RNA–Protein interactions for RNA: ENST00000564581.1

SUB1P3-201, Transcript of SUB1 homolog, transcriptional regulator pseudogene 3, humanhuman

BASIC

Gene SUB1P3, Length 315 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P3-201ENST00000564581 KREMEN2Q8NCW0 462 aa4.17□□□□□ -1.74
SUB1P3-201ENST00000564581 C11orf84Q9BUA3 381 aaPredicted RBP4.17□□□□□ -1.74
SUB1P3-201ENST00000564581 CAPN10Q9HC96 672 aa4.17□□□□□ -1.74
SUB1P3-201ENST00000564581 ACTR10Q9NZ32 417 aa4.17□□□□□ -1.74
SUB1P3-201ENST00000564581 LRP2BPQ9P2M1 347 aa4.17□□□□□ -1.74
SUB1P3-201ENST00000564581 PALD1Q9ULE6 856 aa4.17□□□□□ -1.74
SUB1P3-201ENST00000564581 STRIP2Q9ULQ0 834 aa4.17□□□□□ -1.74
SUB1P3-201ENST00000564581 SMARCA5O60264 1052 aaPredicted RBP4.16□□□□□ -1.74
SUB1P3-201ENST00000564581 DDAH1O94760 285 aa4.16□□□□□ -1.74
SUB1P3-201ENST00000564581 SSBP05455 408 aaKnown RBP eCLIP4.16□□□□□ -1.74
SUB1P3-201ENST00000564581 SNRPB2P08579 225 aaKnown RBP4.16□□□□□ -1.74
SUB1P3-201ENST00000564581 ERCC5P28715 1186 aaPredicted RBP4.16□□□□□ -1.74
SUB1P3-201ENST00000564581 ZNF143P52747 638 aaPredicted RBP4.16□□□□□ -1.74
SUB1P3-201ENST00000564581 RPL11P62913 178 aaKnown RBP4.16□□□□□ -1.74
SUB1P3-201ENST00000564581 ZFYVE27Q5T4F4 411 aa4.16□□□□□ -1.74
SUB1P3-201ENST00000564581 ETV3LQ6ZN32 361 aa4.16□□□□□ -1.74
SUB1P3-201ENST00000564581 TTLL7Q6ZT98 887 aa4.16□□□□□ -1.74
SUB1P3-201ENST00000564581 ZNF227Q86WZ6 799 aa4.16□□□□□ -1.74
SUB1P3-201ENST00000564581 DCP2Q8IU60 420 aaKnown RBP4.16□□□□□ -1.74
SUB1P3-201ENST00000564581 HOMEZQ8IX15 550 aa4.16□□□□□ -1.74
SUB1P3-201ENST00000564581 RCBTB1Q8NDN9 531 aa4.16□□□□□ -1.74
SUB1P3-201ENST00000564581 ADAMTS17Q8TE56 1095 aa4.16□□□□□ -1.74
SUB1P3-201ENST00000564581 DIO2Q92813 273 aa4.16□□□□□ -1.74
SUB1P3-201ENST00000564581 LNPKQ9C0E8 428 aa4.16□□□□□ -1.74
SUB1P3-201ENST00000564581 NTMQ9P121 344 aa4.16□□□□□ -1.74
SUB1P3-201ENST00000564581 TIMM13Q9Y5L4 95 aaPredicted RBP4.16□□□□□ -1.74
SUB1P3-201ENST00000564581 SUSD5O60279 629 aa4.15□□□□□ -1.75
SUB1P3-201ENST00000564581 ADRB1P08588 477 aa4.15□□□□□ -1.75
SUB1P3-201ENST00000564581 NAT2P11245 290 aa4.15□□□□□ -1.75
SUB1P3-201ENST00000564581 THBS2P35442 1172 aa4.15□□□□□ -1.75
SUB1P3-201ENST00000564581 GRIA2P42262 883 aa4.15□□□□□ -1.75
SUB1P3-201ENST00000564581 KCNJ6P48051 423 aa4.15□□□□□ -1.75
SUB1P3-201ENST00000564581 GJA9P57773 515 aa4.15□□□□□ -1.75
SUB1P3-201ENST00000564581 EFEMP1Q12805 493 aa4.15□□□□□ -1.75
SUB1P3-201ENST00000564581 ERICH6BQ5W0A0 696 aa4.15□□□□□ -1.75
SUB1P3-201ENST00000564581 MCTP2Q6DN12 878 aa4.15□□□□□ -1.75
SUB1P3-201ENST00000564581 HHIPL2Q6UWX4 724 aa4.15□□□□□ -1.75
SUB1P3-201ENST00000564581 SEC14L1Q92503 715 aa4.15□□□□□ -1.75
SUB1P3-201ENST00000564581 ZNF428Q96B54 188 aa4.15□□□□□ -1.75
SUB1P3-201ENST00000564581 TRMT2BQ96GJ1 504 aaKnown RBP4.15□□□□□ -1.75
SUB1P3-201ENST00000564581 CHAMP1Q96JM3 812 aa4.15□□□□□ -1.75
SUB1P3-201ENST00000564581 AP5M1Q9H0R1 490 aa4.15□□□□□ -1.75
SUB1P3-201ENST00000564581 PCDHA2Q9Y5H9 948 aa4.15□□□□□ -1.75
SUB1P3-201ENST00000564581 DDX3XO00571 662 aaKnown RBP eCLIP4.14□□□□□ -1.75
SUB1P3-201ENST00000564581 MEFVO15553 781 aaPredicted RBP4.14□□□□□ -1.75
SUB1P3-201ENST00000564581 INSRRP14616 1297 aa4.14□□□□□ -1.75
SUB1P3-201ENST00000564581 HOXC12P31275 282 aa4.14□□□□□ -1.75
SUB1P3-201ENST00000564581 ITGA1P56199 1179 aa4.14□□□□□ -1.75
SUB1P3-201ENST00000564581 CR1LQ2VPA4 569 aa4.14□□□□□ -1.75
SUB1P3-201ENST00000564581 RGL3Q3MIN7 710 aa4.14□□□□□ -1.75
SUB1P3-201ENST00000564581 IQCEQ6IPM2 695 aa4.14□□□□□ -1.75
SUB1P3-201ENST00000564581 MIB1Q86YT6 1006 aa4.14□□□□□ -1.75
SUB1P3-201ENST00000564581 PPIL6Q8IXY8 311 aa4.14□□□□□ -1.75
SUB1P3-201ENST00000564581 KYQ8NBH2 561 aa4.14□□□□□ -1.75
SUB1P3-201ENST00000564581 TMEM145Q8NBT3 493 aa4.14□□□□□ -1.75
SUB1P3-201ENST00000564581 ARRDC4Q8NCT1 418 aa4.14□□□□□ -1.75
SUB1P3-201ENST00000564581 TMEM169Q96HH4 297 aa4.14□□□□□ -1.75
SUB1P3-201ENST00000564581 ZSWIM3Q96MP5 696 aa4.14□□□□□ -1.75
SUB1P3-201ENST00000564581 ST7Q9NRC1 585 aa4.14□□□□□ -1.75
SUB1P3-201ENST00000564581 PRKAG3Q9UGI9 489 aa4.14□□□□□ -1.75
SUB1P3-201ENST00000564581 X6R8D5 127 aa4.14□□□□□ -1.75
SUB1P3-201ENST00000564581 K7ESM1 405 aa4.13□□□□□ -1.75
SUB1P3-201ENST00000564581 GJB6O95452 261 aa4.13□□□□□ -1.75
SUB1P3-201ENST00000564581 RPL13P26373 211 aaKnown RBP4.13□□□□□ -1.75
SUB1P3-201ENST00000564581 GFRA1P56159 465 aa4.13□□□□□ -1.75
SUB1P3-201ENST00000564581 ADAM9Q13443 819 aa4.13□□□□□ -1.75
SUB1P3-201ENST00000564581 SPATS1Q496A3 300 aa4.13□□□□□ -1.75
SUB1P3-201ENST00000564581 MROH9Q5TGP6 573 aa4.13□□□□□ -1.75
SUB1P3-201ENST00000564581 E4F1Q66K89 784 aaPredicted RBP4.13□□□□□ -1.75
SUB1P3-201ENST00000564581 DBX2Q6ZNG2 339 aa4.13□□□□□ -1.75
SUB1P3-201ENST00000564581 VPS37DQ86XT2 251 aa4.13□□□□□ -1.75
SUB1P3-201ENST00000564581 TXNDC5Q8NBS9 432 aaKnown RBP4.13□□□□□ -1.75
SUB1P3-201ENST00000564581 RBM15Q96T37 977 aaKnown RBP eCLIP4.13□□□□□ -1.75
SUB1P3-201ENST00000564581 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.13□□□□□ -1.75
SUB1P3-201ENST00000564581 ZNF408Q9H9D4 720 aa4.13□□□□□ -1.75
SUB1P3-201ENST00000564581 RBPJLQ9UBG7 517 aa4.13□□□□□ -1.75
SUB1P3-201ENST00000564581 WASF3Q9UPY6 502 aa4.13□□□□□ -1.75
SUB1P3-201ENST00000564581 INVSQ9Y283 1065 aa4.13□□□□□ -1.75
SUB1P3-201ENST00000564581 MSCO60682 206 aa4.12□□□□□ -1.75
SUB1P3-201ENST00000564581 SCG5P05408 212 aa4.12□□□□□ -1.75
SUB1P3-201ENST00000564581 SLC6A11P48066 632 aa4.12□□□□□ -1.75
SUB1P3-201ENST00000564581 PUM1Q14671 1186 aaKnown RBP eCLIP4.12□□□□□ -1.75
SUB1P3-201ENST00000564581 TBC1D10BQ4KMP7 808 aaPredicted RBP4.12□□□□□ -1.75
SUB1P3-201ENST00000564581 TNNI3KQ59H18 835 aa4.12□□□□□ -1.75
SUB1P3-201ENST00000564581 PRR31Q5SQ13 230 aa4.12□□□□□ -1.75
SUB1P3-201ENST00000564581 RIOX2Q8IUF8 465 aa4.12□□□□□ -1.75
SUB1P3-201ENST00000564581 FAM126BQ8IXS8 530 aa4.12□□□□□ -1.75
SUB1P3-201ENST00000564581 Q8N1Y9 231 aa4.12□□□□□ -1.75
SUB1P3-201ENST00000564581 CELF2-AS1Q8N7Q2 184 aa4.12□□□□□ -1.75
SUB1P3-201ENST00000564581 HNRNPLLQ8WVV9 542 aaKnown RBP4.12□□□□□ -1.75
SUB1P3-201ENST00000564581 C1orf159Q96HA4 380 aa4.12□□□□□ -1.75
SUB1P3-201ENST00000564581 YIPF4Q9BSR8 244 aa4.12□□□□□ -1.75
SUB1P3-201ENST00000564581 JAM3Q9BX67 310 aa4.12□□□□□ -1.75
SUB1P3-201ENST00000564581 CLDND1Q9NY35 253 aa4.12□□□□□ -1.75
SUB1P3-201ENST00000564581 PPARGC1AQ9UBK2 798 aaKnown RBP4.12□□□□□ -1.75
SUB1P3-201ENST00000564581 A0A1W2PQU0 124 aa4.11□□□□□ -1.75
SUB1P3-201ENST00000564581 TCRBV5S2A0A599 114 aa4.11□□□□□ -1.75
SUB1P3-201ENST00000564581 HGSO14964 777 aaPredicted RBP4.11□□□□□ -1.75
SUB1P3-201ENST00000564581 MYO1BO43795 1136 aa4.11□□□□□ -1.75
SUB1P3-201ENST00000564581 CPP00450 1065 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms