RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 PRRC2BQ5JSZ5 2229 aaKnown RBP29.4■■■□□ 2.3
NME3-202ENST00000561637 ZBTB5O15062 677 aa29.39■■■□□ 2.3
NME3-202ENST00000561637 PIBF1Q8WXW3 757 aa29.39■■■□□ 2.3
NME3-202ENST00000561637 AMNQ9BXJ7 453 aa29.39■■■□□ 2.3
NME3-202ENST00000561637 LY9Q9HBG7 655 aa29.39■■■□□ 2.3
NME3-202ENST00000561637 ERICH2A1L162 156 aa29.38■■■□□ 2.29
NME3-202ENST00000561637 CFBP00751 764 aa29.38■■■□□ 2.29
NME3-202ENST00000561637 EIF2AK2P19525 551 aaKnown RBP29.38■■■□□ 2.29
NME3-202ENST00000561637 PPP2R5BQ15173 497 aa29.38■■■□□ 2.29
NME3-202ENST00000561637 BMP2KLQ5H9B9 411 aa29.38■■■□□ 2.29
NME3-202ENST00000561637 FAM122AQ96E09 287 aa29.38■■■□□ 2.29
NME3-202ENST00000561637 RMDN3Q96TC7 470 aa29.38■■■□□ 2.29
NME3-202ENST00000561637 RIOX1Q9H6W3 641 aa29.38■■■□□ 2.29
NME3-202ENST00000561637 ANO2Q9NQ90 1003 aa29.38■■■□□ 2.29
NME3-202ENST00000561637 PRC1O43663 620 aa29.37■■■□□ 2.29
NME3-202ENST00000561637 B4GALT4O60513 344 aa29.37■■■□□ 2.29
NME3-202ENST00000561637 MYL3P08590 195 aa29.37■■■□□ 2.29
NME3-202ENST00000561637 HOXA13P31271 388 aaPredicted RBP29.37■■■□□ 2.29
NME3-202ENST00000561637 PPP2R2DQ66LE6 453 aa29.37■■■□□ 2.29
NME3-202ENST00000561637 CREB3L3Q68CJ9 461 aa29.37■■■□□ 2.29
NME3-202ENST00000561637 SEPT14Q6ZU15 432 aa29.37■■■□□ 2.29
NME3-202ENST00000561637 MCF2L2Q86YR7 1114 aa29.37■■■□□ 2.29
NME3-202ENST00000561637 SCFD2Q8WU76 684 aa29.37■■■□□ 2.29
NME3-202ENST00000561637 PCDHA1Q9Y5I3 950 aa29.37■■■□□ 2.29
NME3-202ENST00000561637 TXNP10599 105 aaKnown RBP29.36■■■□□ 2.29
NME3-202ENST00000561637 KCNQ1P51787 676 aa29.36■■■□□ 2.29
NME3-202ENST00000561637 RAB11FIP4Q86YS3 637 aa29.36■■■□□ 2.29
NME3-202ENST00000561637 SCLYQ96I15 445 aa29.36■■■□□ 2.29
NME3-202ENST00000561637 LRRC2Q9BYS8 371 aa29.36■■■□□ 2.29
NME3-202ENST00000561637 SLC4A7Q9Y6M7 1214 aa29.36■■■□□ 2.29
NME3-202ENST00000561637 ZEB2O60315 1214 aa29.35■■■□□ 2.29
NME3-202ENST00000561637 CABYRO75952 493 aa29.35■■■□□ 2.29
NME3-202ENST00000561637 HSD17B4P51659 736 aa29.35■■■□□ 2.29
NME3-202ENST00000561637 PURAQ00577 322 aaKnown RBP29.35■■■□□ 2.29
NME3-202ENST00000561637 SART3Q15020 963 aaKnown RBP29.35■■■□□ 2.29
NME3-202ENST00000561637 NECTIN1Q15223 517 aa29.35■■■□□ 2.29
NME3-202ENST00000561637 CCDC62Q6P9F0 684 aa29.35■■■□□ 2.29
NME3-202ENST00000561637 NSUN6Q8TEA1 469 aaKnown RBP29.35■■■□□ 2.29
NME3-202ENST00000561637 TSPYL2Q9H2G4 693 aaPredicted RBP29.35■■■□□ 2.29
NME3-202ENST00000561637 RFXAPO00287 272 aa29.34■■■□□ 2.29
NME3-202ENST00000561637 SH2B2O14492 632 aaPredicted RBP29.34■■■□□ 2.29
NME3-202ENST00000561637 RXRAP19793 462 aa29.34■■■□□ 2.29
NME3-202ENST00000561637 LY6KQ17RY6 165 aa29.34■■■□□ 2.29
NME3-202ENST00000561637 CATIPQ7Z7H3 387 aa29.34■■■□□ 2.29
NME3-202ENST00000561637 ZNF654Q8IZM8 581 aa29.34■■■□□ 2.29
NME3-202ENST00000561637 IL31RAQ8NI17 732 aa29.34■■■□□ 2.29
NME3-202ENST00000561637 ZFP91Q96JP5 570 aaPredicted RBP29.34■■■□□ 2.29
NME3-202ENST00000561637 MPHOSPH6Q99547 160 aaKnown RBP29.34■■■□□ 2.29
NME3-202ENST00000561637 PXMP2Q9NR77 195 aa29.34■■■□□ 2.29
NME3-202ENST00000561637 PCDHA11Q9Y5I1 949 aa29.34■■■□□ 2.29
NME3-202ENST00000561637 ARHGEF16Q5VV41 709 aa29.33■■■□□ 2.29
NME3-202ENST00000561637 SCN10AQ9Y5Y9 1956 aa29.32■■■□□ 2.28
NME3-202ENST00000561637 ZBBXA8MT70 800 aa29.32■■■□□ 2.28
NME3-202ENST00000561637 GHRHRQ02643 423 aa29.32■■■□□ 2.28
NME3-202ENST00000561637 RPUSD2Q8IZ73 545 aaKnown RBP29.32■■■□□ 2.28
NME3-202ENST00000561637 TRMT13Q9NUP7 481 aaKnown RBP29.32■■■□□ 2.28
NME3-202ENST00000561637 PLEKHA8P1O95397 391 aa29.31■■■□□ 2.28
NME3-202ENST00000561637 NR3C2P08235 984 aa29.31■■■□□ 2.28
NME3-202ENST00000561637 CPT1AP50416 773 aa29.31■■■□□ 2.28
NME3-202ENST00000561637 ARHGAP1Q07960 439 aa29.31■■■□□ 2.28
NME3-202ENST00000561637 TTLL4Q14679 1199 aa29.31■■■□□ 2.28
NME3-202ENST00000561637 CMTR1Q8N1G2 835 aaKnown RBP29.31■■■□□ 2.28
NME3-202ENST00000561637 ALDH8A1Q9H2A2 487 aaPredicted RBP29.31■■■□□ 2.28
NME3-202ENST00000561637 POLR3EQ9NVU0 708 aa29.31■■■□□ 2.28
NME3-202ENST00000561637 KIAA1217Q5T5P2 1943 aa29.31■■■□□ 2.28
NME3-202ENST00000561637 A6NJR5 290 aa29.3■■■□□ 2.28
NME3-202ENST00000561637 RBAK-RBAKDNI3L0D1 243 aa29.3■■■□□ 2.28
NME3-202ENST00000561637 NKRFO15226 690 aaKnown RBP eCLIP29.3■■■□□ 2.28
NME3-202ENST00000561637 ATP2A2P16615 1042 aaKnown RBP29.3■■■□□ 2.28
NME3-202ENST00000561637 SKIV2LQ15477 1246 aaKnown RBP29.3■■■□□ 2.28
NME3-202ENST00000561637 STXBP2Q15833 593 aa29.3■■■□□ 2.28
NME3-202ENST00000561637 CASC1Q6TDU7 716 aa29.3■■■□□ 2.28
NME3-202ENST00000561637 AFG1LQ8WV93 481 aa29.3■■■□□ 2.28
NME3-202ENST00000561637 IWS1Q96ST2 819 aa29.3■■■□□ 2.28
NME3-202ENST00000561637 MTG1Q9BT17 334 aaPredicted RBP29.3■■■□□ 2.28
NME3-202ENST00000561637 C1QTNF1Q9BXJ1 281 aa29.3■■■□□ 2.28
NME3-202ENST00000561637 MAF1Q9H063 256 aa29.3■■■□□ 2.28
NME3-202ENST00000561637 CERS4Q9HA82 394 aa29.3■■■□□ 2.28
NME3-202ENST00000561637 PNMA6FA0A0J9YX94 578 aa29.29■■■□□ 2.28
NME3-202ENST00000561637 B4DLN1 442 aa29.29■■■□□ 2.28
NME3-202ENST00000561637 SORBS3O60504 671 aa29.29■■■□□ 2.28
NME3-202ENST00000561637 RGS20O76081 388 aa29.29■■■□□ 2.28
NME3-202ENST00000561637 MYCLP12524 364 aaPredicted RBP29.29■■■□□ 2.28
NME3-202ENST00000561637 MCM5P33992 734 aa29.29■■■□□ 2.28
NME3-202ENST00000561637 MRPL12P52815 198 aaKnown RBP29.29■■■□□ 2.28
NME3-202ENST00000561637 PDCD2LQ9BRP1 358 aa29.29■■■□□ 2.28
NME3-202ENST00000561637 MTCH2Q9Y6C9 303 aa29.29■■■□□ 2.28
NME3-202ENST00000561637 EPOPA6NHQ4 379 aa29.28■■■□□ 2.28
NME3-202ENST00000561637 DDAH1O94760 285 aa29.28■■■□□ 2.28
NME3-202ENST00000561637 CYP2C9P11712 490 aa29.28■■■□□ 2.28
NME3-202ENST00000561637 NBPF20Q3BBV1 942 aa29.28■■■□□ 2.28
NME3-202ENST00000561637 KRT40Q6A162 431 aa29.28■■■□□ 2.28
NME3-202ENST00000561637 NFXL1Q6ZNB6 911 aa29.28■■■□□ 2.28
NME3-202ENST00000561637 FCHSD1Q86WN1 690 aa29.28■■■□□ 2.28
NME3-202ENST00000561637 TCEANC2Q96MN5 208 aa29.28■■■□□ 2.28
NME3-202ENST00000561637 EPHX3Q9H6B9 360 aa29.28■■■□□ 2.28
NME3-202ENST00000561637 CA3P07451 260 aa29.27■■■□□ 2.28
NME3-202ENST00000561637 RASEFQ8IZ41 740 aa29.27■■■□□ 2.28
NME3-202ENST00000561637 SRBD1Q8N5C6 995 aaKnown RBP29.27■■■□□ 2.28
NME3-202ENST00000561637 GPKOWQ92917 476 aaPredicted RBP eCLIP29.27■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms