RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 ARHGEF16Q5VV41 709 aa17.08■□□□□ 0.32
USB1-210ENST00000565151 RAB11FIP4Q86YS3 637 aa17.08■□□□□ 0.32
USB1-210ENST00000565151 CMTR1Q8N1G2 835 aaKnown RBP17.08■□□□□ 0.32
USB1-210ENST00000565151 SRBD1Q8N5C6 995 aaKnown RBP17.08■□□□□ 0.32
USB1-210ENST00000565151 MTG1Q9BT17 334 aaPredicted RBP17.08■□□□□ 0.32
USB1-210ENST00000565151 HIPK3Q9H422 1215 aa17.08■□□□□ 0.32
USB1-210ENST00000565151 POLR3EQ9NVU0 708 aa17.08■□□□□ 0.32
USB1-210ENST00000565151 CXXC1Q9P0U4 656 aaPredicted RBP17.08■□□□□ 0.32
USB1-210ENST00000565151 PNMA6FA0A0J9YX94 578 aa17.07■□□□□ 0.32
USB1-210ENST00000565151 ERICH2A1L162 156 aa17.07■□□□□ 0.32
USB1-210ENST00000565151 PBX2P40425 430 aa17.07■□□□□ 0.32
USB1-210ENST00000565151 SP2Q02086 613 aa17.07■□□□□ 0.32
USB1-210ENST00000565151 STXBP2Q15833 593 aa17.07■□□□□ 0.32
USB1-210ENST00000565151 CATIPQ7Z7H3 387 aa17.07■□□□□ 0.32
USB1-210ENST00000565151 RASEFQ8IZ41 740 aa17.07■□□□□ 0.32
USB1-210ENST00000565151 SCLYQ96I15 445 aa17.07■□□□□ 0.32
USB1-210ENST00000565151 ANO2Q9NQ90 1003 aa17.07■□□□□ 0.32
USB1-210ENST00000565151 EIF3JO75822 258 aaKnown RBP17.06■□□□□ 0.32
USB1-210ENST00000565151 MMP3P08254 477 aa17.06■□□□□ 0.32
USB1-210ENST00000565151 PPIGQ13427 754 aaKnown RBP eCLIP17.06■□□□□ 0.326e-8■□□□□ 9.1
USB1-210ENST00000565151 PGM5Q15124 567 aa17.06■□□□□ 0.32
USB1-210ENST00000565151 VSIG10LQ86VR7 867 aa17.06■□□□□ 0.32
USB1-210ENST00000565151 MAP3K14Q99558 947 aa17.06■□□□□ 0.32
USB1-210ENST00000565151 IL23AQ9NPF7 189 aa17.06■□□□□ 0.32
USB1-210ENST00000565151 TELO2Q9Y4R8 837 aa17.06■□□□□ 0.32
USB1-210ENST00000565151 FRMPD4Q14CM0 1322 aa17.05■□□□□ 0.32
USB1-210ENST00000565151 SORBS3O60504 671 aa17.05■□□□□ 0.32
USB1-210ENST00000565151 MYCLP12524 364 aaPredicted RBP17.05■□□□□ 0.32
USB1-210ENST00000565151 MCM5P33992 734 aa17.05■□□□□ 0.32
USB1-210ENST00000565151 MRPS9P82933 396 aaKnown RBP17.05■□□□□ 0.32
USB1-210ENST00000565151 HIC1Q14526 733 aa17.05■□□□□ 0.32
USB1-210ENST00000565151 SART3Q15020 963 aaKnown RBP17.05■□□□□ 0.32
USB1-210ENST00000565151 ADCK5Q3MIX3 580 aa17.05■□□□□ 0.32
USB1-210ENST00000565151 FCHSD1Q86WN1 690 aa17.05■□□□□ 0.32
USB1-210ENST00000565151 TMEM199Q8N511 208 aa17.05■□□□□ 0.32
USB1-210ENST00000565151 TCEANC2Q96MN5 208 aa17.05■□□□□ 0.32
USB1-210ENST00000565151 MPHOSPH6Q99547 160 aaKnown RBP17.05■□□□□ 0.32
USB1-210ENST00000565151 CDX2Q99626 313 aaPredicted RBP17.05■□□□□ 0.32
USB1-210ENST00000565151 SPZ1Q9BXG8 430 aa17.05■□□□□ 0.32
USB1-210ENST00000565151 hCG_1642624A0A1W2PR95 340 aa17.04■□□□□ 0.32
USB1-210ENST00000565151 B4DLN1 442 aa17.04■□□□□ 0.32
USB1-210ENST00000565151 DDAH1O94760 285 aa17.04■□□□□ 0.32
USB1-210ENST00000565151 GH1P01241 217 aa17.04■□□□□ 0.32
USB1-210ENST00000565151 LIFRP42702 1097 aa17.04■□□□□ 0.32
USB1-210ENST00000565151 MRPL12P52815 198 aaKnown RBP17.04■□□□□ 0.32
USB1-210ENST00000565151 SEMA3FQ13275 785 aa17.04■□□□□ 0.32
USB1-210ENST00000565151 GPNMBQ14956 572 aa17.04■□□□□ 0.32
USB1-210ENST00000565151 ZNF697Q5TEC3 545 aa17.04■□□□□ 0.32
USB1-210ENST00000565151 NFRKBQ6P4R8 1299 aa17.04■□□□□ 0.32
USB1-210ENST00000565151 EMID1Q96A84 441 aaPredicted RBP17.04■□□□□ 0.32
USB1-210ENST00000565151 MTA3Q9BTC8 594 aa17.04■□□□□ 0.32
USB1-210ENST00000565151 SEZ6LQ9BYH1 1024 aa17.04■□□□□ 0.32
USB1-210ENST00000565151 MAP3K20Q9NYL2 800 aaKnown RBP17.04■□□□□ 0.32
USB1-210ENST00000565151 KAT6AQ92794 2004 aa17.04■□□□□ 0.32
USB1-210ENST00000565151 GCOM1H8Y6P7 765 aaPredicted RBP17.03■□□□□ 0.32
USB1-210ENST00000565151 KPNA6O60684 536 aa17.03■□□□□ 0.32
USB1-210ENST00000565151 POLR2MP0CAP2 368 aa17.03■□□□□ 0.32
USB1-210ENST00000565151 EXOSC10Q01780 885 aaKnown RBP17.03■□□□□ 0.32
USB1-210ENST00000565151 HSDL1Q3SXM5 330 aa17.03■□□□□ 0.32
USB1-210ENST00000565151 FAM47CQ5HY64 1035 aa17.03■□□□□ 0.32
USB1-210ENST00000565151 MYSM1Q5VVJ2 828 aa17.03■□□□□ 0.32
USB1-210ENST00000565151 GDF6Q6KF10 455 aaPredicted RBP17.03■□□□□ 0.32
USB1-210ENST00000565151 HERVK_113Q902F9 699 aa17.03■□□□□ 0.32
USB1-210ENST00000565151 DHX38Q92620 1227 aaKnown RBP17.03■□□□□ 0.32
USB1-210ENST00000565151 TMEM87BQ96K49 555 aa17.03■□□□□ 0.32
USB1-210ENST00000565151 MRVI1Q9Y6F6 885 aa17.03■□□□□ 0.32
USB1-210ENST00000565151 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.02■□□□□ 0.32
USB1-210ENST00000565151 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.02■□□□□ 0.32
USB1-210ENST00000565151 HAS3O00219 553 aa17.02■□□□□ 0.32
USB1-210ENST00000565151 MEIS2O14770 477 aa17.02■□□□□ 0.32
USB1-210ENST00000565151 HOXD8P13378 290 aaPredicted RBP17.02■□□□□ 0.32
USB1-210ENST00000565151 DNAJB2P25686 324 aa17.02■□□□□ 0.32
USB1-210ENST00000565151 GRIN2CQ14957 1233 aa17.02■□□□□ 0.32
USB1-210ENST00000565151 USP17L6PQ6QN14 398 aa17.02■□□□□ 0.32
USB1-210ENST00000565151 CASC1Q6TDU7 716 aa17.02■□□□□ 0.32
USB1-210ENST00000565151 OTOP2Q7RTS6 562 aa17.02■□□□□ 0.32
USB1-210ENST00000565151 SGMS1Q86VZ5 419 aa17.02■□□□□ 0.32
USB1-210ENST00000565151 SAMD3Q8N6K7 520 aa17.02■□□□□ 0.32
USB1-210ENST00000565151 MYLIPQ8WY64 445 aa17.02■□□□□ 0.32
USB1-210ENST00000565151 PBX4Q9BYU1 374 aa17.02■□□□□ 0.32
USB1-210ENST00000565151 BRPF3Q9ULD4 1205 aa17.02■□□□□ 0.32
USB1-210ENST00000565151 ZNF286BP0CG31 522 aa17.01■□□□□ 0.31
USB1-210ENST00000565151 UBA1P22314 1058 aaKnown RBP17.01■□□□□ 0.31
USB1-210ENST00000565151 SMARCA1P28370 1054 aa17.01■□□□□ 0.31
USB1-210ENST00000565151 CHMP4BP1P59074 171 aa17.01■□□□□ 0.31
USB1-210ENST00000565151 FUT2Q10981 343 aa17.01■□□□□ 0.31
USB1-210ENST00000565151 CELF3Q5SZQ8 465 aaKnown RBP17.01■□□□□ 0.31
USB1-210ENST00000565151 PPTC7Q8NI37 304 aa17.01■□□□□ 0.31
USB1-210ENST00000565151 CTCFLQ8NI51 663 aaPredicted RBP17.01■□□□□ 0.31
USB1-210ENST00000565151 WNT8BQ93098 351 aa17.01■□□□□ 0.31
USB1-210ENST00000565151 TRANK1O15050 2925 aa17.01■□□□□ 0.31
USB1-210ENST00000565151 SIP14410 1827 aa17■□□□□ 0.31
USB1-210ENST00000565151 WDR81Q562E7 1941 aa17■□□□□ 0.31
USB1-210ENST00000565151 F2P00734 622 aa17■□□□□ 0.31
USB1-210ENST00000565151 FGBP02675 491 aa17■□□□□ 0.31
USB1-210ENST00000565151 CPA1P15085 419 aa17■□□□□ 0.31
USB1-210ENST00000565151 ZNF200P98182 395 aaPredicted RBP17■□□□□ 0.31
USB1-210ENST00000565151 PTPN11Q06124 597 aaPredicted RBP17■□□□□ 0.31
USB1-210ENST00000565151 LAMC2Q13753 1193 aa17■□□□□ 0.31
USB1-210ENST00000565151 TCTN1Q2MV58 587 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms