RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 ARIH2O95376 493 aa11.62□□□□□ -0.55
HERC1-212ENST00000561348 SCG2P13521 617 aa11.62□□□□□ -0.55
HERC1-212ENST00000561348 ADCY7P51828 1080 aa11.62□□□□□ -0.55
HERC1-212ENST00000561348 AK2P54819 239 aa11.62□□□□□ -0.55
HERC1-212ENST00000561348 GJA9P57773 515 aa11.62□□□□□ -0.55
HERC1-212ENST00000561348 ANAPC15P60006 121 aa11.62□□□□□ -0.55
HERC1-212ENST00000561348 PSMC6P62333 389 aa11.62□□□□□ -0.55
HERC1-212ENST00000561348 SP4Q02446 784 aa11.62□□□□□ -0.55
HERC1-212ENST00000561348 BRDTQ58F21 947 aaPredicted RBP11.62□□□□□ -0.55
HERC1-212ENST00000561348 FAM47CQ5HY64 1035 aa11.62□□□□□ -0.55
HERC1-212ENST00000561348 JAKMIP3Q5VZ66 844 aa11.62□□□□□ -0.55
HERC1-212ENST00000561348 TRIM22Q8IYM9 498 aa11.62□□□□□ -0.55
HERC1-212ENST00000561348 NECAB1Q8N987 351 aa11.62□□□□□ -0.55
HERC1-212ENST00000561348 MORC4Q8TE76 937 aa11.62□□□□□ -0.55
HERC1-212ENST00000561348 TMEM260Q9NX78 707 aa11.62□□□□□ -0.55
HERC1-212ENST00000561348 MAP3K20Q9NYL2 800 aaKnown RBP11.62□□□□□ -0.55
HERC1-212ENST00000561348 PHF24Q9UPV7 400 aa11.62□□□□□ -0.55
HERC1-212ENST00000561348 GNEQ9Y223 722 aaKnown RBP11.62□□□□□ -0.55
HERC1-212ENST00000561348 MKI67P46013 3256 aaKnown RBP11.61□□□□□ -0.55
HERC1-212ENST00000561348 LOC102724159A0A0B4J2E5 919 aa11.61□□□□□ -0.55
HERC1-212ENST00000561348 MOXD2PA6NHM9 499 aa11.61□□□□□ -0.55
HERC1-212ENST00000561348 STXBP3O00186 592 aa11.61□□□□□ -0.55
HERC1-212ENST00000561348 MEIS2O14770 477 aa11.61□□□□□ -0.55
HERC1-212ENST00000561348 GH1P01241 217 aa11.61□□□□□ -0.55
HERC1-212ENST00000561348 EDNRBP24530 442 aa11.61□□□□□ -0.55
HERC1-212ENST00000561348 ZNF76P36508 570 aa11.61□□□□□ -0.55
HERC1-212ENST00000561348 CPT1AP50416 773 aa11.61□□□□□ -0.55
HERC1-212ENST00000561348 FOSBP53539 338 aa11.61□□□□□ -0.55
HERC1-212ENST00000561348 RCAN1P53805 252 aa11.61□□□□□ -0.55
HERC1-212ENST00000561348 MDM2Q00987 491 aaPredicted RBP11.61□□□□□ -0.55
HERC1-212ENST00000561348 TLE2Q04725 743 aa11.61□□□□□ -0.55
HERC1-212ENST00000561348 FUT2Q10981 343 aa11.61□□□□□ -0.55
HERC1-212ENST00000561348 PWP2Q15269 919 aaKnown RBP11.61□□□□□ -0.55
HERC1-212ENST00000561348 ANKRD1Q15327 319 aa11.61□□□□□ -0.55
HERC1-212ENST00000561348 CHRDL2Q6WN34 429 aa11.61□□□□□ -0.55
HERC1-212ENST00000561348 DHX37Q8IY37 1157 aaKnown RBP11.61□□□□□ -0.55
HERC1-212ENST00000561348 SAMD3Q8N6K7 520 aa11.61□□□□□ -0.55
HERC1-212ENST00000561348 KLHDC9Q8NEP7 349 aa11.61□□□□□ -0.55
HERC1-212ENST00000561348 ZNF274Q96GC6 653 aaPredicted RBP11.61□□□□□ -0.55
HERC1-212ENST00000561348 AGXT2Q9BYV1 514 aa11.61□□□□□ -0.55
HERC1-212ENST00000561348 C22orf23Q9BZE7 217 aa11.61□□□□□ -0.55
HERC1-212ENST00000561348 EHMT1Q9H9B1 1298 aa11.61□□□□□ -0.55
HERC1-212ENST00000561348 MLXIPQ9HAP2 919 aa11.61□□□□□ -0.55
HERC1-212ENST00000561348 VPS54Q9P1Q0 977 aa11.61□□□□□ -0.55
HERC1-212ENST00000561348 TPCN1Q9ULQ1 816 aa11.61□□□□□ -0.55
HERC1-212ENST00000561348 PCDHA6Q9UN73 950 aa11.61□□□□□ -0.55
HERC1-212ENST00000561348 PCDHA8Q9Y5H6 950 aa11.61□□□□□ -0.55
HERC1-212ENST00000561348 LRRC37A2A6NM11 1700 aa11.6□□□□□ -0.55
HERC1-212ENST00000561348 PRPF3O43395 683 aaKnown RBP11.6□□□□□ -0.55
HERC1-212ENST00000561348 NLRP5P59047 1200 aa11.6□□□□□ -0.55
HERC1-212ENST00000561348 PFKFB3Q16875 520 aaPredicted RBP11.6□□□□□ -0.55
HERC1-212ENST00000561348 GNPTABQ3T906 1256 aa11.6□□□□□ -0.55
HERC1-212ENST00000561348 TYW1BQ6NUM6 668 aa11.6□□□□□ -0.55
HERC1-212ENST00000561348 VSIG10LQ86VR7 867 aa11.6□□□□□ -0.55
HERC1-212ENST00000561348 CCDC12Q8WUD4 166 aaPredicted RBP11.6□□□□□ -0.55
HERC1-212ENST00000561348 AFG1LQ8WV93 481 aa11.6□□□□□ -0.55
HERC1-212ENST00000561348 UIMC1Q96RL1 719 aa11.6□□□□□ -0.55
HERC1-212ENST00000561348 LBHD1Q9BQE6 289 aaPredicted RBP11.6□□□□□ -0.55
HERC1-212ENST00000561348 TSEN34Q9BSV6 310 aaKnown RBP11.6□□□□□ -0.55
HERC1-212ENST00000561348 MAF1Q9H063 256 aa11.6□□□□□ -0.55
HERC1-212ENST00000561348 UPF3AQ9H1J1 476 aaKnown RBP11.6□□□□□ -0.55
HERC1-212ENST00000561348 C6orf50Q9HD87 102 aa11.6□□□□□ -0.55
HERC1-212ENST00000561348 RIC8AQ9NPQ8 531 aa11.6□□□□□ -0.55
HERC1-212ENST00000561348 BARHL2Q9NY43 387 aa11.6□□□□□ -0.55
HERC1-212ENST00000561348 ALPK3Q96L96 1907 aa11.6□□□□□ -0.55
HERC1-212ENST00000561348 CEP290O15078 2479 aa11.59□□□□□ -0.55
HERC1-212ENST00000561348 RBM47A0AV96 593 aaKnown RBP11.59□□□□□ -0.55
HERC1-212ENST00000561348 DCDC2CA8MYV0 355 aa11.59□□□□□ -0.55
HERC1-212ENST00000561348 NKRFO15226 690 aaKnown RBP eCLIP11.59□□□□□ -0.55
HERC1-212ENST00000561348 GGPS1O95749 300 aa11.59□□□□□ -0.55
HERC1-212ENST00000561348 IFNAR1P17181 557 aa11.59□□□□□ -0.55
HERC1-212ENST00000561348 SCRN1Q12765 414 aa11.59□□□□□ -0.55
HERC1-212ENST00000561348 NLRX1Q86UT6 975 aa11.59□□□□□ -0.55
HERC1-212ENST00000561348 FBXL16Q8N461 479 aa11.59□□□□□ -0.55
HERC1-212ENST00000561348 RASGRP4Q8TDF6 673 aa11.59□□□□□ -0.55
HERC1-212ENST00000561348 RNF26Q9BY78 433 aaPredicted RBP11.59□□□□□ -0.55
HERC1-212ENST00000561348 TMEM39AQ9NV64 488 aa11.59□□□□□ -0.55
HERC1-212ENST00000561348 POLR3EQ9NVU0 708 aa11.59□□□□□ -0.55
HERC1-212ENST00000561348 RBM27Q9P2N5 1060 aaKnown RBP11.59□□□□□ -0.55
HERC1-212ENST00000561348 DDX41Q9UJV9 622 aaKnown RBP11.59□□□□□ -0.55
HERC1-212ENST00000561348 MYH7BA7E2Y1 1941 aa11.58□□□□□ -0.55
HERC1-212ENST00000561348 A0A0U1RQG5 324 aaPredicted RBP11.58□□□□□ -0.56
HERC1-212ENST00000561348 hCG_1984214I3L0E3 225 aa11.58□□□□□ -0.56
HERC1-212ENST00000561348 PIK3CDO00329 1044 aa11.58□□□□□ -0.56
HERC1-212ENST00000561348 NOP56O00567 594 aaKnown RBP11.58□□□□□ -0.56
HERC1-212ENST00000561348 CTAGE5O15320 804 aa11.58□□□□□ -0.56
HERC1-212ENST00000561348 CDKL5O76039 1030 aa11.58□□□□□ -0.56
HERC1-212ENST00000561348 CST5P28325 142 aaPredicted RBP11.58□□□□□ -0.56
HERC1-212ENST00000561348 MRPS9P82933 396 aaKnown RBP11.58□□□□□ -0.56
HERC1-212ENST00000561348 GHRHRQ02643 423 aa11.58□□□□□ -0.56
HERC1-212ENST00000561348 ITGA7Q13683 1181 aa11.58□□□□□ -0.56
HERC1-212ENST00000561348 NTRK3Q16288 839 aa11.58□□□□□ -0.56
HERC1-212ENST00000561348 PKN1Q16512 942 aa11.58□□□□□ -0.56
HERC1-212ENST00000561348 CCSAPQ6IQ19 270 aaPredicted RBP11.58□□□□□ -0.56
HERC1-212ENST00000561348 PPP1R18Q6NYC8 613 aa11.58□□□□□ -0.56
HERC1-212ENST00000561348 CYFIP1Q7L576 1253 aa11.58□□□□□ -0.56
HERC1-212ENST00000561348 SH3RF1Q7Z6J0 888 aa11.58□□□□□ -0.56
HERC1-212ENST00000561348 ZNF713Q8N859 430 aaPredicted RBP11.58□□□□□ -0.56
HERC1-212ENST00000561348 CCDC148Q8NFR7 591 aa11.58□□□□□ -0.56
HERC1-212ENST00000561348 SPATA33Q96N06 139 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms