RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 CCDC62Q6P9F0 684 aa22.87■■□□□ 1.25
CMTM3-207ENST00000564060 RUFY3Q7L099 469 aa22.87■■□□□ 1.25
CMTM3-207ENST00000564060 VSIG10LQ86VR7 867 aa22.87■■□□□ 1.25
CMTM3-207ENST00000564060 TM6SF1Q9BZW5 370 aa22.87■■□□□ 1.25
CMTM3-207ENST00000564060 CYP46A1Q9Y6A2 500 aa22.87■■□□□ 1.25
CMTM3-207ENST00000564060 NID2Q14112 1375 aa22.87■■□□□ 1.25
CMTM3-207ENST00000564060 SCN10AQ9Y5Y9 1956 aa22.87■■□□□ 1.25
CMTM3-207ENST00000564060 GH1P01241 217 aa22.86■■□□□ 1.25
CMTM3-207ENST00000564060 APOBRQ0VD83 1088 aa22.86■■□□□ 1.25
CMTM3-207ENST00000564060 PPP1R18Q6NYC8 613 aa22.86■■□□□ 1.25
CMTM3-207ENST00000564060 HEATR3Q7Z4Q2 680 aa22.86■■□□□ 1.25
CMTM3-207ENST00000564060 UBE2OQ9C0C9 1292 aaKnown RBP22.86■■□□□ 1.25
CMTM3-207ENST00000564060 PSTPIP2Q9H939 334 aa22.86■■□□□ 1.25
CMTM3-207ENST00000564060 ZSWIM6Q9HCJ5 1215 aa22.86■■□□□ 1.25
CMTM3-207ENST00000564060 TRIOBPQ9H2D6 2365 aa22.86■■□□□ 1.25
CMTM3-207ENST00000564060 A6NJR5 290 aa22.85■■□□□ 1.25
CMTM3-207ENST00000564060 ARIH2O95376 493 aa22.85■■□□□ 1.25
CMTM3-207ENST00000564060 PTGS1P23219 599 aa22.85■■□□□ 1.25
CMTM3-207ENST00000564060 CDK7P50613 346 aa22.85■■□□□ 1.25
CMTM3-207ENST00000564060 MDM2Q00987 491 aaPredicted RBP22.85■■□□□ 1.25
CMTM3-207ENST00000564060 ITGA7Q13683 1181 aa22.85■■□□□ 1.25
CMTM3-207ENST00000564060 GNPTABQ3T906 1256 aa22.85■■□□□ 1.25
CMTM3-207ENST00000564060 TMEM39AQ9NV64 488 aa22.85■■□□□ 1.25
CMTM3-207ENST00000564060 DDX41Q9UJV9 622 aaKnown RBP22.85■■□□□ 1.25
CMTM3-207ENST00000564060 MEIS2O14770 477 aa22.84■■□□□ 1.25
CMTM3-207ENST00000564060 KIAA0355O15063 1070 aa22.84■■□□□ 1.25
CMTM3-207ENST00000564060 TGFB3P10600 412 aa22.84■■□□□ 1.25
CMTM3-207ENST00000564060 PURAQ00577 322 aaKnown RBP22.84■■□□□ 1.25
CMTM3-207ENST00000564060 LY6KQ17RY6 165 aa22.84■■□□□ 1.25
CMTM3-207ENST00000564060 XRRA1Q6P2D8 792 aa22.84■■□□□ 1.25
CMTM3-207ENST00000564060 USP17L6PQ6QN14 398 aa22.84■■□□□ 1.25
CMTM3-207ENST00000564060 COPS5Q92905 334 aa22.84■■□□□ 1.25
CMTM3-207ENST00000564060 MTG1Q9BT17 334 aaPredicted RBP22.84■■□□□ 1.25
CMTM3-207ENST00000564060 hCG_1642624A0A1W2PR95 340 aa22.83■■□□□ 1.25
CMTM3-207ENST00000564060 MYL3P08590 195 aa22.83■■□□□ 1.25
CMTM3-207ENST00000564060 RAG1P15918 1043 aa22.83■■□□□ 1.25
CMTM3-207ENST00000564060 CDC27P30260 824 aa22.83■■□□□ 1.25
CMTM3-207ENST00000564060 NAPAP54920 295 aa22.83■■□□□ 1.25
CMTM3-207ENST00000564060 FAAP100Q0VG06 881 aa22.83■■□□□ 1.25
CMTM3-207ENST00000564060 FUT2Q10981 343 aa22.83■■□□□ 1.25
CMTM3-207ENST00000564060 TDHQ8IZJ6 230 aa22.83■■□□□ 1.25
CMTM3-207ENST00000564060 SLC43A3Q8NBI5 491 aa22.83■■□□□ 1.25
CMTM3-207ENST00000564060 EMID1Q96A84 441 aaPredicted RBP22.83■■□□□ 1.25
CMTM3-207ENST00000564060 GLT8D2Q9H1C3 349 aa22.83■■□□□ 1.25
CMTM3-207ENST00000564060 EHMT1Q9H9B1 1298 aa22.83■■□□□ 1.25
CMTM3-207ENST00000564060 SPDYE3A6NKU9 549 aa22.82■■□□□ 1.24
CMTM3-207ENST00000564060 EVCP57679 992 aa22.82■■□□□ 1.24
CMTM3-207ENST00000564060 ANAPC15P60006 121 aa22.82■■□□□ 1.24
CMTM3-207ENST00000564060 ARHGAP1Q07960 439 aa22.82■■□□□ 1.24
CMTM3-207ENST00000564060 LAMC2Q13753 1193 aa22.82■■□□□ 1.24
CMTM3-207ENST00000564060 PCNX4Q63HM2 1172 aa22.82■■□□□ 1.24
CMTM3-207ENST00000564060 WWC2Q6AWC2 1192 aa22.82■■□□□ 1.24
CMTM3-207ENST00000564060 FAM126BQ8IXS8 530 aa22.82■■□□□ 1.24
CMTM3-207ENST00000564060 IL31RAQ8NI17 732 aa22.82■■□□□ 1.24
CMTM3-207ENST00000564060 GPKOWQ92917 476 aaPredicted RBP eCLIP22.82■■□□□ 1.24
CMTM3-207ENST00000564060 FAM217BQ9NTX9 383 aaPredicted RBP22.82■■□□□ 1.24
CMTM3-207ENST00000564060 V9GY48 417 aaPredicted RBP22.82■■□□□ 1.24
CMTM3-207ENST00000564060 TRIM43BA6NCK2 446 aa22.81■■□□□ 1.24
CMTM3-207ENST00000564060 AKAP17AQ02040 695 aaKnown RBP22.81■■□□□ 1.24
CMTM3-207ENST00000564060 SH3RF1Q7Z6J0 888 aa22.81■■□□□ 1.24
CMTM3-207ENST00000564060 DHX37Q8IY37 1157 aaKnown RBP22.81■■□□□ 1.24
CMTM3-207ENST00000564060 TRIM43Q96BQ3 446 aaPredicted RBP22.81■■□□□ 1.24
CMTM3-207ENST00000564060 DOCK5Q9H7D0 1870 aa22.81■■□□□ 1.24
CMTM3-207ENST00000564060 MMP3P08254 477 aa22.8■■□□□ 1.24
CMTM3-207ENST00000564060 ADD1P35611 737 aaKnown RBP22.8■■□□□ 1.24
CMTM3-207ENST00000564060 CCDC12Q8WUD4 166 aaPredicted RBP22.8■■□□□ 1.24
CMTM3-207ENST00000564060 AFG1LQ8WV93 481 aa22.8■■□□□ 1.24
CMTM3-207ENST00000564060 BADQ92934 168 aa22.8■■□□□ 1.24
CMTM3-207ENST00000564060 INPP4AQ96PE3 977 aaPredicted RBP22.8■■□□□ 1.24
CMTM3-207ENST00000564060 BARHL2Q9NY43 387 aa22.8■■□□□ 1.24
CMTM3-207ENST00000564060 TBX21Q9UL17 535 aa22.8■■□□□ 1.24
CMTM3-207ENST00000564060 FIBPO43427 364 aa22.79■■□□□ 1.24
CMTM3-207ENST00000564060 RGS20O76081 388 aa22.79■■□□□ 1.24
CMTM3-207ENST00000564060 FXR1P51114 621 aaKnown RBP eCLIP22.79■■□□□ 1.24
CMTM3-207ENST00000564060 DGKDQ16760 1214 aa22.79■■□□□ 1.24
CMTM3-207ENST00000564060 PFKFB3Q16875 520 aaPredicted RBP22.79■■□□□ 1.24
CMTM3-207ENST00000564060 NLRX1Q86UT6 975 aa22.79■■□□□ 1.24
CMTM3-207ENST00000564060 PPTC7Q8NI37 304 aa22.79■■□□□ 1.24
CMTM3-207ENST00000564060 RIC8AQ9NPQ8 531 aa22.79■■□□□ 1.24
CMTM3-207ENST00000564060 TIMP1P01033 207 aa22.78■■□□□ 1.24
CMTM3-207ENST00000564060 FOSP01100 380 aaPredicted RBP22.78■■□□□ 1.24
CMTM3-207ENST00000564060 CD4P01730 458 aa22.78■■□□□ 1.24
CMTM3-207ENST00000564060 SCG2P13521 617 aa22.78■■□□□ 1.24
CMTM3-207ENST00000564060 ICAM3P32942 547 aa22.78■■□□□ 1.24
CMTM3-207ENST00000564060 ADCY7P51828 1080 aa22.78■■□□□ 1.24
CMTM3-207ENST00000564060 PSMC6P62333 389 aa22.78■■□□□ 1.24
CMTM3-207ENST00000564060 MRPS9P82933 396 aaKnown RBP22.78■■□□□ 1.24
CMTM3-207ENST00000564060 PTPN11Q06124 597 aaPredicted RBP22.78■■□□□ 1.24
CMTM3-207ENST00000564060 TOB2Q14106 344 aaPredicted RBP22.78■■□□□ 1.24
CMTM3-207ENST00000564060 NFRKBQ6P4R8 1299 aa22.78■■□□□ 1.24
CMTM3-207ENST00000564060 CDHR1Q96JP9 859 aa22.78■■□□□ 1.24
CMTM3-207ENST00000564060 KATNAL1Q9BW62 490 aa22.78■■□□□ 1.24
CMTM3-207ENST00000564060 RNF26Q9BY78 433 aaPredicted RBP22.78■■□□□ 1.24
CMTM3-207ENST00000564060 UPF3BQ9BZI7 483 aaKnown RBP22.78■■□□□ 1.24
CMTM3-207ENST00000564060 PDRG1Q9NUG6 133 aa22.78■■□□□ 1.24
CMTM3-207ENST00000564060 GRIN2DO15399 1336 aa22.78■■□□□ 1.24
CMTM3-207ENST00000564060 STXBP3O00186 592 aa22.77■■□□□ 1.24
CMTM3-207ENST00000564060 PRPF3O43395 683 aaKnown RBP22.77■■□□□ 1.24
CMTM3-207ENST00000564060 GGPS1O95749 300 aa22.77■■□□□ 1.24
CMTM3-207ENST00000564060 SUPT20HL2P0C7V6 817 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms