RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 DDX11Q96FC9 970 aa5.43□□□□□ -1.54
HMGB1P33-201ENST00000563485 SYT3Q9BQG1 590 aa5.43□□□□□ -1.54
HMGB1P33-201ENST00000563485 SPATA25Q9BR10 227 aa5.43□□□□□ -1.54
HMGB1P33-201ENST00000563485 AP5M1Q9H0R1 490 aa5.43□□□□□ -1.54
HMGB1P33-201ENST00000563485 SH3D21A4FU49 640 aa5.42□□□□□ -1.54
HMGB1P33-201ENST00000563485 CPP00450 1065 aa5.42□□□□□ -1.54
HMGB1P33-201ENST00000563485 GRIA2P42262 883 aa5.42□□□□□ -1.54
HMGB1P33-201ENST00000563485 KCNC1P48547 511 aa5.42□□□□□ -1.54
HMGB1P33-201ENST00000563485 RBM10P98175 930 aaKnown RBP5.42□□□□□ -1.54
HMGB1P33-201ENST00000563485 ACBD5Q5T8D3 534 aaPredicted RBP5.42□□□□□ -1.54
HMGB1P33-201ENST00000563485 ANKS3Q6ZW76 656 aa5.42□□□□□ -1.54
HMGB1P33-201ENST00000563485 CEP68Q76N32 757 aa5.42□□□□□ -1.54
HMGB1P33-201ENST00000563485 Q8N1Y9 231 aa5.42□□□□□ -1.54
HMGB1P33-201ENST00000563485 SLC43A3Q8NBI5 491 aa5.42□□□□□ -1.54
HMGB1P33-201ENST00000563485 SEC14L1Q92503 715 aa5.42□□□□□ -1.54
HMGB1P33-201ENST00000563485 C1orf159Q96HA4 380 aa5.42□□□□□ -1.54
HMGB1P33-201ENST00000563485 A0A1W2PQU0 124 aa5.41□□□□□ -1.54
HMGB1P33-201ENST00000563485 MYO1BO43795 1136 aa5.41□□□□□ -1.54
HMGB1P33-201ENST00000563485 CAPNS1P04632 268 aa5.41□□□□□ -1.54
HMGB1P33-201ENST00000563485 SYN1P17600 705 aa5.41□□□□□ -1.54
HMGB1P33-201ENST00000563485 PPP2R2AP63151 447 aa5.41□□□□□ -1.54
HMGB1P33-201ENST00000563485 SMAD4Q13485 552 aaKnown RBP5.41□□□□□ -1.54
HMGB1P33-201ENST00000563485 TESK1Q15569 626 aa5.41□□□□□ -1.54
HMGB1P33-201ENST00000563485 MROH9Q5TGP6 573 aa5.41□□□□□ -1.54
HMGB1P33-201ENST00000563485 ETV3LQ6ZN32 361 aa5.41□□□□□ -1.54
HMGB1P33-201ENST00000563485 RIOX2Q8IUF8 465 aa5.41□□□□□ -1.54
HMGB1P33-201ENST00000563485 FAM26EQ8N5C1 309 aa5.41□□□□□ -1.54
HMGB1P33-201ENST00000563485 RCBTB1Q8NDN9 531 aa5.41□□□□□ -1.54
HMGB1P33-201ENST00000563485 CXorf38Q8TB03 319 aa5.41□□□□□ -1.54
HMGB1P33-201ENST00000563485 ZBTB8AQ96BR9 441 aa5.41□□□□□ -1.54
HMGB1P33-201ENST00000563485 TRMT2BQ96GJ1 504 aaKnown RBP5.41□□□□□ -1.54
HMGB1P33-201ENST00000563485 TMEM169Q96HH4 297 aa5.41□□□□□ -1.54
HMGB1P33-201ENST00000563485 CCDC140Q96MF4 163 aa5.41□□□□□ -1.54
HMGB1P33-201ENST00000563485 GMLQ99445 158 aa5.41□□□□□ -1.54
HMGB1P33-201ENST00000563485 GORASP1Q9BQQ3 440 aa5.41□□□□□ -1.54
HMGB1P33-201ENST00000563485 EPN3Q9H201 632 aa5.41□□□□□ -1.54
HMGB1P33-201ENST00000563485 IGSF5Q9NSI5 407 aa5.41□□□□□ -1.54
HMGB1P33-201ENST00000563485 SPATA6Q9NWH7 488 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P33-201ENST00000563485 PALD1Q9ULE6 856 aa5.41□□□□□ -1.54
HMGB1P33-201ENST00000563485 R3HCC1Q9Y3T6 440 aaKnown RBP5.41□□□□□ -1.54
HMGB1P33-201ENST00000563485 PCDHA2Q9Y5H9 948 aa5.41□□□□□ -1.54
HMGB1P33-201ENST00000563485 X6R8D5 127 aa5.41□□□□□ -1.54
HMGB1P33-201ENST00000563485 KLF4O43474 513 aa5.4□□□□□ -1.54
HMGB1P33-201ENST00000563485 CYP2C8P10632 490 aa5.4□□□□□ -1.54
HMGB1P33-201ENST00000563485 LTBRP36941 435 aa5.4□□□□□ -1.54
HMGB1P33-201ENST00000563485 SLC6A11P48066 632 aa5.4□□□□□ -1.54
HMGB1P33-201ENST00000563485 GTF2A2P52657 109 aa5.4□□□□□ -1.54
HMGB1P33-201ENST00000563485 DDR2Q16832 855 aa5.4□□□□□ -1.54
HMGB1P33-201ENST00000563485 SLC35F1Q5T1Q4 408 aa5.4□□□□□ -1.54
HMGB1P33-201ENST00000563485 NT5DC1Q5TFE4 455 aa5.4□□□□□ -1.54
HMGB1P33-201ENST00000563485 FRMD5Q7Z6J6 570 aa5.4□□□□□ -1.54
HMGB1P33-201ENST00000563485 MILR1Q7Z6M3 343 aa5.4□□□□□ -1.54
HMGB1P33-201ENST00000563485 MIB1Q86YT6 1006 aa5.4□□□□□ -1.54
HMGB1P33-201ENST00000563485 CARFQ8N187 725 aa5.4□□□□□ -1.54
HMGB1P33-201ENST00000563485 AGRPO00253 132 aa5.39□□□□□ -1.55
HMGB1P33-201ENST00000563485 CD300LDQ6UXZ3 194 aa5.39□□□□□ -1.55
HMGB1P33-201ENST00000563485 LINC00482Q8N8I6 264 aa5.39□□□□□ -1.55
HMGB1P33-201ENST00000563485 CHAMP1Q96JM3 812 aa5.39□□□□□ -1.55
HMGB1P33-201ENST00000563485 TEPSINQ96N21 525 aa5.39□□□□□ -1.55
HMGB1P33-201ENST00000563485 IER2Q9BTL4 223 aa5.39□□□□□ -1.55
HMGB1P33-201ENST00000563485 COA3Q9Y2R0 106 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P33-201ENST00000563485 PRICKLE3O43900 615 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P33-201ENST00000563485 STAT5AP42229 794 aa5.38□□□□□ -1.55
HMGB1P33-201ENST00000563485 SARSP49591 514 aaKnown RBP5.38□□□□□ -1.55
HMGB1P33-201ENST00000563485 MAP4K2Q12851 820 aa5.38□□□□□ -1.55
HMGB1P33-201ENST00000563485 LSAMPQ13449 338 aa5.38□□□□□ -1.55
HMGB1P33-201ENST00000563485 SKOR2Q2VWA4 1001 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P33-201ENST00000563485 STK32CQ86UX6 486 aa5.38□□□□□ -1.55
HMGB1P33-201ENST00000563485 FAM126BQ8IXS8 530 aa5.38□□□□□ -1.55
HMGB1P33-201ENST00000563485 KCTD13Q8WZ19 329 aa5.38□□□□□ -1.55
HMGB1P33-201ENST00000563485 C11orf84Q9BUA3 381 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P33-201ENST00000563485 USP40Q9NVE5 1235 aa5.38□□□□□ -1.55
HMGB1P33-201ENST00000563485 CLDND1Q9NY35 253 aa5.38□□□□□ -1.55
HMGB1P33-201ENST00000563485 NTMQ9P121 344 aa5.38□□□□□ -1.55
HMGB1P33-201ENST00000563485 NPFFR2Q9Y5X5 522 aa5.38□□□□□ -1.55
HMGB1P33-201ENST00000563485 H7BY64 318 aa5.37□□□□□ -1.55
HMGB1P33-201ENST00000563485 SMARCA5O60264 1052 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P33-201ENST00000563485 DLX3O60479 287 aa5.37□□□□□ -1.55
HMGB1P33-201ENST00000563485 THBS2P35442 1172 aa5.37□□□□□ -1.55
HMGB1P33-201ENST00000563485 ITGA1P56199 1179 aa5.37□□□□□ -1.55
HMGB1P33-201ENST00000563485 RTP5Q14D33 572 aa5.37□□□□□ -1.55
HMGB1P33-201ENST00000563485 TTLL7Q6ZT98 887 aa5.37□□□□□ -1.55
HMGB1P33-201ENST00000563485 ZNF652Q9Y2D9 606 aa5.37□□□□□ -1.55
HMGB1P33-201ENST00000563485 HGSO14964 777 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P33-201ENST00000563485 NOBOXO60393 691 aa5.36□□□□□ -1.55
HMGB1P33-201ENST00000563485 MSCO60682 206 aa5.36□□□□□ -1.55
HMGB1P33-201ENST00000563485 CR1LQ2VPA4 569 aa5.36□□□□□ -1.55
HMGB1P33-201ENST00000563485 STEAP3Q658P3 488 aa5.36□□□□□ -1.55
HMGB1P33-201ENST00000563485 USP53Q70EK8 1073 aa5.36□□□□□ -1.55
HMGB1P33-201ENST00000563485 FERMT3Q86UX7 667 aa5.36□□□□□ -1.55
HMGB1P33-201ENST00000563485 ZC3H18Q86VM9 953 aaKnown RBP5.36□□□□□ -1.55
HMGB1P33-201ENST00000563485 ZNF761Q86XN6 746 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P33-201ENST00000563485 KYQ8NBH2 561 aa5.36□□□□□ -1.55
HMGB1P33-201ENST00000563485 ARRDC4Q8NCT1 418 aa5.36□□□□□ -1.55
HMGB1P33-201ENST00000563485 KRTAP9-3Q9BYQ3 159 aa5.36□□□□□ -1.55
HMGB1P33-201ENST00000563485 CDIP1Q9H305 208 aa5.36□□□□□ -1.55
HMGB1P33-201ENST00000563485 PPARGC1AQ9UBK2 798 aaKnown RBP5.36□□□□□ -1.55
HMGB1P33-201ENST00000563485 PCDHB4Q9Y5E5 795 aa5.36□□□□□ -1.55
HMGB1P33-201ENST00000563485 DUSP10Q9Y6W6 482 aa5.36□□□□□ -1.55
HMGB1P33-201ENST00000563485 TCRBV5S2A0A599 114 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms