RNA–Protein interactions for RNA: ENST00000562543.5

TCF4-213, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-213ENST00000562543 GDPD5Q8WTR4 605 aa7.65□□□□□ -1.18
TCF4-213ENST00000562543 SIN3AQ96ST3 1273 aa7.65□□□□□ -1.18
TCF4-213ENST00000562543 MIS18AQ9NYP9 233 aa7.65□□□□□ -1.18
TCF4-213ENST00000562543 SLC6A14Q9UN76 642 aa7.65□□□□□ -1.18
TCF4-213ENST00000562543 TTF2Q9UNY4 1162 aaKnown RBP7.65□□□□□ -1.18
TCF4-213ENST00000562543 SLC4A7Q9Y6M7 1214 aa7.65□□□□□ -1.18
TCF4-213ENST00000562543 TNKSO95271 1327 aa7.64□□□□□ -1.19
TCF4-213ENST00000562543 TEP1Q99973 2627 aaKnown RBP7.64□□□□□ -1.19
TCF4-213ENST00000562543 C9orf172C9J069 976 aa7.64□□□□□ -1.19
TCF4-213ENST00000562543 DKK1O94907 266 aa7.64□□□□□ -1.19
TCF4-213ENST00000562543 TAF7Q15545 349 aaPredicted RBP7.64□□□□□ -1.19
TCF4-213ENST00000562543 BTLAQ7Z6A9 289 aa7.64□□□□□ -1.19
TCF4-213ENST00000562543 MORC1Q86VD1 984 aa7.64□□□□□ -1.19
TCF4-213ENST00000562543 DMRTC2Q8IXT2 367 aaPredicted RBP7.64□□□□□ -1.19
TCF4-213ENST00000562543 SCYL3Q8IZE3 742 aa7.64□□□□□ -1.19
TCF4-213ENST00000562543 ASCC2Q9H1I8 757 aaPredicted RBP7.64□□□□□ -1.19
TCF4-213ENST00000562543 TXNRD2Q9NNW7 524 aa7.64□□□□□ -1.19
TCF4-213ENST00000562543 NAGPAQ9UK23 515 aa7.64□□□□□ -1.19
TCF4-213ENST00000562543 CHMP3Q9Y3E7 222 aa7.64□□□□□ -1.19
TCF4-213ENST00000562543 MYH3P11055 1940 aa7.64□□□□□ -1.19
TCF4-213ENST00000562543 RALGAPA2Q2PPJ7 1873 aa7.64□□□□□ -1.19
TCF4-213ENST00000562543 COL11A1P12107 1806 aaPredicted RBP7.64□□□□□ -1.19
TCF4-213ENST00000562543 SIP14410 1827 aa7.64□□□□□ -1.19
TCF4-213ENST00000562543 TRIM75PA6NK02 468 aa7.63□□□□□ -1.19
TCF4-213ENST00000562543 SEPT4O43236 478 aa7.63□□□□□ -1.19
TCF4-213ENST00000562543 PEX10O60683 326 aa7.63□□□□□ -1.19
TCF4-213ENST00000562543 CYP2C19P33261 490 aa7.63□□□□□ -1.19
TCF4-213ENST00000562543 ATP1A2P50993 1020 aa7.63□□□□□ -1.19
TCF4-213ENST00000562543 AFF1P51825 1210 aaKnown RBP7.63□□□□□ -1.19
TCF4-213ENST00000562543 ATXN1P54253 815 aaKnown RBP7.63□□□□□ -1.19
TCF4-213ENST00000562543 DCTN1Q14203 1278 aa7.63□□□□□ -1.19
TCF4-213ENST00000562543 SMAD2Q15796 467 aaKnown RBP7.63□□□□□ -1.19
TCF4-213ENST00000562543 FAM47AQ5JRC9 791 aa7.63□□□□□ -1.19
TCF4-213ENST00000562543 PSAPL1Q6NUJ1 521 aa7.63□□□□□ -1.19
TCF4-213ENST00000562543 PLEKHH3Q7Z736 793 aa7.63□□□□□ -1.19
TCF4-213ENST00000562543 PLEKHM2Q8IWE5 1019 aa7.63□□□□□ -1.19
TCF4-213ENST00000562543 CRACR2BQ8N4Y2 399 aaPredicted RBP7.63□□□□□ -1.19
TCF4-213ENST00000562543 XAGE3Q8WTP9 111 aa7.63□□□□□ -1.19
TCF4-213ENST00000562543 EDC3Q96F86 508 aaKnown RBP7.63□□□□□ -1.19
TCF4-213ENST00000562543 PHACTR3Q96KR7 559 aa7.63□□□□□ -1.19
TCF4-213ENST00000562543 PORCNQ9H237 461 aa7.63□□□□□ -1.19
TCF4-213ENST00000562543 DNAJB12Q9NXW2 375 aaKnown RBP7.63□□□□□ -1.19
TCF4-213ENST00000562543 DIAPH1O60610 1272 aaKnown RBP7.62□□□□□ -1.19
TCF4-213ENST00000562543 HOXC6P09630 235 aa7.62□□□□□ -1.19
TCF4-213ENST00000562543 NRG1Q02297 640 aaPredicted RBP7.62□□□□□ -1.19
TCF4-213ENST00000562543 AIMP1Q12904 312 aaKnown RBP7.62□□□□□ -1.19
TCF4-213ENST00000562543 COL19A1Q14993 1142 aa7.62□□□□□ -1.19
TCF4-213ENST00000562543 GPRC5AQ8NFJ5 357 aa7.62□□□□□ -1.19
TCF4-213ENST00000562543 SCG3Q8WXD2 468 aaKnown RBP7.62□□□□□ -1.19
TCF4-213ENST00000562543 TP53INP1Q96A56 240 aa7.62□□□□□ -1.19
TCF4-213ENST00000562543 CDC5LQ99459 802 aaKnown RBP7.62□□□□□ -1.19
TCF4-213ENST00000562543 PPP1R12CQ9BZL4 782 aa7.62□□□□□ -1.19
TCF4-213ENST00000562543 GSX2Q9BZM3 304 aa7.62□□□□□ -1.19
TCF4-213ENST00000562543 PICK1Q9NRD5 415 aa7.62□□□□□ -1.19
TCF4-213ENST00000562543 PTPRSQ13332 1948 aa7.62□□□□□ -1.19
TCF4-213ENST00000562543 ZNF236Q9UL36 1845 aa7.62□□□□□ -1.19
TCF4-213ENST00000562543 ANKRD17O75179 2603 aaKnown RBP7.61□□□□□ -1.19
TCF4-213ENST00000562543 PALM3A6NDB9 673 aaPredicted RBP7.61□□□□□ -1.19
TCF4-213ENST00000562543 ATP9BO43861 1147 aa7.61□□□□□ -1.19
TCF4-213ENST00000562543 PDGFBP01127 241 aaPredicted RBP7.61□□□□□ -1.19
TCF4-213ENST00000562543 LMNAP02545 664 aaKnown RBP7.61□□□□□ -1.19
TCF4-213ENST00000562543 HSP90B1P14625 803 aaKnown RBP7.61□□□□□ -1.19
TCF4-213ENST00000562543 PABPC4Q13310 644 aaKnown RBP eCLIP7.61□□□□□ -1.19
TCF4-213ENST00000562543 MFSD14BQ5SR56 506 aa7.61□□□□□ -1.19
TCF4-213ENST00000562543 LRSAM1Q6UWE0 723 aa7.61□□□□□ -1.19
TCF4-213ENST00000562543 C15orf52Q6ZUT6 534 aaKnown RBP7.61□□□□□ -1.19
TCF4-213ENST00000562543 TMEM105Q8N8V8 129 aa7.61□□□□□ -1.19
TCF4-213ENST00000562543 RTF1Q92541 710 aaKnown RBP7.61□□□□□ -1.19
TCF4-213ENST00000562543 LENG1Q96BZ8 264 aaPredicted RBP7.61□□□□□ -1.19
TCF4-213ENST00000562543 HNRNPABQ99729 332 aaKnown RBP7.61□□□□□ -1.19
TCF4-213ENST00000562543 C2orf49Q9BVC5 232 aaPredicted RBP7.61□□□□□ -1.19
TCF4-213ENST00000562543 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.61□□□□□ -1.19
TCF4-213ENST00000562543 TMOD2Q9NZR1 351 aa7.61□□□□□ -1.19
TCF4-213ENST00000562543 DBF4Q9UBU7 674 aaPredicted RBP7.61□□□□□ -1.19
TCF4-213ENST00000562543 SMCHD1A6NHR9 2005 aa7.61□□□□□ -1.19
TCF4-213ENST00000562543 MROH7Q68CQ1 1323 aa7.6□□□□□ -1.19
TCF4-213ENST00000562543 PDE8AO60658 829 aa7.6□□□□□ -1.19
TCF4-213ENST00000562543 NFKB1P19838 968 aa7.6□□□□□ -1.19
TCF4-213ENST00000562543 SDHBP21912 280 aa7.6□□□□□ -1.19
TCF4-213ENST00000562543 CYP2C18P33260 490 aa7.6□□□□□ -1.19
TCF4-213ENST00000562543 ERVK-24P63145 666 aa7.6□□□□□ -1.19
TCF4-213ENST00000562543 ATP2B2Q01814 1243 aa7.6□□□□□ -1.19
TCF4-213ENST00000562543 PLAURQ03405 335 aa7.6□□□□□ -1.19
TCF4-213ENST00000562543 PRR23BQ6ZRT6 265 aa7.6□□□□□ -1.19
TCF4-213ENST00000562543 KRTAP1-3Q8IUG1 177 aa7.6□□□□□ -1.19
TCF4-213ENST00000562543 WWC1Q8IX03 1113 aa7.6□□□□□ -1.19
TCF4-213ENST00000562543 NPLOC4Q8TAT6 608 aa7.6□□□□□ -1.19
TCF4-213ENST00000562543 VWCEQ96DN2 955 aa7.6□□□□□ -1.19
TCF4-213ENST00000562543 PABPC5Q96DU9 382 aaKnown RBP7.6□□□□□ -1.19
TCF4-213ENST00000562543 DSPP15924 2871 aaKnown RBP7.6□□□□□ -1.19
TCF4-213ENST00000562543 ITPR1Q14643 2758 aa7.59□□□□□ -1.19
TCF4-213ENST00000562543 IGF2RP11717 2491 aa7.59□□□□□ -1.19
TCF4-213ENST00000562543 LAMA5O15230 3695 aa7.59□□□□□ -1.19
TCF4-213ENST00000562543 M0R2N6 131 aa7.59□□□□□ -1.19
TCF4-213ENST00000562543 TAF4O00268 1085 aa7.59□□□□□ -1.19
TCF4-213ENST00000562543 HYAL3O43820 417 aaPredicted RBP7.59□□□□□ -1.19
TCF4-213ENST00000562543 PROS1P07225 676 aa7.59□□□□□ -1.19
TCF4-213ENST00000562543 H2AFB1P0C5Y9 115 aa7.59□□□□□ -1.19
TCF4-213ENST00000562543 H2AFB2P0C5Z0 115 aa7.59□□□□□ -1.19
TCF4-213ENST00000562543 GRNP28799 593 aaKnown RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms