.29
CAPN3-215ENST00000565559 CD207Q9UJ71 328 aa13.24□□□□□ -0.29
CAPN3-215ENST00000565559 SYNPO2Q9UMS6 1093 aa13.24□□□□□ -0.29
CAPN3-215ENST00000565559 CACNA1BQ00975 2339 aa13.24□□□□□ -0.29
CAPN3-215ENST00000565559 TET1Q8NFU7 2136 aa13.24□□□□□ -0.29
CAPN3-215ENST00000565559 LOC102724159A0A0B4J2E5 919 aa13.23□□□□□ -0.29
CAPN3-215ENST00000565559 TCRBV5S4A2TA0A5A2 114 aa13.23□□□□□ -0.29
CAPN3-215ENST00000565559 A6NJR5 290 aa13.23□□□□□ -0.29
CAPN3-215ENST00000565559 CKBP12277 381 aa13.23□□□□□ -0.29
CAPN3-215ENST00000565559 BMP3P12645 472 aa13.23□□□□□ -0.29
CAPN3-215ENST00000565559 RBL2Q08999 1139 aa13.23□□□□□ -0.29
CAPN3-215ENST00000565559 PWP2Q15269 919 aaKnown RBP13.23□□□□□ -0.29
CAPN3-215ENST00000565559 CTC1Q2NKJ3 1217 aa13.23□□□□□ -0.29
CAPN3-215ENST00000565559 AACSQ86V21 672 aa13.23□□□□□ -0.29
CAPN3-215ENST00000565559 LRRC47Q8N1G4 583 aaKnown RBP13.23□□□□□ -0.29
CAPN3-215ENST00000565559 CHURC1Q8WUH1 139 aa13.23□□□□□ -0.29
CAPN3-215ENST00000565559 KCNK17Q96T54 332 aa13.23□□□□□ -0.29
CAPN3-215ENST00000565559 MPHOSPH6Q99547 160 aaKnown RBP13.23□□□□□ -0.29
CAPN3-215ENST00000565559 ALG13Q9NP73 1137 aaKnown RBP13.23□□□□□ -0.29
CAPN3-215ENST00000565559 ARPP21Q9UBL0 812 aaPredicted RBP13.23□□□□□ -0.29
CAPN3-215ENST00000565559 PTPRSQ13332 1948 aa13.23□□□□□ -0.29
CAPN3-215ENST00000565559 FAM186AA6NE01 2351 aa13.22□□□□□ -0.29
CAPN3-215ENST00000565559 EMSYQ7Z589 1322 aa13.22□□□□□ -0.29
CAPN3-215ENST00000565559 RBM47A0AV96 593 aaKnown RBP13.22□□□□□ -0.29
CAPN3-215ENST00000565559 TMEM232C9JQI7 657 aa13.22□□□□□ -0.29
CAPN3-215ENST00000565559 GOLIM4O00461 696 aa13.22□□□□□ -0.29
CAPN3-215ENST00000565559 ARHGAP33O14559 1287 aa13.22□□□□□ -0.29
CAPN3-215ENST00000565559 LGR5O75473 907 aa13.22□□□□□ -0.29
CAPN3-215ENST00000565559 MS4A1P11836 297 aa13.22□□□□□ -0.29
CAPN3-215ENST00000565559 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.22□□□□□ -0.29
CAPN3-215ENST00000565559 FAM160B2Q86V87 743 aa13.22□□□□□ -0.29
CAPN3-215ENST00000565559 SESTD1Q86VW0 696 aa13.22□□□□□ -0.29
CAPN3-215ENST00000565559 GMCL1P1Q8NEA9 526 aa13.22□□□□□ -0.29
CAPN3-215ENST00000565559 DNAJC2Q99543 621 aaKnown RBP13.22□□□□□ -0.29
CAPN3-215ENST00000565559 EPAS1Q99814 870 aa13.22□□□□□ -0.29
CAPN3-215ENST00000565559 NOP58Q9Y2X3 529 aaKnown RBP13.22□□□□□ -0.29
CAPN3-215ENST00000565559 SCN10AQ9Y5Y9 1956 aa13.21□□□□□ -0.29
CAPN3-215ENST00000565559 NBL1P41271 181 aa13.21□□□□□ -0.29
CAPN3-215ENST00000565559 ALDH5A1P51649 535 aaPredicted RBP13.21□□□□□ -0.29
CAPN3-215ENST00000565559 ATP8B2P98198 1209 aa13.21□□□□□ -0.29
CAPN3-215ENST00000565559 DLX2Q07687 328 aaPredicted RBP13.21□□□□□ -0.29
CAPN3-215ENST00000565559 HYAL1Q12794 435 aa13.21□□□□□ -0.29
CAPN3-215ENST00000565559 TCTN1Q2MV58 587 aa13.21□□□□□ -0.29
CAPN3-215ENST00000565559 SLFN13Q68D06 897 aa13.21□□□□□ -0.29
CAPN3-215ENST00000565559 MCTP2Q6DN12 878 aa13.21□□□□□ -0.29
CAPN3-215ENST00000565559 GDF6Q6KF10 455 aaPredicted RBP13.21□□□□□ -0.29
CAPN3-215ENST00000565559 CTR9Q6PD62 1173 aa13.21□□□□□ -0.29
CAPN3-215ENST00000565559 SCFD2Q8WU76 684 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms