RNA–Protein interactions for RNA: ENST00000563672.5

CMTM3-206, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-206ENST00000563672 TEX2Q8IWB9 1127 aa23.33■■□□□ 1.33
CMTM3-206ENST00000563672 COPS5Q92905 334 aa23.33■■□□□ 1.33
CMTM3-206ENST00000563672 RBM27Q9P2N5 1060 aaKnown RBP23.33■■□□□ 1.33
CMTM3-206ENST00000563672 ELP1O95163 1332 aa23.33■■□□□ 1.32
CMTM3-206ENST00000563672 SCG2P13521 617 aa23.32■■□□□ 1.32
CMTM3-206ENST00000563672 NAPAP54920 295 aa23.32■■□□□ 1.32
CMTM3-206ENST00000563672 PHKBQ93100 1093 aa23.32■■□□□ 1.32
CMTM3-206ENST00000563672 GLT1D1Q96MS3 346 aa23.32■■□□□ 1.32
CMTM3-206ENST00000563672 RIC8AQ9NPQ8 531 aa23.32■■□□□ 1.32
CMTM3-206ENST00000563672 STARD7Q9NQZ5 370 aa23.32■■□□□ 1.32
CMTM3-206ENST00000563672 DDX41Q9UJV9 622 aaKnown RBP23.32■■□□□ 1.32
CMTM3-206ENST00000563672 ZEB2O60315 1214 aa23.31■■□□□ 1.32
CMTM3-206ENST00000563672 MRPS9P82933 396 aaKnown RBP23.31■■□□□ 1.32
CMTM3-206ENST00000563672 UBE2SQ16763 222 aa23.31■■□□□ 1.32
CMTM3-206ENST00000563672 LY6KQ17RY6 165 aa23.31■■□□□ 1.32
CMTM3-206ENST00000563672 OR6J1Q8NGC5 347 aa23.31■■□□□ 1.32
CMTM3-206ENST00000563672 RNF26Q9BY78 433 aaPredicted RBP23.31■■□□□ 1.32
CMTM3-206ENST00000563672 AK2P54819 239 aa23.3■■□□□ 1.32
CMTM3-206ENST00000563672 ANKRD1Q15327 319 aa23.3■■□□□ 1.32
CMTM3-206ENST00000563672 TRIM60Q495X7 471 aa23.3■■□□□ 1.32
CMTM3-206ENST00000563672 XRRA1Q6P2D8 792 aa23.3■■□□□ 1.32
CMTM3-206ENST00000563672 CXCL17Q6UXB2 119 aa23.3■■□□□ 1.32
CMTM3-206ENST00000563672 ZFP91Q96JP5 570 aaPredicted RBP23.3■■□□□ 1.32
CMTM3-206ENST00000563672 TPCN1Q9ULQ1 816 aa23.3■■□□□ 1.32
CMTM3-206ENST00000563672 ATP11BQ9Y2G3 1177 aa23.3■■□□□ 1.32
CMTM3-206ENST00000563672 SMCO2A6NFE2 343 aa23.29■■□□□ 1.32
CMTM3-206ENST00000563672 A6NJR5 290 aa23.29■■□□□ 1.32
CMTM3-206ENST00000563672 STAM2O75886 525 aa23.29■■□□□ 1.32
CMTM3-206ENST00000563672 CABYRO75952 493 aa23.29■■□□□ 1.32
CMTM3-206ENST00000563672 CPT1AP50416 773 aa23.29■■□□□ 1.32
CMTM3-206ENST00000563672 ARHGAP1Q07960 439 aa23.29■■□□□ 1.32
CMTM3-206ENST00000563672 STK3Q13188 491 aa23.29■■□□□ 1.32
CMTM3-206ENST00000563672 PCNX4Q63HM2 1172 aa23.29■■□□□ 1.32
CMTM3-206ENST00000563672 KCNV1Q6PIU1 500 aa23.29■■□□□ 1.32
CMTM3-206ENST00000563672 INPP4AQ96PE3 977 aaPredicted RBP23.29■■□□□ 1.32
CMTM3-206ENST00000563672 SLC26A6Q9BXS9 759 aa23.29■■□□□ 1.32
CMTM3-206ENST00000563672 ZMYND8Q9ULU4 1186 aaPredicted RBP23.29■■□□□ 1.32
CMTM3-206ENST00000563672 MRVI1Q9Y6F6 885 aa23.29■■□□□ 1.32
CMTM3-206ENST00000563672 GH1P01241 217 aa23.28■■□□□ 1.32
CMTM3-206ENST00000563672 TGFB3P10600 412 aa23.28■■□□□ 1.32
CMTM3-206ENST00000563672 CDK7P50613 346 aa23.28■■□□□ 1.32
CMTM3-206ENST00000563672 ADCY7P51828 1080 aa23.28■■□□□ 1.32
CMTM3-206ENST00000563672 AKAP17AQ02040 695 aaKnown RBP23.28■■□□□ 1.32
CMTM3-206ENST00000563672 TLE2Q04725 743 aa23.28■■□□□ 1.32
CMTM3-206ENST00000563672 GLT8D2Q9H1C3 349 aa23.28■■□□□ 1.32
CMTM3-206ENST00000563672 PCDHA6Q9UN73 950 aa23.28■■□□□ 1.32
CMTM3-206ENST00000563672 PCDHA8Q9Y5H6 950 aa23.28■■□□□ 1.32
CMTM3-206ENST00000563672 ESYT2A0FGR8 921 aa23.27■■□□□ 1.32
CMTM3-206ENST00000563672 SPDYE3A6NKU9 549 aa23.27■■□□□ 1.32
CMTM3-206ENST00000563672 PFKFB2O60825 505 aa23.27■■□□□ 1.32
CMTM3-206ENST00000563672 PPFIA3O75145 1194 aa23.27■■□□□ 1.32
CMTM3-206ENST00000563672 ICAM3P32942 547 aa23.27■■□□□ 1.32
CMTM3-206ENST00000563672 NEK4P51957 841 aa23.27■■□□□ 1.32
CMTM3-206ENST00000563672 ANKRD33Q7Z3H0 272 aa23.27■■□□□ 1.32
CMTM3-206ENST00000563672 SLC43A3Q8NBI5 491 aa23.27■■□□□ 1.32
CMTM3-206ENST00000563672 EMID1Q96A84 441 aaPredicted RBP23.27■■□□□ 1.32
CMTM3-206ENST00000563672 VTI1AQ96AJ9 217 aa23.27■■□□□ 1.32
CMTM3-206ENST00000563672 ZMYND12Q9H0C1 365 aa23.27■■□□□ 1.32
CMTM3-206ENST00000563672 POLR3EQ9NVU0 708 aa23.27■■□□□ 1.32
CMTM3-206ENST00000563672 A0A0U1RQG5 324 aaPredicted RBP23.26■■□□□ 1.31
CMTM3-206ENST00000563672 ARVCFO00192 962 aa23.26■■□□□ 1.31
CMTM3-206ENST00000563672 CPLX1O14810 134 aa23.26■■□□□ 1.31
CMTM3-206ENST00000563672 SYN1P17600 705 aa23.26■■□□□ 1.31
CMTM3-206ENST00000563672 CLK2P49760 499 aaKnown RBP23.26■■□□□ 1.31
CMTM3-206ENST00000563672 PURAQ00577 322 aaKnown RBP23.26■■□□□ 1.31
CMTM3-206ENST00000563672 SP2Q02086 613 aa23.26■■□□□ 1.31
CMTM3-206ENST00000563672 SCRN1Q12765 414 aa23.26■■□□□ 1.31
CMTM3-206ENST00000563672 BRDTQ58F21 947 aaPredicted RBP23.26■■□□□ 1.31
CMTM3-206ENST00000563672 TOX2Q96NM4 488 aa23.26■■□□□ 1.31
CMTM3-206ENST00000563672 SLKQ9H2G2 1235 aaPredicted RBP23.26■■□□□ 1.31
CMTM3-206ENST00000563672 RTEL1Q9NZ71 1219 aa23.26■■□□□ 1.31
CMTM3-206ENST00000563672 SPATA31C2B4DYI2 1134 aa23.25■■□□□ 1.31
CMTM3-206ENST00000563672 FOSP01100 380 aaPredicted RBP23.25■■□□□ 1.31
CMTM3-206ENST00000563672 SSRP1Q08945 709 aaKnown RBP23.25■■□□□ 1.31
CMTM3-206ENST00000563672 LAMC2Q13753 1193 aa23.25■■□□□ 1.31
CMTM3-206ENST00000563672 GNPTABQ3T906 1256 aa23.25■■□□□ 1.31
CMTM3-206ENST00000563672 CPLX2Q6PUV4 134 aaKnown RBP23.25■■□□□ 1.31
CMTM3-206ENST00000563672 TRIM22Q8IYM9 498 aa23.25■■□□□ 1.31
CMTM3-206ENST00000563672 CCDC12Q8WUD4 166 aaPredicted RBP23.25■■□□□ 1.31
CMTM3-206ENST00000563672 AFG1LQ8WV93 481 aa23.25■■□□□ 1.31
CMTM3-206ENST00000563672 KIF2CQ99661 725 aa23.25■■□□□ 1.31
CMTM3-206ENST00000563672 GRIN2DO15399 1336 aa23.25■■□□□ 1.31
CMTM3-206ENST00000563672 KIAA1217Q5T5P2 1943 aa23.25■■□□□ 1.31
CMTM3-206ENST00000563672 KPNA6O60684 536 aa23.24■■□□□ 1.31
CMTM3-206ENST00000563672 MYL3P08590 195 aa23.24■■□□□ 1.31
CMTM3-206ENST00000563672 UBA1P22314 1058 aaKnown RBP23.24■■□□□ 1.31
CMTM3-206ENST00000563672 SEMA3FQ13275 785 aa23.24■■□□□ 1.31
CMTM3-206ENST00000563672 CELF3Q5SZQ8 465 aaKnown RBP23.24■■□□□ 1.31
CMTM3-206ENST00000563672 MYSM1Q5VVJ2 828 aa23.24■■□□□ 1.31
CMTM3-206ENST00000563672 DHX37Q8IY37 1157 aaKnown RBP23.24■■□□□ 1.31
CMTM3-206ENST00000563672 C22orf23Q9BZE7 217 aa23.24■■□□□ 1.31
CMTM3-206ENST00000563672 PRO3102Q9H379 93 aa23.24■■□□□ 1.31
CMTM3-206ENST00000563672 PDLIM7Q9NR12 457 aa23.24■■□□□ 1.31
CMTM3-206ENST00000563672 FIBPO43427 364 aa23.23■■□□□ 1.31
CMTM3-206ENST00000563672 PQBP1O60828 265 aaKnown RBP23.23■■□□□ 1.31
CMTM3-206ENST00000563672 MMP3P08254 477 aa23.23■■□□□ 1.31
CMTM3-206ENST00000563672 RBM25P49756 843 aaKnown RBP23.23■■□□□ 1.31
CMTM3-206ENST00000563672 AP3B2Q13367 1082 aa23.23■■□□□ 1.31
CMTM3-206ENST00000563672 ITGA7Q13683 1181 aa23.23■■□□□ 1.31
CMTM3-206ENST00000563672 GDF15Q99988 308 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms