RNA–Protein interactions for RNA: ENST00000563273.5

NSMCE1-204, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-204ENST00000563273 CCND2P30279 289 aa14.11□□□□□ -0.15
NSMCE1-204ENST00000563273 HOXA13P31271 388 aaPredicted RBP14.11□□□□□ -0.15
NSMCE1-204ENST00000563273 HSPA4P34932 840 aa14.11□□□□□ -0.15
NSMCE1-204ENST00000563273 PPIGQ13427 754 aaKnown RBP eCLIP14.11□□□□□ -0.15
NSMCE1-204ENST00000563273 LAMC2Q13753 1193 aa14.11□□□□□ -0.15
NSMCE1-204ENST00000563273 SHHQ15465 462 aa14.11□□□□□ -0.15
NSMCE1-204ENST00000563273 ADCK5Q3MIX3 580 aa14.11□□□□□ -0.15
NSMCE1-204ENST00000563273 XRRA1Q6P2D8 792 aa14.11□□□□□ -0.15
NSMCE1-204ENST00000563273 NFRKBQ6P4R8 1299 aa14.11□□□□□ -0.15
NSMCE1-204ENST00000563273 SEPT14Q6ZU15 432 aa14.11□□□□□ -0.15
NSMCE1-204ENST00000563273 COPS5Q92905 334 aa14.11□□□□□ -0.15
NSMCE1-204ENST00000563273 ALDH8A1Q9H2A2 487 aaPredicted RBP14.11□□□□□ -0.15
NSMCE1-204ENST00000563273 RGS20O76081 388 aa14.1□□□□□ -0.15
NSMCE1-204ENST00000563273 MYL3P08590 195 aa14.1□□□□□ -0.15
NSMCE1-204ENST00000563273 LY6KQ17RY6 165 aa14.1□□□□□ -0.15
NSMCE1-204ENST00000563273 SESTD1Q86VW0 696 aa14.1□□□□□ -0.15
NSMCE1-204ENST00000563273 TMEM199Q8N511 208 aa14.1□□□□□ -0.15
NSMCE1-204ENST00000563273 PPTC7Q8NI37 304 aa14.1□□□□□ -0.15
NSMCE1-204ENST00000563273 CUL5Q93034 780 aa14.1□□□□□ -0.15
NSMCE1-204ENST00000563273 LRRC2Q9BYS8 371 aa14.1□□□□□ -0.15
NSMCE1-204ENST00000563273 MRVI1Q9Y6F6 885 aa14.1□□□□□ -0.15
NSMCE1-204ENST00000563273 MEIS2O14770 477 aa14.09□□□□□ -0.15
NSMCE1-204ENST00000563273 B4GALT4O60513 344 aa14.09□□□□□ -0.15
NSMCE1-204ENST00000563273 MMP3P08254 477 aa14.09□□□□□ -0.15
NSMCE1-204ENST00000563273 ICAM3P32942 547 aa14.09□□□□□ -0.15
NSMCE1-204ENST00000563273 PSMC6P62333 389 aa14.09□□□□□ -0.15
NSMCE1-204ENST00000563273 SMAD3P84022 425 aaKnown RBP14.09□□□□□ -0.15
NSMCE1-204ENST00000563273 DGKDQ16760 1214 aa14.09□□□□□ -0.15
NSMCE1-204ENST00000563273 GNPTABQ3T906 1256 aa14.09□□□□□ -0.15
NSMCE1-204ENST00000563273 C9orf50Q5SZB4 431 aa14.09□□□□□ -0.15
NSMCE1-204ENST00000563273 MICU3Q86XE3 530 aa14.09□□□□□ -0.15
NSMCE1-204ENST00000563273 IL31RAQ8NI17 732 aa14.09□□□□□ -0.15
NSMCE1-204ENST00000563273 AFG1LQ8WV93 481 aa14.09□□□□□ -0.15
NSMCE1-204ENST00000563273 INPP4AQ96PE3 977 aaPredicted RBP14.09□□□□□ -0.15
NSMCE1-204ENST00000563273 NOC4LQ9BVI4 516 aaKnown RBP14.09□□□□□ -0.15
NSMCE1-204ENST00000563273 HIPK3Q9H422 1215 aa14.09□□□□□ -0.15
NSMCE1-204ENST00000563273 PPP4R2Q9NY27 417 aa14.09□□□□□ -0.15
NSMCE1-204ENST00000563273 LAMA2P24043 3122 aaKnown RBP14.08□□□□□ -0.16
NSMCE1-204ENST00000563273 hCG_1984214I3L0E3 225 aa14.08□□□□□ -0.16
NSMCE1-204ENST00000563273 ZBTB43O43298 467 aa14.08□□□□□ -0.16
NSMCE1-204ENST00000563273 MYCLP12524 364 aaPredicted RBP14.08□□□□□ -0.16
NSMCE1-204ENST00000563273 RXRAP19793 462 aa14.08□□□□□ -0.16
NSMCE1-204ENST00000563273 CASTP20810 708 aaKnown RBP14.08□□□□□ -0.16
NSMCE1-204ENST00000563273 EPHB4P54760 987 aa14.08□□□□□ -0.16
NSMCE1-204ENST00000563273 FUT2Q10981 343 aa14.08□□□□□ -0.16
NSMCE1-204ENST00000563273 RTN1Q16799 776 aa14.08□□□□□ -0.16
NSMCE1-204ENST00000563273 NBPF20Q3BBV1 942 aa14.08□□□□□ -0.16
NSMCE1-204ENST00000563273 CELF3Q5SZQ8 465 aaKnown RBP14.08□□□□□ -0.16
NSMCE1-204ENST00000563273 PCNX4Q63HM2 1172 aa14.08□□□□□ -0.16
NSMCE1-204ENST00000563273 PPP1R18Q6NYC8 613 aa14.08□□□□□ -0.16
NSMCE1-204ENST00000563273 FCHSD1Q86WN1 690 aa14.08□□□□□ -0.16
NSMCE1-204ENST00000563273 ZNF713Q8N859 430 aaPredicted RBP14.08□□□□□ -0.16
NSMCE1-204ENST00000563273 KATNAL1Q9BW62 490 aa14.08□□□□□ -0.16
NSMCE1-204ENST00000563273 AGXT2Q9BYV1 514 aa14.08□□□□□ -0.16
NSMCE1-204ENST00000563273 TRPV6Q9H1D0 765 aa14.08□□□□□ -0.16
NSMCE1-204ENST00000563273 PSTPIP2Q9H939 334 aa14.08□□□□□ -0.16
NSMCE1-204ENST00000563273 SNX14Q9Y5W7 946 aa14.08□□□□□ -0.16
NSMCE1-204ENST00000563273 NID2Q14112 1375 aa14.08□□□□□ -0.16
NSMCE1-204ENST00000563273 CCDC196A0A1B0GTZ2 297 aa14.07□□□□□ -0.16
NSMCE1-204ENST00000563273 PPFIA4O75335 1185 aa14.07□□□□□ -0.16
NSMCE1-204ENST00000563273 F2P00734 622 aa14.07□□□□□ -0.16
NSMCE1-204ENST00000563273 PSMA5P28066 241 aa14.07□□□□□ -0.16
NSMCE1-204ENST00000563273 MRPS9P82933 396 aaKnown RBP14.07□□□□□ -0.16
NSMCE1-204ENST00000563273 RASIP1Q5U651 963 aa14.07□□□□□ -0.16
NSMCE1-204ENST00000563273 MYSM1Q5VVJ2 828 aa14.07□□□□□ -0.16
NSMCE1-204ENST00000563273 PSRC1Q6PGN9 363 aaPredicted RBP14.07□□□□□ -0.16
NSMCE1-204ENST00000563273 BLOC1S2Q6QNY1 142 aa14.07□□□□□ -0.16
NSMCE1-204ENST00000563273 DHX37Q8IY37 1157 aaKnown RBP14.07□□□□□ -0.16
NSMCE1-204ENST00000563273 SMARCC2Q8TAQ2 1214 aa14.07□□□□□ -0.16
NSMCE1-204ENST00000563273 PIBF1Q8WXW3 757 aa14.07□□□□□ -0.16
NSMCE1-204ENST00000563273 RNPC3Q96LT9 517 aaKnown RBP14.07□□□□□ -0.16
NSMCE1-204ENST00000563273 IL23AQ9NPF7 189 aa14.07□□□□□ -0.16
NSMCE1-204ENST00000563273 BRPF3Q9ULD4 1205 aa14.07□□□□□ -0.16
NSMCE1-204ENST00000563273 CNTNAP5Q8WYK1 1306 aa14.07□□□□□ -0.16
NSMCE1-204ENST00000563273 TMEM265A0A087WTH1 108 aa14.06□□□□□ -0.16
NSMCE1-204ENST00000563273 SPATA31C2B4DYI2 1134 aa14.06□□□□□ -0.16
NSMCE1-204ENST00000563273 PITPNM1O00562 1244 aa14.06□□□□□ -0.16
NSMCE1-204ENST00000563273 FIBPO43427 364 aa14.06□□□□□ -0.16
NSMCE1-204ENST00000563273 PFKMP08237 780 aa14.06□□□□□ -0.16
NSMCE1-204ENST00000563273 CSF2RAP15509 400 aa14.06□□□□□ -0.16
NSMCE1-204ENST00000563273 UBA1P22314 1058 aaKnown RBP14.06□□□□□ -0.16
NSMCE1-204ENST00000563273 TMEM240Q5SV17 173 aa14.06□□□□□ -0.16
NSMCE1-204ENST00000563273 USP17L6PQ6QN14 398 aa14.06□□□□□ -0.16
NSMCE1-204ENST00000563273 CMTR1Q8N1G2 835 aaKnown RBP14.06□□□□□ -0.16
NSMCE1-204ENST00000563273 DEFB123Q8N688 67 aa14.06□□□□□ -0.16
NSMCE1-204ENST00000563273 KAT2BQ92831 832 aa14.06□□□□□ -0.16
NSMCE1-204ENST00000563273 JAKMIP1Q96N16 626 aaKnown RBP14.06□□□□□ -0.16
NSMCE1-204ENST00000563273 SENP7Q9BQF6 1050 aa14.06□□□□□ -0.16
NSMCE1-204ENST00000563273 PPP1R12CQ9BZL4 782 aa14.06□□□□□ -0.16
NSMCE1-204ENST00000563273 GLT8D2Q9H1C3 349 aa14.06□□□□□ -0.16
NSMCE1-204ENST00000563273 FAM217BQ9NTX9 383 aaPredicted RBP14.06□□□□□ -0.16
NSMCE1-204ENST00000563273 TRMT13Q9NUP7 481 aaKnown RBP14.06□□□□□ -0.16
NSMCE1-204ENST00000563273 SCN10AQ9Y5Y9 1956 aa14.05□□□□□ -0.16
NSMCE1-204ENST00000563273 KLF18A0A0U1RQI7 1052 aa14.05□□□□□ -0.16
NSMCE1-204ENST00000563273 GOLGA8AA7E2F4 631 aa14.05□□□□□ -0.16
NSMCE1-204ENST00000563273 GOLGA8BA8MQT2 603 aa14.05□□□□□ -0.16
NSMCE1-204ENST00000563273 HAS3O00219 553 aa14.05□□□□□ -0.16
NSMCE1-204ENST00000563273 GGPS1O95749 300 aa14.05□□□□□ -0.16
NSMCE1-204ENST00000563273 RPS6KB1P23443 525 aa14.05□□□□□ -0.16
NSMCE1-204ENST00000563273 CYP2C18P33260 490 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms