RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 ARHGEF15O94989 841 aa16.47■□□□□ 0.23
CDR2-204ENST00000564542 KCNJ6P48051 423 aa16.47■□□□□ 0.23
CDR2-204ENST00000564542 RBL2Q08999 1139 aa16.47■□□□□ 0.23
CDR2-204ENST00000564542 STXBP2Q15833 593 aa16.47■□□□□ 0.23
CDR2-204ENST00000564542 GDF6Q6KF10 455 aaPredicted RBP16.47■□□□□ 0.23
CDR2-204ENST00000564542 TBC1D5Q92609 795 aa16.47■□□□□ 0.23
CDR2-204ENST00000564542 KAT2BQ92831 832 aa16.47■□□□□ 0.23
CDR2-204ENST00000564542 EMID1Q96A84 441 aaPredicted RBP16.47■□□□□ 0.23
CDR2-204ENST00000564542 ZSCAN10Q96SZ4 725 aaPredicted RBP16.47■□□□□ 0.23
CDR2-204ENST00000564542 RMDN3Q96TC7 470 aa16.47■□□□□ 0.23
CDR2-204ENST00000564542 TRIP12Q14669 1992 aaPredicted RBP16.47■□□□□ 0.23
CDR2-204ENST00000564542 TLL1O43897 1013 aa16.46■□□□□ 0.23
CDR2-204ENST00000564542 PARNO95453 639 aaKnown RBP16.46■□□□□ 0.23
CDR2-204ENST00000564542 SELPP16109 830 aa16.46■□□□□ 0.23
CDR2-204ENST00000564542 CASTP20810 708 aaKnown RBP16.46■□□□□ 0.23
CDR2-204ENST00000564542 KCNQ1P51787 676 aa16.46■□□□□ 0.23
CDR2-204ENST00000564542 WDR5P61964 334 aaKnown RBP16.46■□□□□ 0.23
CDR2-204ENST00000564542 DGKDQ16760 1214 aa16.46■□□□□ 0.23
CDR2-204ENST00000564542 QRICH1Q2TAL8 776 aa16.46■□□□□ 0.23
CDR2-204ENST00000564542 LRRC8DQ7L1W4 858 aa16.46■□□□□ 0.23
CDR2-204ENST00000564542 CHST3Q7LGC8 479 aa16.46■□□□□ 0.23
CDR2-204ENST00000564542 ENAHQ8N8S7 591 aaPredicted RBP16.46■□□□□ 0.23
CDR2-204ENST00000564542 DHX38Q92620 1227 aaKnown RBP16.46■□□□□ 0.23
CDR2-204ENST00000564542 NECAB3Q96P71 396 aaPredicted RBP16.46■□□□□ 0.23
CDR2-204ENST00000564542 GTF2IRD1Q9UHL9 959 aa16.46■□□□□ 0.23
CDR2-204ENST00000564542 MRPL11Q9Y3B7 192 aaKnown RBP16.46■□□□□ 0.23
CDR2-204ENST00000564542 TCF20Q9UGU0 1960 aaKnown RBP16.46■□□□□ 0.22
CDR2-204ENST00000564542 B4E1Z4 1266 aa16.45■□□□□ 0.22
CDR2-204ENST00000564542 EIF3JO75822 258 aaKnown RBP16.45■□□□□ 0.22
CDR2-204ENST00000564542 PARP1P09874 1014 aaKnown RBP16.45■□□□□ 0.22
CDR2-204ENST00000564542 GPNMBQ14956 572 aa16.45■□□□□ 0.22
CDR2-204ENST00000564542 ARHGEF16Q5VV41 709 aa16.45■□□□□ 0.22
CDR2-204ENST00000564542 KRT40Q6A162 431 aa16.45■□□□□ 0.22
CDR2-204ENST00000564542 CNKSR3Q6P9H4 555 aa16.45■□□□□ 0.22
CDR2-204ENST00000564542 CWC27Q6UX04 472 aaKnown RBP16.45■□□□□ 0.22
CDR2-204ENST00000564542 FBXO11Q86XK2 927 aa16.45■□□□□ 0.22
CDR2-204ENST00000564542 SMC5Q8IY18 1101 aa16.45■□□□□ 0.22
CDR2-204ENST00000564542 KATNAL1Q9BW62 490 aa16.45■□□□□ 0.22
CDR2-204ENST00000564542 OSBPL3Q9H4L5 887 aa16.45■□□□□ 0.22
CDR2-204ENST00000564542 DDX41Q9UJV9 622 aaKnown RBP16.45■□□□□ 0.22
CDR2-204ENST00000564542 COG5Q9UP83 839 aa16.45■□□□□ 0.22
CDR2-204ENST00000564542 DHX16O60231 1041 aaKnown RBP16.44■□□□□ 0.22
CDR2-204ENST00000564542 F2P00734 622 aa16.44■□□□□ 0.22
CDR2-204ENST00000564542 CXCL10P02778 98 aa16.44■□□□□ 0.22
CDR2-204ENST00000564542 CKBP12277 381 aa16.44■□□□□ 0.22
CDR2-204ENST00000564542 EIF2AK2P19525 551 aaKnown RBP16.44■□□□□ 0.22
CDR2-204ENST00000564542 GRB10Q13322 594 aa16.44■□□□□ 0.22
CDR2-204ENST00000564542 AAMPQ13685 434 aa16.44■□□□□ 0.22
CDR2-204ENST00000564542 C7orf31Q8N865 590 aa16.44■□□□□ 0.22
CDR2-204ENST00000564542 PPTC7Q8NI37 304 aa16.44■□□□□ 0.22
CDR2-204ENST00000564542 JMJD4Q9H9V9 463 aa16.44■□□□□ 0.22
CDR2-204ENST00000564542 PXMP2Q9NR77 195 aa16.44■□□□□ 0.22
CDR2-204ENST00000564542 DIAPH3Q9NSV4 1193 aa16.44■□□□□ 0.22
CDR2-204ENST00000564542 MRVI1Q9Y6F6 885 aa16.44■□□□□ 0.22
CDR2-204ENST00000564542 LCHNA4D1U4 455 aa16.43■□□□□ 0.22
CDR2-204ENST00000564542 HIP1O00291 1037 aa16.43■□□□□ 0.22
CDR2-204ENST00000564542 LPXNO60711 386 aa16.43■□□□□ 0.22
CDR2-204ENST00000564542 NBNO60934 754 aa16.43■□□□□ 0.22
CDR2-204ENST00000564542 NR3C2P08235 984 aa16.43■□□□□ 0.22
CDR2-204ENST00000564542 PSEN2P49810 448 aa16.43■□□□□ 0.22
CDR2-204ENST00000564542 HSD17B4P51659 736 aa16.43■□□□□ 0.22
CDR2-204ENST00000564542 GHRHRQ02643 423 aa16.43■□□□□ 0.22
CDR2-204ENST00000564542 LAMC2Q13753 1193 aa16.43■□□□□ 0.22
CDR2-204ENST00000564542 IMMTQ16891 758 aaKnown RBP16.43■□□□□ 0.22
CDR2-204ENST00000564542 SPRED2Q7Z698 418 aa16.43■□□□□ 0.22
CDR2-204ENST00000564542 PLEKHM2Q8IWE5 1019 aa16.43■□□□□ 0.22
CDR2-204ENST00000564542 DSCC1Q9BVC3 393 aa16.43■□□□□ 0.22
CDR2-204ENST00000564542 KRT23Q9C075 422 aa16.43■□□□□ 0.22
CDR2-204ENST00000564542 ZSWIM5Q9P217 1185 aa16.43■□□□□ 0.22
CDR2-204ENST00000564542 HDAC6Q9UBN7 1215 aa16.43■□□□□ 0.22
CDR2-204ENST00000564542 RAPGEFL1Q9UHV5 662 aa16.43■□□□□ 0.22
CDR2-204ENST00000564542 ABHD14A-ACY1A0A1B0GW23 586 aa16.42■□□□□ 0.22
CDR2-204ENST00000564542 HAS3O00219 553 aa16.42■□□□□ 0.22
CDR2-204ENST00000564542 OPLAHO14841 1288 aa16.42■□□□□ 0.22
CDR2-204ENST00000564542 EFCAB14O75071 495 aa16.42■□□□□ 0.22
CDR2-204ENST00000564542 CFBP00751 764 aa16.42■□□□□ 0.22
CDR2-204ENST00000564542 ZNF286BP0CG31 522 aa16.42■□□□□ 0.22
CDR2-204ENST00000564542 HOXD8P13378 290 aaPredicted RBP16.42■□□□□ 0.22
CDR2-204ENST00000564542 DEFB103AP81534 67 aa16.42■□□□□ 0.22
CDR2-204ENST00000564542 PTK7Q13308 1070 aa16.42■□□□□ 0.22
CDR2-204ENST00000564542 MFSD10Q14728 455 aa16.42■□□□□ 0.22
CDR2-204ENST00000564542 KIAA0753Q2KHM9 967 aa16.42■□□□□ 0.22
CDR2-204ENST00000564542 B4GALNT3Q6L9W6 998 aa16.42■□□□□ 0.22
CDR2-204ENST00000564542 TMCO2Q7Z6W1 182 aaPredicted RBP16.42■□□□□ 0.22
CDR2-204ENST00000564542 CHD1LQ86WJ1 897 aa16.42■□□□□ 0.22
CDR2-204ENST00000564542 HLA-CQ95604 372 aa16.42■□□□□ 0.22
CDR2-204ENST00000564542 UBAC1Q9BSL1 405 aa16.42■□□□□ 0.22
CDR2-204ENST00000564542 ZBED2Q9BTP6 218 aa16.42■□□□□ 0.22
CDR2-204ENST00000564542 C1QTNF1Q9BXJ1 281 aa16.42■□□□□ 0.22
CDR2-204ENST00000564542 AMNQ9BXJ7 453 aa16.42■□□□□ 0.22
CDR2-204ENST00000564542 CNNM2Q9H8M5 875 aa16.42■□□□□ 0.22
CDR2-204ENST00000564542 VAT1LQ9HCJ6 419 aa16.42■□□□□ 0.22
CDR2-204ENST00000564542 SIP14410 1827 aa16.41■□□□□ 0.22
CDR2-204ENST00000564542 GJB5O95377 273 aa16.41■□□□□ 0.22
CDR2-204ENST00000564542 TRIM71Q2Q1W2 868 aaKnown RBP16.41■□□□□ 0.22
CDR2-204ENST00000564542 DHX37Q8IY37 1157 aaKnown RBP16.41■□□□□ 0.22
CDR2-204ENST00000564542 PDCD2LQ9BRP1 358 aa16.41■□□□□ 0.22
CDR2-204ENST00000564542 ALG1Q9BT22 464 aa16.41■□□□□ 0.22
CDR2-204ENST00000564542 RWDD1Q9H446 243 aaPredicted RBP16.41■□□□□ 0.22
CDR2-204ENST00000564542 MAP3K20Q9NYL2 800 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms