RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 ADD2P35612 726 aa10.74□□□□□ -0.69
VPS9D1-205ENST00000565452 BMPR1AP36894 532 aa10.74□□□□□ -0.69
VPS9D1-205ENST00000565452 SLC1A4P43007 532 aa10.74□□□□□ -0.69
VPS9D1-205ENST00000565452 SBK1Q52WX2 424 aa10.74□□□□□ -0.69
VPS9D1-205ENST00000565452 DGLUCYQ7Z3D6 616 aa10.74□□□□□ -0.69
VPS9D1-205ENST00000565452 STK11IPQ8N1F8 1099 aa10.74□□□□□ -0.69
VPS9D1-205ENST00000565452 COPS5Q92905 334 aa10.74□□□□□ -0.69
VPS9D1-205ENST00000565452 IL17RAQ96F46 866 aa10.74□□□□□ -0.69
VPS9D1-205ENST00000565452 GMCL1Q96IK5 515 aa10.74□□□□□ -0.69
VPS9D1-205ENST00000565452 RPGRIP1Q96KN7 1286 aa10.74□□□□□ -0.69
VPS9D1-205ENST00000565452 PHF7Q9BWX1 381 aaPredicted RBP10.74□□□□□ -0.69
VPS9D1-205ENST00000565452 GTF2IRD1Q9UHL9 959 aa10.74□□□□□ -0.69
VPS9D1-205ENST00000565452 CCPG1Q9ULG6 757 aa10.74□□□□□ -0.69
VPS9D1-205ENST00000565452 CACNA1BQ00975 2339 aa10.74□□□□□ -0.69
VPS9D1-205ENST00000565452 MINDY4BA8MYZ0 360 aa10.73□□□□□ -0.69
VPS9D1-205ENST00000565452 RSPH10B2B2RC85 870 aa10.73□□□□□ -0.69
VPS9D1-205ENST00000565452 C5orf67F2Z3F1 127 aa10.73□□□□□ -0.69
VPS9D1-205ENST00000565452 GRM6O15303 877 aa10.73□□□□□ -0.69
VPS9D1-205ENST00000565452 TBX10O75333 385 aa10.73□□□□□ -0.69
VPS9D1-205ENST00000565452 RSPH10BP0C881 870 aa10.73□□□□□ -0.69
VPS9D1-205ENST00000565452 MCCP23508 829 aa10.73□□□□□ -0.69
VPS9D1-205ENST00000565452 ICAM3P32942 547 aa10.73□□□□□ -0.69
VPS9D1-205ENST00000565452 CTNNB1P35222 781 aa10.73□□□□□ -0.69
VPS9D1-205ENST00000565452 RARSP54136 660 aaKnown RBP10.73□□□□□ -0.69
VPS9D1-205ENST00000565452 RRP1P56182 461 aaKnown RBP10.73□□□□□ -0.69
VPS9D1-205ENST00000565452 RCSD1Q6JBY9 416 aa10.73□□□□□ -0.69
VPS9D1-205ENST00000565452 AFG1LQ8WV93 481 aa10.73□□□□□ -0.69
VPS9D1-205ENST00000565452 SEPT8Q92599 483 aa10.73□□□□□ -0.69
VPS9D1-205ENST00000565452 CEP95Q96GE4 821 aa10.73□□□□□ -0.69
VPS9D1-205ENST00000565452 MSLNLQ96KJ4 702 aa10.73□□□□□ -0.69
VPS9D1-205ENST00000565452 HDAC6Q9UBN7 1215 aa10.73□□□□□ -0.69
VPS9D1-205ENST00000565452 MCM3APO60318 1980 aa10.73□□□□□ -0.69
VPS9D1-205ENST00000565452 PTPDC1A2A3K4 754 aa10.72□□□□□ -0.69
VPS9D1-205ENST00000565452 LINC01565O15544 149 aa10.72□□□□□ -0.69
VPS9D1-205ENST00000565452 ICAM1P05362 532 aa10.72□□□□□ -0.69
VPS9D1-205ENST00000565452 GTF2F1P35269 517 aaKnown RBP eCLIP10.72□□□□□ -0.69
VPS9D1-205ENST00000565452 SNAP25P60880 206 aa10.72□□□□□ -0.69
VPS9D1-205ENST00000565452 COASYQ13057 564 aa10.72□□□□□ -0.69
VPS9D1-205ENST00000565452 MBTPS1Q14703 1052 aa10.72□□□□□ -0.69
VPS9D1-205ENST00000565452 UBE3CQ15386 1083 aa10.72□□□□□ -0.69
VPS9D1-205ENST00000565452 DGKDQ16760 1214 aa10.72□□□□□ -0.69
VPS9D1-205ENST00000565452 PLEKHG4Q58EX7 1191 aa10.72□□□□□ -0.69
VPS9D1-205ENST00000565452 PPP4R3BQ5MIZ7 849 aa10.72□□□□□ -0.69
VPS9D1-205ENST00000565452 ZSCAN25Q6NSZ9 544 aa10.72□□□□□ -0.69
VPS9D1-205ENST00000565452 GIMAP6Q6P9H5 292 aa10.72□□□□□ -0.69
VPS9D1-205ENST00000565452 ZBTB33Q86T24 672 aa10.72□□□□□ -0.69
VPS9D1-205ENST00000565452 KAT2BQ92831 832 aa10.72□□□□□ -0.69
VPS9D1-205ENST00000565452 KATNAL1Q9BW62 490 aa10.72□□□□□ -0.69
VPS9D1-205ENST00000565452 IFIH1Q9BYX4 1025 aaKnown RBP10.72□□□□□ -0.69
VPS9D1-205ENST00000565452 PRR12Q9ULL5 1215 aa10.72□□□□□ -0.69
VPS9D1-205ENST00000565452 MED19A0JLT2 244 aaPredicted RBP10.71□□□□□ -0.69
VPS9D1-205ENST00000565452 GH1P01241 217 aa10.71□□□□□ -0.69
VPS9D1-205ENST00000565452 CALML3P27482 149 aa10.71□□□□□ -0.69
VPS9D1-205ENST00000565452 THPOP40225 353 aa10.71□□□□□ -0.69
VPS9D1-205ENST00000565452 PSEN2P49810 448 aa10.71□□□□□ -0.69
VPS9D1-205ENST00000565452 COL4A4P53420 1690 aaPredicted RBP10.71□□□□□ -0.69
VPS9D1-205ENST00000565452 PTPN21Q16825 1174 aa10.71□□□□□ -0.69
VPS9D1-205ENST00000565452 TRIM71Q2Q1W2 868 aaKnown RBP10.71□□□□□ -0.69
VPS9D1-205ENST00000565452 PARP14Q460N5 1801 aa10.71□□□□□ -0.69
VPS9D1-205ENST00000565452 SLFNL1Q499Z3 407 aa10.71□□□□□ -0.69
VPS9D1-205ENST00000565452 HSP90AB4PQ58FF6 505 aa10.71□□□□□ -0.69
VPS9D1-205ENST00000565452 TRAF7Q6Q0C0 670 aa10.71□□□□□ -0.69
VPS9D1-205ENST00000565452 FRMD5Q7Z6J6 570 aa10.71□□□□□ -0.69
VPS9D1-205ENST00000565452 EFHBQ8N7U6 833 aa10.71□□□□□ -0.69
VPS9D1-205ENST00000565452 SMRP1Q8NCR6 262 aa10.71□□□□□ -0.69
VPS9D1-205ENST00000565452 DNERQ8NFT8 737 aa10.71□□□□□ -0.69
VPS9D1-205ENST00000565452 ALG1Q9BT22 464 aa10.71□□□□□ -0.69
VPS9D1-205ENST00000565452 PLVAPQ9BX97 442 aa10.71□□□□□ -0.69
VPS9D1-205ENST00000565452 INCENPQ9NQS7 918 aa10.71□□□□□ -0.69
VPS9D1-205ENST00000565452 PAG1Q9NWQ8 432 aa10.71□□□□□ -0.69
VPS9D1-205ENST00000565452 PNMA2Q9UL42 364 aa10.71□□□□□ -0.69
VPS9D1-205ENST00000565452 MMP3P08254 477 aa10.7□□□□□ -0.7
VPS9D1-205ENST00000565452 IFIT2P09913 472 aaKnown RBP10.7□□□□□ -0.7
VPS9D1-205ENST00000565452 TSPY3P0CV98 308 aa10.7□□□□□ -0.7
VPS9D1-205ENST00000565452 TSPY8P0CW00 308 aa10.7□□□□□ -0.7
VPS9D1-205ENST00000565452 TRIM27P14373 513 aa10.7□□□□□ -0.7
VPS9D1-205ENST00000565452 ATF7P17544 494 aaPredicted RBP10.7□□□□□ -0.7
VPS9D1-205ENST00000565452 PUM1Q14671 1186 aaKnown RBP eCLIP10.7□□□□□ -0.7
VPS9D1-205ENST00000565452 KIAA0753Q2KHM9 967 aa10.7□□□□□ -0.7
VPS9D1-205ENST00000565452 RNF207Q6ZRF8 634 aa10.7□□□□□ -0.7
VPS9D1-205ENST00000565452 KCTD1Q719H9 257 aa10.7□□□□□ -0.7
VPS9D1-205ENST00000565452 CHST3Q7LGC8 479 aa10.7□□□□□ -0.7
VPS9D1-205ENST00000565452 DHX37Q8IY37 1157 aaKnown RBP10.7□□□□□ -0.7
VPS9D1-205ENST00000565452 CLASRPQ8N2M8 674 aaKnown RBP10.7□□□□□ -0.7
VPS9D1-205ENST00000565452 NEDD1Q8NHV4 660 aa10.7□□□□□ -0.7
VPS9D1-205ENST00000565452 FRAT1Q92837 279 aaPredicted RBP10.7□□□□□ -0.7
VPS9D1-205ENST00000565452 CLUAP1Q96AJ1 413 aa10.7□□□□□ -0.7
VPS9D1-205ENST00000565452 CHMP4CQ96CF2 233 aa10.7□□□□□ -0.7
VPS9D1-205ENST00000565452 CLEC1BQ9P126 229 aa10.7□□□□□ -0.7
VPS9D1-205ENST00000565452 USP15Q9Y4E8 981 aaPredicted RBP10.7□□□□□ -0.7
VPS9D1-205ENST00000565452 MYO5AQ9Y4I1 1855 aaKnown RBP10.7□□□□□ -0.7
VPS9D1-205ENST00000565452 MYO7AQ13402 2215 aa10.69□□□□□ -0.7
VPS9D1-205ENST00000565452 PRDM1O75626 825 aa10.69□□□□□ -0.7
VPS9D1-205ENST00000565452 MMP1P03956 469 aa10.69□□□□□ -0.7
VPS9D1-205ENST00000565452 EDNRBP24530 442 aa10.69□□□□□ -0.7
VPS9D1-205ENST00000565452 MFSD10Q14728 455 aa10.69□□□□□ -0.7
VPS9D1-205ENST00000565452 LY6KQ17RY6 165 aa10.69□□□□□ -0.7
VPS9D1-205ENST00000565452 NAALADL2Q58DX5 795 aa10.69□□□□□ -0.7
VPS9D1-205ENST00000565452 CCDC62Q6P9F0 684 aa10.69□□□□□ -0.7
VPS9D1-205ENST00000565452 UBALD2Q8IYN6 164 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms