RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 IWS1Q96ST2 819 aa19.61■□□□□ 0.73
HDGFL3-203ENST00000563404 CERS4Q9HA82 394 aa19.61■□□□□ 0.73
HDGFL3-203ENST00000563404 DDX41Q9UJV9 622 aaKnown RBP19.61■□□□□ 0.73
HDGFL3-203ENST00000563404 MRPL11Q9Y3B7 192 aaKnown RBP19.61■□□□□ 0.73
HDGFL3-203ENST00000563404 HIP1O00291 1037 aa19.6■□□□□ 0.73
HDGFL3-203ENST00000563404 PPP1R11O60927 126 aaPredicted RBP19.6■□□□□ 0.73
HDGFL3-203ENST00000563404 ACTN1P12814 892 aa19.6■□□□□ 0.73
HDGFL3-203ENST00000563404 MRPS5P82675 430 aaKnown RBP19.6■□□□□ 0.73
HDGFL3-203ENST00000563404 BFSP2Q13515 415 aa19.6■□□□□ 0.73
HDGFL3-203ENST00000563404 MICALL1Q8N3F8 863 aa19.6■□□□□ 0.73
HDGFL3-203ENST00000563404 SLC9A7Q96T83 725 aa19.6■□□□□ 0.73
HDGFL3-203ENST00000563404 FTOQ9C0B1 505 aaKnown RBP eCLIP19.6■□□□□ 0.73
HDGFL3-203ENST00000563404 PXMP2Q9NR77 195 aa19.6■□□□□ 0.73
HDGFL3-203ENST00000563404 NOD1Q9Y239 953 aa19.6■□□□□ 0.73
HDGFL3-203ENST00000563404 KIAA1217Q5T5P2 1943 aa19.6■□□□□ 0.73
HDGFL3-203ENST00000563404 DHX16O60231 1041 aaKnown RBP19.59■□□□□ 0.73
HDGFL3-203ENST00000563404 SEC23AQ15436 765 aa19.59■□□□□ 0.73
HDGFL3-203ENST00000563404 SLC35G1Q2M3R5 365 aa19.59■□□□□ 0.73
HDGFL3-203ENST00000563404 ARHGEF16Q5VV41 709 aa19.59■□□□□ 0.73
HDGFL3-203ENST00000563404 CYB5R4Q7L1T6 521 aa19.59■□□□□ 0.73
HDGFL3-203ENST00000563404 SPRED2Q7Z698 418 aa19.59■□□□□ 0.73
HDGFL3-203ENST00000563404 HERC6Q8IVU3 1022 aa19.59■□□□□ 0.73
HDGFL3-203ENST00000563404 PHOSPHO2Q8TCD6 241 aa19.59■□□□□ 0.73
HDGFL3-203ENST00000563404 ADAMTS19Q8TE59 1207 aa19.59■□□□□ 0.73
HDGFL3-203ENST00000563404 MTMR8Q96EF0 704 aa19.59■□□□□ 0.73
HDGFL3-203ENST00000563404 YTHDC1Q96MU7 727 aaKnown RBP19.59■□□□□ 0.73
HDGFL3-203ENST00000563404 KRT23Q9C075 422 aa19.59■□□□□ 0.73
HDGFL3-203ENST00000563404 TRIP12Q14669 1992 aaPredicted RBP19.58■□□□□ 0.73
HDGFL3-203ENST00000563404 EIF3JO75822 258 aaKnown RBP19.58■□□□□ 0.72
HDGFL3-203ENST00000563404 RGS20O76081 388 aa19.58■□□□□ 0.72
HDGFL3-203ENST00000563404 CFBP00751 764 aa19.58■□□□□ 0.72
HDGFL3-203ENST00000563404 NR3C2P08235 984 aa19.58■□□□□ 0.72
HDGFL3-203ENST00000563404 HSD17B4P51659 736 aa19.58■□□□□ 0.72
HDGFL3-203ENST00000563404 GHRHRQ02643 423 aa19.58■□□□□ 0.72
HDGFL3-203ENST00000563404 TAP1Q03518 808 aa19.58■□□□□ 0.72
HDGFL3-203ENST00000563404 TCTN1Q2MV58 587 aa19.58■□□□□ 0.72
HDGFL3-203ENST00000563404 EMID1Q96A84 441 aaPredicted RBP19.58■□□□□ 0.72
HDGFL3-203ENST00000563404 HDAC6Q9UBN7 1215 aa19.58■□□□□ 0.72
HDGFL3-203ENST00000563404 GTF2IRD1Q9UHL9 959 aa19.58■□□□□ 0.72
HDGFL3-203ENST00000563404 CTNNA3Q9UI47 895 aa19.58■□□□□ 0.72
HDGFL3-203ENST00000563404 MAD2L2Q9UI95 211 aa19.58■□□□□ 0.72
HDGFL3-203ENST00000563404 MTCH2Q9Y6C9 303 aa19.58■□□□□ 0.72
HDGFL3-203ENST00000563404 PTPRSQ13332 1948 aa19.58■□□□□ 0.72
HDGFL3-203ENST00000563404 MYH6P13533 1939 aa19.57■□□□□ 0.72
HDGFL3-203ENST00000563404 POU3F3P20264 500 aaPredicted RBP19.57■□□□□ 0.72
HDGFL3-203ENST00000563404 CASTP20810 708 aaKnown RBP19.57■□□□□ 0.72
HDGFL3-203ENST00000563404 DGKDQ16760 1214 aa19.57■□□□□ 0.72
HDGFL3-203ENST00000563404 IFIT1BQ5T764 474 aaKnown RBP19.57■□□□□ 0.72
HDGFL3-203ENST00000563404 KRT40Q6A162 431 aa19.57■□□□□ 0.72
HDGFL3-203ENST00000563404 TMCO2Q7Z6W1 182 aaPredicted RBP19.57■□□□□ 0.72
HDGFL3-203ENST00000563404 CAGE1Q8TC20 777 aa19.57■□□□□ 0.72
HDGFL3-203ENST00000563404 AFAP1L1Q8TED9 768 aa19.57■□□□□ 0.72
HDGFL3-203ENST00000563404 UBAC1Q9BSL1 405 aa19.57■□□□□ 0.72
HDGFL3-203ENST00000563404 AMNQ9BXJ7 453 aa19.57■□□□□ 0.72
HDGFL3-203ENST00000563404 CNNM2Q9H8M5 875 aa19.57■□□□□ 0.72
HDGFL3-203ENST00000563404 KLRF2D3W0D1 207 aa19.56■□□□□ 0.72
HDGFL3-203ENST00000563404 HAS3O00219 553 aa19.56■□□□□ 0.72
HDGFL3-203ENST00000563404 BAIAP3O94812 1187 aa19.56■□□□□ 0.72
HDGFL3-203ENST00000563404 ZNF286BP0CG31 522 aa19.56■□□□□ 0.72
HDGFL3-203ENST00000563404 GSPT1P15170 499 aaKnown RBP19.56■□□□□ 0.72
HDGFL3-203ENST00000563404 SELPP16109 830 aa19.56■□□□□ 0.72
HDGFL3-203ENST00000563404 PDE4AP27815 886 aa19.56■□□□□ 0.72
HDGFL3-203ENST00000563404 PSEN2P49810 448 aa19.56■□□□□ 0.72
HDGFL3-203ENST00000563404 TFF2Q03403 129 aa19.56■□□□□ 0.72
HDGFL3-203ENST00000563404 RBL2Q08999 1139 aa19.56■□□□□ 0.72
HDGFL3-203ENST00000563404 HIC1Q14526 733 aa19.56■□□□□ 0.72
HDGFL3-203ENST00000563404 WNT8BQ93098 351 aa19.56■□□□□ 0.72
HDGFL3-203ENST00000563404 PDCD2LQ9BRP1 358 aa19.56■□□□□ 0.72
HDGFL3-203ENST00000563404 ALG1Q9BT22 464 aa19.56■□□□□ 0.72
HDGFL3-203ENST00000563404 MRVI1Q9Y6F6 885 aa19.56■□□□□ 0.72
HDGFL3-203ENST00000563404 PRRC2BQ5JSZ5 2229 aaKnown RBP19.56■□□□□ 0.72
HDGFL3-203ENST00000563404 PALM3A6NDB9 673 aaPredicted RBP19.55■□□□□ 0.72
HDGFL3-203ENST00000563404 NBNO60934 754 aa19.55■□□□□ 0.72
HDGFL3-203ENST00000563404 CXCL10P02778 98 aa19.55■□□□□ 0.72
HDGFL3-203ENST00000563404 CKBP12277 381 aa19.55■□□□□ 0.72
HDGFL3-203ENST00000563404 WDR5P61964 334 aaKnown RBP19.55■□□□□ 0.72
HDGFL3-203ENST00000563404 ZNF200P98182 395 aaPredicted RBP19.55■□□□□ 0.72
HDGFL3-203ENST00000563404 TRIM71Q2Q1W2 868 aaKnown RBP19.55■□□□□ 0.72
HDGFL3-203ENST00000563404 TRAF7Q6Q0C0 670 aa19.55■□□□□ 0.72
HDGFL3-203ENST00000563404 STOX1Q6ZVD7 989 aa19.55■□□□□ 0.72
HDGFL3-203ENST00000563404 LRRC8DQ7L1W4 858 aa19.55■□□□□ 0.72
HDGFL3-203ENST00000563404 CCDC155Q8N6L0 562 aa19.55■□□□□ 0.72
HDGFL3-203ENST00000563404 IL31RAQ8NI17 732 aa19.55■□□□□ 0.72
HDGFL3-203ENST00000563404 PPTC7Q8NI37 304 aa19.55■□□□□ 0.72
HDGFL3-203ENST00000563404 ARNTL2Q8WYA1 636 aa19.55■□□□□ 0.72
HDGFL3-203ENST00000563404 UHRF1Q96T88 793 aaPredicted RBP19.55■□□□□ 0.72
HDGFL3-203ENST00000563404 SENP2Q9HC62 589 aa19.55■□□□□ 0.72
HDGFL3-203ENST00000563404 LCHNA4D1U4 455 aa19.54■□□□□ 0.72
HDGFL3-203ENST00000563404 ZBTB5O15062 677 aa19.54■□□□□ 0.72
HDGFL3-203ENST00000563404 SORBS3O60504 671 aa19.54■□□□□ 0.72
HDGFL3-203ENST00000563404 F2P00734 622 aa19.54■□□□□ 0.72
HDGFL3-203ENST00000563404 MYCLP12524 364 aaPredicted RBP19.54■□□□□ 0.72
HDGFL3-203ENST00000563404 HOXD8P13378 290 aaPredicted RBP19.54■□□□□ 0.72
HDGFL3-203ENST00000563404 BMP1P13497 986 aa19.54■□□□□ 0.72
HDGFL3-203ENST00000563404 HOXA13P31271 388 aaPredicted RBP19.54■□□□□ 0.72
HDGFL3-203ENST00000563404 DEFB103AP81534 67 aa19.54■□□□□ 0.72
HDGFL3-203ENST00000563404 LAMC2Q13753 1193 aa19.54■□□□□ 0.72
HDGFL3-203ENST00000563404 MFSD10Q14728 455 aa19.54■□□□□ 0.72
HDGFL3-203ENST00000563404 KIAA0753Q2KHM9 967 aa19.54■□□□□ 0.72
HDGFL3-203ENST00000563404 DHX37Q8IY37 1157 aaKnown RBP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms