RNA–Protein interactions for RNA: ENST00000560993.1

SEMA4B-217, Transcript of semaphorin 4B, humanhuman

TSL 4

Gene SEMA4B, Length 556 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-217ENST00000560993 CALM3P0DP25 149 aa17.54■□□□□ 0.4
SEMA4B-217ENST00000560993 RXRAP19793 462 aa17.54■□□□□ 0.4
SEMA4B-217ENST00000560993 HOXD11P31277 338 aaPredicted RBP17.54■□□□□ 0.4
SEMA4B-217ENST00000560993 METAP2P50579 478 aaKnown RBP eCLIP17.54■□□□□ 0.4
SEMA4B-217ENST00000560993 ANKRD35Q8N283 1001 aa17.54■□□□□ 0.4
SEMA4B-217ENST00000560993 MKL1Q969V6 931 aa17.54■□□□□ 0.4
SEMA4B-217ENST00000560993 KIFC2Q96AC6 838 aa17.54■□□□□ 0.4
SEMA4B-217ENST00000560993 AGBL1Q96MI9 1066 aa17.54■□□□□ 0.4
SEMA4B-217ENST00000560993 NCOA5Q9HCD5 579 aaKnown RBP17.54■□□□□ 0.4
SEMA4B-217ENST00000560993 PDGFCQ9NRA1 345 aa17.54■□□□□ 0.4
SEMA4B-217ENST00000560993 FOXD4L1Q9NU39 408 aa17.54■□□□□ 0.4
SEMA4B-217ENST00000560993 CLIP2Q9UDT6 1046 aa17.54■□□□□ 0.4
SEMA4B-217ENST00000560993 MUC6Q6W4X9 2439 aa17.53■□□□□ 0.4
SEMA4B-217ENST00000560993 ZNF536O15090 1300 aa17.53■□□□□ 0.4
SEMA4B-217ENST00000560993 LRRC37A2A6NM11 1700 aa17.53■□□□□ 0.4
SEMA4B-217ENST00000560993 TLR3O15455 904 aaKnown RBP17.53■□□□□ 0.4
SEMA4B-217ENST00000560993 ARHGEF15O94989 841 aa17.53■□□□□ 0.4
SEMA4B-217ENST00000560993 SMPD1P17405 629 aa17.53■□□□□ 0.4
SEMA4B-217ENST00000560993 TNFAIP2Q03169 654 aa17.53■□□□□ 0.4
SEMA4B-217ENST00000560993 TROAPQ12815 778 aa17.53■□□□□ 0.4
SEMA4B-217ENST00000560993 ITGA7Q13683 1181 aa17.53■□□□□ 0.4
SEMA4B-217ENST00000560993 RTN1Q16799 776 aa17.53■□□□□ 0.4
SEMA4B-217ENST00000560993 CHST13Q8NET6 341 aa17.53■□□□□ 0.4
SEMA4B-217ENST00000560993 EPHX3Q9H6B9 360 aa17.53■□□□□ 0.4
SEMA4B-217ENST00000560993 SPC25Q9HBM1 224 aa17.53■□□□□ 0.4
SEMA4B-217ENST00000560993 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.53■□□□□ 0.4
SEMA4B-217ENST00000560993 LCTP09848 1927 aa17.53■□□□□ 0.4
SEMA4B-217ENST00000560993 SCN5AQ14524 2016 aa17.52■□□□□ 0.4
SEMA4B-217ENST00000560993 DHX16O60231 1041 aaKnown RBP17.52■□□□□ 0.4
SEMA4B-217ENST00000560993 ZBED4O75132 1171 aa17.52■□□□□ 0.4
SEMA4B-217ENST00000560993 PSMC6P62333 389 aa17.52■□□□□ 0.4
SEMA4B-217ENST00000560993 TTLL4Q14679 1199 aa17.52■□□□□ 0.4
SEMA4B-217ENST00000560993 PPP2R5BQ15173 497 aa17.52■□□□□ 0.4
SEMA4B-217ENST00000560993 KRT40Q6A162 431 aa17.52■□□□□ 0.4
SEMA4B-217ENST00000560993 TAPT1Q6NXT6 567 aa17.52■□□□□ 0.4
SEMA4B-217ENST00000560993 LRRC47Q8N1G4 583 aaKnown RBP17.52■□□□□ 0.4
SEMA4B-217ENST00000560993 FANCBQ8NB91 859 aa17.52■□□□□ 0.4
SEMA4B-217ENST00000560993 KHSRPQ92945 711 aaKnown RBP eCLIP17.52■□□□□ 0.4
SEMA4B-217ENST00000560993 FAM122AQ96E09 287 aa17.52■□□□□ 0.4
SEMA4B-217ENST00000560993 SCLYQ96I15 445 aa17.52■□□□□ 0.4
SEMA4B-217ENST00000560993 MAP3K14Q99558 947 aa17.52■□□□□ 0.4
SEMA4B-217ENST00000560993 LLPHQ9BRT6 129 aaKnown RBP17.52■□□□□ 0.4
SEMA4B-217ENST00000560993 A1CFQ9NQ94 594 aaKnown RBP17.52■□□□□ 0.4
SEMA4B-217ENST00000560993 HOMER2Q9NSB8 354 aa17.52■□□□□ 0.4
SEMA4B-217ENST00000560993 FAM217BQ9NTX9 383 aaPredicted RBP17.52■□□□□ 0.4
SEMA4B-217ENST00000560993 MTCH2Q9Y6C9 303 aa17.52■□□□□ 0.4
SEMA4B-217ENST00000560993 TET1Q8NFU7 2136 aa17.51■□□□□ 0.39
SEMA4B-217ENST00000560993 POU3F3P20264 500 aaPredicted RBP17.51■□□□□ 0.39
SEMA4B-217ENST00000560993 CDC27P30260 824 aa17.51■□□□□ 0.39
SEMA4B-217ENST00000560993 GRM4Q14833 912 aa17.51■□□□□ 0.39
SEMA4B-217ENST00000560993 FSCN1Q16658 493 aaKnown RBP17.51■□□□□ 0.39
SEMA4B-217ENST00000560993 NSUN7Q8NE18 718 aaKnown RBP17.51■□□□□ 0.39
SEMA4B-217ENST00000560993 SYNPO2Q9UMS6 1093 aa17.51■□□□□ 0.39
SEMA4B-217ENST00000560993 PCDHA11Q9Y5I1 949 aa17.51■□□□□ 0.39
SEMA4B-217ENST00000560993 CCDC196A0A1B0GTZ2 297 aa17.5■□□□□ 0.39
SEMA4B-217ENST00000560993 RBAK-RBAKDNI3L0D1 243 aa17.5■□□□□ 0.39
SEMA4B-217ENST00000560993 CPLX1O14810 134 aa17.5■□□□□ 0.39
SEMA4B-217ENST00000560993 CTDNEP1O95476 244 aa17.5■□□□□ 0.39
SEMA4B-217ENST00000560993 ADD1P35611 737 aaKnown RBP17.5■□□□□ 0.39
SEMA4B-217ENST00000560993 OAZ1P54368 228 aa17.5■□□□□ 0.39
SEMA4B-217ENST00000560993 PPP2R2DQ66LE6 453 aa17.5■□□□□ 0.39
SEMA4B-217ENST00000560993 TLK2Q86UE8 772 aa17.5■□□□□ 0.39
SEMA4B-217ENST00000560993 MICALL1Q8N3F8 863 aa17.5■□□□□ 0.39
SEMA4B-217ENST00000560993 CTCFLQ8NI51 663 aaPredicted RBP17.5■□□□□ 0.39
SEMA4B-217ENST00000560993 PURBQ96QR8 312 aaKnown RBP17.5■□□□□ 0.39
SEMA4B-217ENST00000560993 LRFN3Q9BTN0 628 aa17.5■□□□□ 0.39
SEMA4B-217ENST00000560993 RBM28Q9NW13 759 aaKnown RBP17.5■□□□□ 0.39
SEMA4B-217ENST00000560993 FBXO40Q9UH90 709 aa17.5■□□□□ 0.39
SEMA4B-217ENST00000560993 FEM1BQ9UK73 627 aa17.5■□□□□ 0.39
SEMA4B-217ENST00000560993 SMC3Q9UQE7 1217 aa17.5■□□□□ 0.39
SEMA4B-217ENST00000560993 SLC4A7Q9Y6M7 1214 aa17.5■□□□□ 0.39
SEMA4B-217ENST00000560993 DYNC1LI2O43237 492 aaPredicted RBP17.49■□□□□ 0.39
SEMA4B-217ENST00000560993 TLL1O43897 1013 aa17.49■□□□□ 0.39
SEMA4B-217ENST00000560993 KIF5BP33176 963 aa17.49■□□□□ 0.39
SEMA4B-217ENST00000560993 CPLX2Q6PUV4 134 aaKnown RBP17.49■□□□□ 0.39
SEMA4B-217ENST00000560993 SPRED2Q7Z698 418 aa17.49■□□□□ 0.39
SEMA4B-217ENST00000560993 SMARCC2Q8TAQ2 1214 aa17.49■□□□□ 0.39
SEMA4B-217ENST00000560993 C11orf16Q9NQ32 467 aa17.49■□□□□ 0.39
SEMA4B-217ENST00000560993 PTPDC1A2A3K4 754 aa17.48■□□□□ 0.39
SEMA4B-217ENST00000560993 JAK2O60674 1132 aa17.48■□□□□ 0.39
SEMA4B-217ENST00000560993 CABYRO75952 493 aa17.48■□□□□ 0.39
SEMA4B-217ENST00000560993 CDKL5O76039 1030 aa17.48■□□□□ 0.39
SEMA4B-217ENST00000560993 SNHG28P0DPA3 235 aa17.48■□□□□ 0.39
SEMA4B-217ENST00000560993 PDHBP11177 359 aa17.48■□□□□ 0.39
SEMA4B-217ENST00000560993 CYP2C9P11712 490 aa17.48■□□□□ 0.39
SEMA4B-217ENST00000560993 ATP2A2P16615 1042 aaKnown RBP17.48■□□□□ 0.39
SEMA4B-217ENST00000560993 DDIT3P35638 169 aa17.48■□□□□ 0.39
SEMA4B-217ENST00000560993 NTRK3Q16288 839 aa17.48■□□□□ 0.39
SEMA4B-217ENST00000560993 GMCL1P1Q8NEA9 526 aa17.48■□□□□ 0.39
SEMA4B-217ENST00000560993 C1QTNF1Q9BXJ1 281 aa17.48■□□□□ 0.39
SEMA4B-217ENST00000560993 CERS4Q9HA82 394 aa17.48■□□□□ 0.39
SEMA4B-217ENST00000560993 TRMT13Q9NUP7 481 aaKnown RBP17.48■□□□□ 0.39
SEMA4B-217ENST00000560993 MTMR7Q9Y216 660 aa17.48■□□□□ 0.39
SEMA4B-217ENST00000560993 DTNBO60941 627 aa17.47■□□□□ 0.39
SEMA4B-217ENST00000560993 CA3P07451 260 aa17.47■□□□□ 0.39
SEMA4B-217ENST00000560993 IFNAR1P17181 557 aa17.47■□□□□ 0.39
SEMA4B-217ENST00000560993 GJB2P29033 226 aa17.47■□□□□ 0.39
SEMA4B-217ENST00000560993 SNAP25P60880 206 aa17.47■□□□□ 0.39
SEMA4B-217ENST00000560993 HMGN5P82970 282 aaKnown RBP17.47■□□□□ 0.39
SEMA4B-217ENST00000560993 MUM1L1Q5H9M0 696 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms