RNA–Protein interactions for RNA: ENST00000561951.5

BBS2-204, Transcript of Bardet-Biedl syndrome 2, human

TSL 3

Gene BBS2, Length 845 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS2-204	ENST00000561951	COL9A3	Q14050	684 aa	Predicted RBP	13.68	□□□□□ -0.22
BBS2-204	ENST00000561951	PSRC1	Q6PGN9	363 aa	Predicted RBP	13.68	□□□□□ -0.22
BBS2-204	ENST00000561951	IL31RA	Q8NI17	732 aa		13.68	□□□□□ -0.22
BBS2-204	ENST00000561951	ZFP91	Q96JP5	570 aa	Predicted RBP	13.68	□□□□□ -0.22
BBS2-204	ENST00000561951	GUCD1	Q96NT3	240 aa		13.68	□□□□□ -0.22
BBS2-204	ENST00000561951	NOC4L	Q9BVI4	516 aa	Known RBP	13.68	□□□□□ -0.22
BBS2-204	ENST00000561951	SEZ6L	Q9BYH1	1024 aa		13.68	□□□□□ -0.22
BBS2-204	ENST00000561951	SEC63	Q9UGP8	760 aa	Known RBP	13.68	□□□□□ -0.22
BBS2-204	ENST00000561951		A6NJR5	290 aa		13.67	□□□□□ -0.22
BBS2-204	ENST00000561951	GCOM1	H8Y6P7	765 aa	Predicted RBP	13.67	□□□□□ -0.22
BBS2-204	ENST00000561951	CDC45	O75419	566 aa		13.67	□□□□□ -0.22
BBS2-204	ENST00000561951	PLEKHA8P1	O95397	391 aa		13.67	□□□□□ -0.22
BBS2-204	ENST00000561951	POLR2M	P0CAP2	368 aa		13.67	□□□□□ -0.22
BBS2-204	ENST00000561951	ARHGAP1	Q07960	439 aa		13.67	□□□□□ -0.22
BBS2-204	ENST00000561951	PGM5	Q15124	567 aa		13.67	□□□□□ -0.22
BBS2-204	ENST00000561951	NBPF20	Q3BBV1	942 aa		13.67	□□□□□ -0.22
BBS2-204	ENST00000561951	CCDC62	Q6P9F0	684 aa		13.67	□□□□□ -0.22
BBS2-204	ENST00000561951	RRP36	Q96EU6	259 aa	Known RBP	13.67	□□□□□ -0.22
BBS2-204	ENST00000561951	SCLY	Q96I15	445 aa		13.67	□□□□□ -0.22
BBS2-204	ENST00000561951	CCDC136	Q96JN2	1154 aa		13.67	□□□□□ -0.22
BBS2-204	ENST00000561951	TMEM87B	Q96K49	555 aa		13.67	□□□□□ -0.22
BBS2-204	ENST00000561951	PDCD2L	Q9BRP1	358 aa		13.67	□□□□□ -0.22
BBS2-204	ENST00000561951	WNT8A	Q9H1J5	351 aa		13.67	□□□□□ -0.22
BBS2-204	ENST00000561951	NOD1	Q9Y239	953 aa		13.67	□□□□□ -0.22
BBS2-204	ENST00000561951	STXBP5L	Q9Y2K9	1186 aa		13.67	□□□□□ -0.22
BBS2-204	ENST00000561951	KPNA6	O60684	536 aa		13.66	□□□□□ -0.22
BBS2-204	ENST00000561951	EIF3J	O75822	258 aa	Known RBP	13.66	□□□□□ -0.22
BBS2-204	ENST00000561951	ZNF286B	P0CG31	522 aa		13.66	□□□□□ -0.22
BBS2-204	ENST00000561951	CCND2	P30279	289 aa		13.66	□□□□□ -0.22
BBS2-204	ENST00000561951	GHRHR	Q02643	423 aa		13.66	□□□□□ -0.22
BBS2-204	ENST00000561951	TMEM240	Q5SV17	173 aa		13.66	□□□□□ -0.22
BBS2-204	ENST00000561951	RNF20	Q5VTR2	975 aa		13.66	□□□□□ -0.22
BBS2-204	ENST00000561951	FAM109B	Q6ICB4	259 aa	Predicted RBP	13.66	□□□□□ -0.22
BBS2-204	ENST00000561951	ZNF365	Q70YC5	407 aa		13.66	□□□□□ -0.22
BBS2-204	ENST00000561951	MICU3	Q86XE3	530 aa		13.66	□□□□□ -0.22
BBS2-204	ENST00000561951	CMTR1	Q8N1G2	835 aa	Known RBP	13.66	□□□□□ -0.22
BBS2-204	ENST00000561951	SPZ1	Q9BXG8	430 aa		13.66	□□□□□ -0.22
BBS2-204	ENST00000561951	IL23A	Q9NPF7	189 aa		13.66	□□□□□ -0.22
BBS2-204	ENST00000561951	TRIP12	Q14669	1992 aa	Predicted RBP	13.65	□□□□□ -0.22
BBS2-204	ENST00000561951	SUPT20HL2	P0C7V6	817 aa		13.65	□□□□□ -0.22
BBS2-204	ENST00000561951	DNAJB2	P25686	324 aa		13.65	□□□□□ -0.22
BBS2-204	ENST00000561951	NECTIN1	Q15223	517 aa		13.65	□□□□□ -0.22
BBS2-204	ENST00000561951	NFRKB	Q6P4R8	1299 aa		13.65	□□□□□ -0.22
BBS2-204	ENST00000561951	C16orf59	Q7L2K0	433 aa		13.65	□□□□□ -0.22
BBS2-204	ENST00000561951	DHX37	Q8IY37	1157 aa	Known RBP	13.65	□□□□□ -0.22
BBS2-204	ENST00000561951	SLC17A8	Q8NDX2	589 aa		13.65	□□□□□ -0.22
BBS2-204	ENST00000561951	SMARCC2	Q8TAQ2	1214 aa		13.65	□□□□□ -0.22
BBS2-204	ENST00000561951	TCEANC2	Q96MN5	208 aa		13.65	□□□□□ -0.22
BBS2-204	ENST00000561951	TTYH1	Q9H313	450 aa	Predicted RBP	13.65	□□□□□ -0.22
BBS2-204	ENST00000561951	MAP3K20	Q9NYL2	800 aa	Known RBP	13.65	□□□□□ -0.22
BBS2-204	ENST00000561951	DDX41	Q9UJV9	622 aa	Known RBP	13.65	□□□□□ -0.22
BBS2-204	ENST00000561951	SLC12A7	Q9Y666	1083 aa		13.65	□□□□□ -0.22
BBS2-204	ENST00000561951	hCG_1642624	A0A1W2PR95	340 aa		13.64	□□□□□ -0.23
BBS2-204	ENST00000561951	ZBBX	A8MT70	800 aa		13.64	□□□□□ -0.23
BBS2-204	ENST00000561951	GRXCR1	A8MXD5	290 aa		13.64	□□□□□ -0.23
BBS2-204	ENST00000561951	GGPS1	O95749	300 aa		13.64	□□□□□ -0.23
BBS2-204	ENST00000561951	CALM1	P0DP23	149 aa		13.64	□□□□□ -0.23
BBS2-204	ENST00000561951	CALM2	P0DP24	149 aa		13.64	□□□□□ -0.23
BBS2-204	ENST00000561951	CALM3	P0DP25	149 aa		13.64	□□□□□ -0.23
BBS2-204	ENST00000561951	UBA1	P22314	1058 aa	Known RBP	13.64	□□□□□ -0.23
BBS2-204	ENST00000561951	DGKD	Q16760	1214 aa		13.64	□□□□□ -0.23
BBS2-204	ENST00000561951	OTOP2	Q7RTS6	562 aa		13.64	□□□□□ -0.23
BBS2-204	ENST00000561951	DEFB128	Q7Z7B8	93 aa		13.64	□□□□□ -0.23
BBS2-204	ENST00000561951	CCDC82	Q8N4S0	544 aa		13.64	□□□□□ -0.23
BBS2-204	ENST00000561951	CUL5	Q93034	780 aa		13.64	□□□□□ -0.23
BBS2-204	ENST00000561951	MAP3K14	Q99558	947 aa		13.64	□□□□□ -0.23
BBS2-204	ENST00000561951	ALG1	Q9BT22	464 aa		13.64	□□□□□ -0.23
BBS2-204	ENST00000561951	MTA3	Q9BTC8	594 aa		13.64	□□□□□ -0.23
BBS2-204	ENST00000561951	MTIF3	Q9H2K0	278 aa	Known RBP	13.64	□□□□□ -0.23
BBS2-204	ENST00000561951	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	13.63	□□□□□ -0.23
BBS2-204	ENST00000561951	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	13.63	□□□□□ -0.23
BBS2-204	ENST00000561951	RGS20	O76081	388 aa		13.63	□□□□□ -0.23
BBS2-204	ENST00000561951	FGB	P02675	491 aa		13.63	□□□□□ -0.23
BBS2-204	ENST00000561951	CAST	P20810	708 aa	Known RBP	13.63	□□□□□ -0.23
BBS2-204	ENST00000561951	LIFR	P42702	1097 aa		13.63	□□□□□ -0.23
BBS2-204	ENST00000561951	GNAQ	P50148	359 aa		13.63	□□□□□ -0.23
BBS2-204	ENST00000561951	TMTC2	Q8N394	836 aa		13.63	□□□□□ -0.23
BBS2-204	ENST00000561951	SRBD1	Q8N5C6	995 aa	Known RBP	13.63	□□□□□ -0.23
BBS2-204	ENST00000561951	SAMD3	Q8N6K7	520 aa		13.63	□□□□□ -0.23
BBS2-204	ENST00000561951	PPTC7	Q8NI37	304 aa		13.63	□□□□□ -0.23
BBS2-204	ENST00000561951	MYLIP	Q8WY64	445 aa		13.63	□□□□□ -0.23
BBS2-204	ENST00000561951	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	13.63	□□□□□ -0.23
BBS2-204	ENST00000561951	TIFA	Q96CG3	184 aa		13.63	□□□□□ -0.23
BBS2-204	ENST00000561951	SPATA33	Q96N06	139 aa		13.63	□□□□□ -0.23
BBS2-204	ENST00000561951	CDX2	Q99626	313 aa	Predicted RBP	13.63	□□□□□ -0.23
BBS2-204	ENST00000561951	LZTS2	Q9BRK4	669 aa		13.63	□□□□□ -0.23
BBS2-204	ENST00000561951	SEMA6B	Q9H3T3	888 aa		13.63	□□□□□ -0.23
BBS2-204	ENST00000561951	CXXC1	Q9P0U4	656 aa	Predicted RBP	13.63	□□□□□ -0.23
BBS2-204	ENST00000561951	FOSL2	P15408	326 aa		13.62	□□□□□ -0.23
BBS2-204	ENST00000561951	PBX2	P40425	430 aa		13.62	□□□□□ -0.23
BBS2-204	ENST00000561951	PTPN11	Q06124	597 aa	Predicted RBP	13.62	□□□□□ -0.23
BBS2-204	ENST00000561951	LAMC2	Q13753	1193 aa		13.62	□□□□□ -0.23
BBS2-204	ENST00000561951	MFSD10	Q14728	455 aa		13.62	□□□□□ -0.23
BBS2-204	ENST00000561951	PTGIS	Q16647	500 aa		13.62	□□□□□ -0.23
BBS2-204	ENST00000561951	USP17L6P	Q6QN14	398 aa		13.62	□□□□□ -0.23
BBS2-204	ENST00000561951	SYNE3	Q6ZMZ3	975 aa		13.62	□□□□□ -0.23
BBS2-204	ENST00000561951	TMTC3	Q6ZXV5	915 aa		13.62	□□□□□ -0.23
BBS2-204	ENST00000561951	HEATR3	Q7Z4Q2	680 aa		13.62	□□□□□ -0.23
BBS2-204	ENST00000561951	VSIG10L	Q86VR7	867 aa		13.62	□□□□□ -0.23
BBS2-204	ENST00000561951	C7orf31	Q8N865	590 aa		13.62	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms