RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 LY6KQ17RY6 165 aa21.15■□□□□ 0.98
SYNGR3-204ENST00000564642 CCDC62Q6P9F0 684 aa21.15■□□□□ 0.98
SYNGR3-204ENST00000564642 BRF1Q92994 677 aa21.15■□□□□ 0.98
SYNGR3-204ENST00000564642 TRIM43Q96BQ3 446 aaPredicted RBP21.15■□□□□ 0.98
SYNGR3-204ENST00000564642 DNAH12Q6ZR08 3092 aa21.14■□□□□ 0.98
SYNGR3-204ENST00000564642 TRIOBPQ9H2D6 2365 aa21.14■□□□□ 0.97
SYNGR3-204ENST00000564642 LTBP2Q14767 1821 aa21.14■□□□□ 0.97
SYNGR3-204ENST00000564642 GH1P01241 217 aa21.14■□□□□ 0.97
SYNGR3-204ENST00000564642 RCAN1P53805 252 aa21.14■□□□□ 0.97
SYNGR3-204ENST00000564642 FAAP100Q0VG06 881 aa21.14■□□□□ 0.97
SYNGR3-204ENST00000564642 VSIG10LQ86VR7 867 aa21.14■□□□□ 0.97
SYNGR3-204ENST00000564642 SEZ6LQ9BYH1 1024 aa21.14■□□□□ 0.97
SYNGR3-204ENST00000564642 PSTPIP2Q9H939 334 aa21.14■□□□□ 0.97
SYNGR3-204ENST00000564642 MRVI1Q9Y6F6 885 aa21.14■□□□□ 0.97
SYNGR3-204ENST00000564642 MYH7BA7E2Y1 1941 aa21.14■□□□□ 0.97
SYNGR3-204ENST00000564642 CCDC196A0A1B0GTZ2 297 aa21.13■□□□□ 0.97
SYNGR3-204ENST00000564642 KPNA6O60684 536 aa21.13■□□□□ 0.97
SYNGR3-204ENST00000564642 RAG1P15918 1043 aa21.13■□□□□ 0.97
SYNGR3-204ENST00000564642 METAP2P50579 478 aaKnown RBP eCLIP21.13■□□□□ 0.97
SYNGR3-204ENST00000564642 KCNV1Q6PIU1 500 aa21.13■□□□□ 0.97
SYNGR3-204ENST00000564642 USP17L6PQ6QN14 398 aa21.13■□□□□ 0.97
SYNGR3-204ENST00000564642 HEATR3Q7Z4Q2 680 aa21.13■□□□□ 0.97
SYNGR3-204ENST00000564642 BADQ92934 168 aa21.13■□□□□ 0.97
SYNGR3-204ENST00000564642 DDX41Q9UJV9 622 aaKnown RBP21.13■□□□□ 0.97
SYNGR3-204ENST00000564642 CNTNAP5Q8WYK1 1306 aa21.12■□□□□ 0.97
SYNGR3-204ENST00000564642 A6NJR5 290 aa21.12■□□□□ 0.97
SYNGR3-204ENST00000564642 PIK3CDO00329 1044 aa21.12■□□□□ 0.97
SYNGR3-204ENST00000564642 KIAA0355O15063 1070 aa21.12■□□□□ 0.97
SYNGR3-204ENST00000564642 PSMC6P62333 389 aa21.12■□□□□ 0.97
SYNGR3-204ENST00000564642 PURAQ00577 322 aaKnown RBP21.12■□□□□ 0.97
SYNGR3-204ENST00000564642 RUFY3Q7L099 469 aa21.12■□□□□ 0.97
SYNGR3-204ENST00000564642 TDHQ8IZJ6 230 aa21.12■□□□□ 0.97
SYNGR3-204ENST00000564642 FBXL16Q8N461 479 aa21.12■□□□□ 0.97
SYNGR3-204ENST00000564642 IL31RAQ8NI17 732 aa21.12■□□□□ 0.97
SYNGR3-204ENST00000564642 MTG1Q9BT17 334 aaPredicted RBP21.12■□□□□ 0.97
SYNGR3-204ENST00000564642 CYP46A1Q9Y6A2 500 aa21.12■□□□□ 0.97
SYNGR3-204ENST00000564642 V9GY48 417 aaPredicted RBP21.12■□□□□ 0.97
SYNGR3-204ENST00000564642 MEIS2O14770 477 aa21.11■□□□□ 0.97
SYNGR3-204ENST00000564642 CDC27P30260 824 aa21.11■□□□□ 0.97
SYNGR3-204ENST00000564642 FAM126BQ8IXS8 530 aa21.11■□□□□ 0.97
SYNGR3-204ENST00000564642 DHX37Q8IY37 1157 aaKnown RBP21.11■□□□□ 0.97
SYNGR3-204ENST00000564642 SLC43A3Q8NBI5 491 aa21.11■□□□□ 0.97
SYNGR3-204ENST00000564642 GPKOWQ92917 476 aaPredicted RBP eCLIP21.11■□□□□ 0.97
SYNGR3-204ENST00000564642 ZSWIM6Q9HCJ5 1215 aa21.11■□□□□ 0.97
SYNGR3-204ENST00000564642 FAM217BQ9NTX9 383 aaPredicted RBP21.11■□□□□ 0.97
SYNGR3-204ENST00000564642 STAM2O75886 525 aa21.1■□□□□ 0.97
SYNGR3-204ENST00000564642 ADD1P35611 737 aaKnown RBP21.1■□□□□ 0.97
SYNGR3-204ENST00000564642 ARHGAP1Q07960 439 aa21.1■□□□□ 0.97
SYNGR3-204ENST00000564642 AFG1LQ8WV93 481 aa21.1■□□□□ 0.97
SYNGR3-204ENST00000564642 ZFP91Q96JP5 570 aaPredicted RBP21.1■□□□□ 0.97
SYNGR3-204ENST00000564642 AGXT2Q9BYV1 514 aa21.1■□□□□ 0.97
SYNGR3-204ENST00000564642 GRIN2DO15399 1336 aa21.09■□□□□ 0.97
SYNGR3-204ENST00000564642 FRMPD4Q14CM0 1322 aa21.09■□□□□ 0.97
SYNGR3-204ENST00000564642 RGS20O76081 388 aa21.09■□□□□ 0.97
SYNGR3-204ENST00000564642 TGFB3P10600 412 aa21.09■□□□□ 0.97
SYNGR3-204ENST00000564642 NAPAP54920 295 aa21.09■□□□□ 0.97
SYNGR3-204ENST00000564642 FUT2Q10981 343 aa21.09■□□□□ 0.97
SYNGR3-204ENST00000564642 LAMC2Q13753 1193 aa21.09■□□□□ 0.97
SYNGR3-204ENST00000564642 GNPTABQ3T906 1256 aa21.09■□□□□ 0.97
SYNGR3-204ENST00000564642 WWC2Q6AWC2 1192 aa21.09■□□□□ 0.97
SYNGR3-204ENST00000564642 TM6SF1Q9BZW5 370 aa21.09■□□□□ 0.97
SYNGR3-204ENST00000564642 hCG_1984214I3L0E3 225 aa21.08■□□□□ 0.97
SYNGR3-204ENST00000564642 EIF5BO60841 1220 aaKnown RBP21.08■□□□□ 0.97
SYNGR3-204ENST00000564642 TIMP1P01033 207 aa21.08■□□□□ 0.97
SYNGR3-204ENST00000564642 CD4P01730 458 aa21.08■□□□□ 0.97
SYNGR3-204ENST00000564642 MMP3P08254 477 aa21.08■□□□□ 0.97
SYNGR3-204ENST00000564642 ITGB8P26012 769 aa21.08■□□□□ 0.97
SYNGR3-204ENST00000564642 MRPS9P82933 396 aaKnown RBP21.08■□□□□ 0.97
SYNGR3-204ENST00000564642 ZNF713Q8N859 430 aaPredicted RBP21.08■□□□□ 0.97
SYNGR3-204ENST00000564642 RTEL1Q9NZ71 1219 aa21.08■□□□□ 0.97
SYNGR3-204ENST00000564642 TBX21Q9UL17 535 aa21.08■□□□□ 0.97
SYNGR3-204ENST00000564642 RANBP2P49792 3224 aaKnown RBP21.07■□□□□ 0.96
SYNGR3-204ENST00000564642 SPDYE3A6NKU9 549 aa21.07■□□□□ 0.96
SYNGR3-204ENST00000564642 CHMP4BP1P59074 171 aa21.07■□□□□ 0.96
SYNGR3-204ENST00000564642 DGKDQ16760 1214 aa21.07■□□□□ 0.96
SYNGR3-204ENST00000564642 UBE2SQ16763 222 aa21.07■□□□□ 0.96
SYNGR3-204ENST00000564642 PCNX4Q63HM2 1172 aa21.07■□□□□ 0.96
SYNGR3-204ENST00000564642 XRRA1Q6P2D8 792 aa21.07■□□□□ 0.96
SYNGR3-204ENST00000564642 EMID1Q96A84 441 aaPredicted RBP21.07■□□□□ 0.96
SYNGR3-204ENST00000564642 B4GALT4O60513 344 aa21.06■□□□□ 0.96
SYNGR3-204ENST00000564642 GGPS1O95749 300 aa21.06■□□□□ 0.96
SYNGR3-204ENST00000564642 NBPF20Q3BBV1 942 aa21.06■□□□□ 0.96
SYNGR3-204ENST00000564642 FAM47CQ5HY64 1035 aa21.06■□□□□ 0.96
SYNGR3-204ENST00000564642 CELF3Q5SZQ8 465 aaKnown RBP21.06■□□□□ 0.96
SYNGR3-204ENST00000564642 PPP1R18Q6NYC8 613 aa21.06■□□□□ 0.96
SYNGR3-204ENST00000564642 PPTC7Q8NI37 304 aa21.06■□□□□ 0.96
SYNGR3-204ENST00000564642 UPF3BQ9BZI7 483 aaKnown RBP21.06■□□□□ 0.96
SYNGR3-204ENST00000564642 TRPV6Q9H1D0 765 aa21.06■□□□□ 0.96
SYNGR3-204ENST00000564642 ALDH8A1Q9H2A2 487 aaPredicted RBP21.06■□□□□ 0.96
SYNGR3-204ENST00000564642 EHMT1Q9H9B1 1298 aa21.06■□□□□ 0.96
SYNGR3-204ENST00000564642 MLXIPQ9HAP2 919 aa21.06■□□□□ 0.96
SYNGR3-204ENST00000564642 PCDHA6Q9UN73 950 aa21.06■□□□□ 0.96
SYNGR3-204ENST00000564642 PCDHA8Q9Y5H6 950 aa21.06■□□□□ 0.96
SYNGR3-204ENST00000564642 COL6A3P12111 3177 aa21.05■□□□□ 0.96
SYNGR3-204ENST00000564642 SCN10AQ9Y5Y9 1956 aa21.05■□□□□ 0.96
SYNGR3-204ENST00000564642 SMCO2A6NFE2 343 aa21.05■□□□□ 0.96
SYNGR3-204ENST00000564642 STXBP3O00186 592 aa21.05■□□□□ 0.96
SYNGR3-204ENST00000564642 SORBS3O60504 671 aa21.05■□□□□ 0.96
SYNGR3-204ENST00000564642 SUPT20HL2P0C7V6 817 aa21.05■□□□□ 0.96
SYNGR3-204ENST00000564642 PDIA3P30101 505 aaKnown RBP21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms