RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 INF2Q27J81 1249 aa13.07□□□□□ -0.32
PCAT1-202ENST00000561978 PDXDC2PQ6P474 469 aa13.07□□□□□ -0.32
PCAT1-202ENST00000561978 CTAGE1Q96RT6 745 aa13.07□□□□□ -0.32
PCAT1-202ENST00000561978 COLQQ9Y215 455 aaPredicted RBP13.07□□□□□ -0.32
PCAT1-202ENST00000561978 PTPRFP10586 1907 aa13.07□□□□□ -0.32
PCAT1-202ENST00000561978 USP17L5A8MUK1 530 aa13.07□□□□□ -0.32
PCAT1-202ENST00000561978 SNHG28P0DPA3 235 aa13.07□□□□□ -0.32
PCAT1-202ENST00000561978 UBA7P41226 1012 aa13.07□□□□□ -0.32
PCAT1-202ENST00000561978 SPP2Q13103 211 aa13.07□□□□□ -0.32
PCAT1-202ENST00000561978 PPIL2Q13356 520 aa13.07□□□□□ -0.32
PCAT1-202ENST00000561978 SEPT2Q15019 361 aa13.07□□□□□ -0.32
PCAT1-202ENST00000561978 PTPN14Q15678 1187 aa13.07□□□□□ -0.32
PCAT1-202ENST00000561978 ARMCX5Q6P1M9 558 aa13.07□□□□□ -0.32
PCAT1-202ENST00000561978 RASGRP4Q8TDF6 673 aa13.07□□□□□ -0.32
PCAT1-202ENST00000561978 MS4A4AQ96JQ5 239 aa13.07□□□□□ -0.32
PCAT1-202ENST00000561978 CCSER1Q9C0I3 900 aa13.07□□□□□ -0.32
PCAT1-202ENST00000561978 CUEDC2Q9H467 287 aa13.07□□□□□ -0.32
PCAT1-202ENST00000561978 MAGEF1Q9HAY2 307 aa13.07□□□□□ -0.32
PCAT1-202ENST00000561978 AFG3L2Q9Y4W6 797 aa13.07□□□□□ -0.32
PCAT1-202ENST00000561978 BRCA2P51587 3418 aa13.06□□□□□ -0.32
PCAT1-202ENST00000561978 ADAMTS3O15072 1205 aa13.06□□□□□ -0.32
PCAT1-202ENST00000561978 STAT6P42226 847 aa13.06□□□□□ -0.32
PCAT1-202ENST00000561978 GPATCH4Q5T3I0 446 aaKnown RBP13.06□□□□□ -0.32
PCAT1-202ENST00000561978 RRAGBQ5VZM2 374 aa13.06□□□□□ -0.32
PCAT1-202ENST00000561978 NEK8Q86SG6 692 aa13.06□□□□□ -0.32
PCAT1-202ENST00000561978 HOMER1Q86YM7 354 aa13.06□□□□□ -0.32
PCAT1-202ENST00000561978 CCAR2Q8N163 923 aaKnown RBP13.06□□□□□ -0.32
PCAT1-202ENST00000561978 C16orf45Q96MC5 204 aaPredicted RBP13.06□□□□□ -0.32
PCAT1-202ENST00000561978 PIGSQ96S52 555 aa13.06□□□□□ -0.32
PCAT1-202ENST00000561978 VAT1LQ9HCJ6 419 aa13.06□□□□□ -0.32
PCAT1-202ENST00000561978 DISC1Q9NRI5 854 aa13.06□□□□□ -0.32
PCAT1-202ENST00000561978 KCNG1Q9UIX4 513 aa13.06□□□□□ -0.32
PCAT1-202ENST00000561978 CCL15-CCL14A0A0B4J2E2 113 aa13.05□□□□□ -0.32
PCAT1-202ENST00000561978 CUL4BQ13620 913 aa13.05□□□□□ -0.32
PCAT1-202ENST00000561978 CCL15Q16663 113 aa13.05□□□□□ -0.32
PCAT1-202ENST00000561978 PPP1R18Q6NYC8 613 aa13.05□□□□□ -0.32
PCAT1-202ENST00000561978 MTERF4Q7Z6M4 381 aaKnown RBP13.05□□□□□ -0.32
PCAT1-202ENST00000561978 REXO1Q8N1G1 1221 aaKnown RBP13.05□□□□□ -0.32
PCAT1-202ENST00000561978 MAP7D2Q96T17 732 aa13.05□□□□□ -0.32
PCAT1-202ENST00000561978 PTPN18Q99952 460 aa13.05□□□□□ -0.32
PCAT1-202ENST00000561978 GTPBP4Q9BZE4 634 aaKnown RBP13.05□□□□□ -0.32
PCAT1-202ENST00000561978 PPP1R3GB7ZBB8 358 aa13.05□□□□□ -0.32
PCAT1-202ENST00000561978 IGF2BP3O00425 579 aaKnown RBP eCLIP13.05□□□□□ -0.32
PCAT1-202ENST00000561978 GTF2A2P52657 109 aa13.05□□□□□ -0.32
PCAT1-202ENST00000561978 SNAPC2Q13487 334 aa13.05□□□□□ -0.32
PCAT1-202ENST00000561978 MTMR2Q13614 643 aa13.05□□□□□ -0.32
PCAT1-202ENST00000561978 ZYXQ15942 572 aaKnown RBP13.05□□□□□ -0.32
PCAT1-202ENST00000561978 FILIP1LQ4L180 1135 aa13.05□□□□□ -0.32
PCAT1-202ENST00000561978 ZNF658Q5TYW1 1059 aaPredicted RBP13.05□□□□□ -0.32
PCAT1-202ENST00000561978 CEP135Q66GS9 1140 aa13.05□□□□□ -0.32
PCAT1-202ENST00000561978 SPECC1LQ69YQ0 1117 aa13.05□□□□□ -0.32
PCAT1-202ENST00000561978 ZNF280CQ8ND82 737 aa13.05□□□□□ -0.32
PCAT1-202ENST00000561978 RASSF8Q8NHQ8 419 aa13.05□□□□□ -0.32
PCAT1-202ENST00000561978 BRI3BPQ8WY22 251 aa13.05□□□□□ -0.32
PCAT1-202ENST00000561978 SYNRGQ9UMZ2 1314 aa13.05□□□□□ -0.32
PCAT1-202ENST00000561978 THSD7BQ9C0I4 1608 aa13.04□□□□□ -0.32
PCAT1-202ENST00000561978 PNMA6FA0A0J9YX94 578 aa13.04□□□□□ -0.32
PCAT1-202ENST00000561978 MANSC4A6NHS7 340 aaPredicted RBP13.04□□□□□ -0.32
PCAT1-202ENST00000561978 CCNT1O60563 726 aaKnown RBP13.04□□□□□ -0.32
PCAT1-202ENST00000561978 OR52Z1P0C646 297 aa13.04□□□□□ -0.32
PCAT1-202ENST00000561978 HMGCS2P54868 508 aa13.04□□□□□ -0.32
PCAT1-202ENST00000561978 TMEM179Q6ZVK1 233 aa13.04□□□□□ -0.32
PCAT1-202ENST00000561978 ACER1Q8TDN7 264 aa13.04□□□□□ -0.32
PCAT1-202ENST00000561978 UBA5Q9GZZ9 404 aa13.04□□□□□ -0.32
PCAT1-202ENST00000561978 KCNH4Q9UQ05 1017 aa13.04□□□□□ -0.32
PCAT1-202ENST00000561978 RPN1P04843 607 aaKnown RBP13.03□□□□□ -0.32
PCAT1-202ENST00000561978 ADCY7P51828 1080 aa13.03□□□□□ -0.32
PCAT1-202ENST00000561978 ATP2B2Q01814 1243 aa13.03□□□□□ -0.32
PCAT1-202ENST00000561978 MAP2K1Q02750 393 aaPredicted RBP13.03□□□□□ -0.32
PCAT1-202ENST00000561978 SPAG1Q07617 926 aa13.03□□□□□ -0.32
PCAT1-202ENST00000561978 ZNF543Q08ER8 600 aa13.03□□□□□ -0.32
PCAT1-202ENST00000561978 SREBF2Q12772 1141 aa13.03□□□□□ -0.32
PCAT1-202ENST00000561978 KCNB1Q14721 858 aa13.03□□□□□ -0.32
PCAT1-202ENST00000561978 NR1I3Q14994 352 aa13.03□□□□□ -0.32
PCAT1-202ENST00000561978 LETM2Q2VYF4 491 aa13.03□□□□□ -0.32
PCAT1-202ENST00000561978 NYAP1Q6ZVC0 841 aa13.03□□□□□ -0.32
PCAT1-202ENST00000561978 FCHSD1Q86WN1 690 aa13.03□□□□□ -0.32
PCAT1-202ENST00000561978 TRMT44Q8IYL2 757 aaKnown RBP13.03□□□□□ -0.32
PCAT1-202ENST00000561978 CCDC47Q96A33 483 aaKnown RBP13.03□□□□□ -0.32
PCAT1-202ENST00000561978 GLT8D2Q9H1C3 349 aa13.03□□□□□ -0.32
PCAT1-202ENST00000561978 TMEM60Q9H2L4 133 aa13.03□□□□□ -0.32
PCAT1-202ENST00000561978 CPVLQ9H3G5 476 aa13.03□□□□□ -0.32
PCAT1-202ENST00000561978 TMX1Q9H3N1 280 aa13.03□□□□□ -0.32
PCAT1-202ENST00000561978 AS3MTQ9HBK9 375 aa13.03□□□□□ -0.32
PCAT1-202ENST00000561978 SAMSN1Q9NSI8 373 aaKnown RBP13.03□□□□□ -0.32
PCAT1-202ENST00000561978 RWDD2AQ9UIY3 292 aa13.03□□□□□ -0.32
PCAT1-202ENST00000561978 TSKSQ9UJT2 592 aa13.03□□□□□ -0.32
PCAT1-202ENST00000561978 HTTP42858 3142 aa13.03□□□□□ -0.32
PCAT1-202ENST00000561978 A0A1B0GTH6 734 aa13.03□□□□□ -0.32
PCAT1-202ENST00000561978 A0A1W2PRG0 241 aa13.03□□□□□ -0.32
PCAT1-202ENST00000561978 TRPA1O75762 1119 aa13.03□□□□□ -0.32
PCAT1-202ENST00000561978 CETPP11597 493 aa13.03□□□□□ -0.32
PCAT1-202ENST00000561978 TM4SF4P48230 202 aa13.03□□□□□ -0.32
PCAT1-202ENST00000561978 ICA1Q05084 483 aa13.03□□□□□ -0.32
PCAT1-202ENST00000561978 TBX2Q13207 712 aaPredicted RBP13.03□□□□□ -0.32
PCAT1-202ENST00000561978 KARSQ15046 597 aaKnown RBP13.03□□□□□ -0.32
PCAT1-202ENST00000561978 KLHL10Q6JEL2 608 aa13.03□□□□□ -0.32
PCAT1-202ENST00000561978 LRRC47Q8N1G4 583 aaKnown RBP13.03□□□□□ -0.32
PCAT1-202ENST00000561978 ANKRD20A12PQ8NF67 263 aa13.03□□□□□ -0.32
PCAT1-202ENST00000561978 WBP1LQ9NX94 342 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms