RNA–Protein interactions for RNA: ENST00000560935.1

IPO4-215, Transcript of importin 4, humanhuman

TSL 3

Gene IPO4, Length 701 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IPO4-215ENST00000560935 RBM28Q9NW13 759 aaKnown RBP23.11■■□□□ 1.29
IPO4-215ENST00000560935 GRIN2DO15399 1336 aa23.1■■□□□ 1.29
IPO4-215ENST00000560935 ZBTB43O43298 467 aa23.1■■□□□ 1.29
IPO4-215ENST00000560935 CD4P01730 458 aa23.1■■□□□ 1.29
IPO4-215ENST00000560935 CCND2P30279 289 aa23.1■■□□□ 1.29
IPO4-215ENST00000560935 FPGSQ05932 587 aa23.1■■□□□ 1.29
IPO4-215ENST00000560935 VSIG10LQ86VR7 867 aa23.1■■□□□ 1.29
IPO4-215ENST00000560935 ARHGAP1Q07960 439 aa23.09■■□□□ 1.29
IPO4-215ENST00000560935 KCNV1Q6PIU1 500 aa23.09■■□□□ 1.29
IPO4-215ENST00000560935 CCDC82Q8N4S0 544 aa23.09■■□□□ 1.29
IPO4-215ENST00000560935 IL31RAQ8NI17 732 aa23.09■■□□□ 1.29
IPO4-215ENST00000560935 SMARCC2Q8TAQ2 1214 aa23.09■■□□□ 1.29
IPO4-215ENST00000560935 JAKMIP1Q96N16 626 aaKnown RBP23.09■■□□□ 1.29
IPO4-215ENST00000560935 DDX41Q9UJV9 622 aaKnown RBP23.09■■□□□ 1.29
IPO4-215ENST00000560935 SNX14Q9Y5W7 946 aa23.09■■□□□ 1.29
IPO4-215ENST00000560935 SCN10AQ9Y5Y9 1956 aa23.09■■□□□ 1.29
IPO4-215ENST00000560935 KLF18A0A0U1RQI7 1052 aa23.08■■□□□ 1.29
IPO4-215ENST00000560935 SHHQ15465 462 aa23.08■■□□□ 1.29
IPO4-215ENST00000560935 RTN1Q16799 776 aa23.08■■□□□ 1.29
IPO4-215ENST00000560935 MFSD5Q6N075 450 aa23.08■■□□□ 1.29
IPO4-215ENST00000560935 BLOC1S2Q6QNY1 142 aa23.08■■□□□ 1.29
IPO4-215ENST00000560935 AFG1LQ8WV93 481 aa23.08■■□□□ 1.29
IPO4-215ENST00000560935 BRPF3Q9ULD4 1205 aa23.08■■□□□ 1.29
IPO4-215ENST00000560935 FRMPD4Q14CM0 1322 aa23.08■■□□□ 1.28
IPO4-215ENST00000560935 GOLGA8AA7E2F4 631 aa23.07■■□□□ 1.28
IPO4-215ENST00000560935 GOLGA8BA8MQT2 603 aa23.07■■□□□ 1.28
IPO4-215ENST00000560935 PIK3CDO00329 1044 aa23.07■■□□□ 1.28
IPO4-215ENST00000560935 EPB41L2O43491 1005 aaKnown RBP23.07■■□□□ 1.28
IPO4-215ENST00000560935 MMP3P08254 477 aa23.07■■□□□ 1.28
IPO4-215ENST00000560935 C9orf50Q5SZB4 431 aa23.07■■□□□ 1.28
IPO4-215ENST00000560935 GPR153Q6NV75 609 aa23.07■■□□□ 1.28
IPO4-215ENST00000560935 PPP1R12CQ9BZL4 782 aa23.07■■□□□ 1.28
IPO4-215ENST00000560935 ALDH8A1Q9H2A2 487 aaPredicted RBP23.07■■□□□ 1.28
IPO4-215ENST00000560935 hCG_1642624A0A1W2PR95 340 aa23.06■■□□□ 1.28
IPO4-215ENST00000560935 B4GALT4O60513 344 aa23.06■■□□□ 1.28
IPO4-215ENST00000560935 RGS20O76081 388 aa23.06■■□□□ 1.28
IPO4-215ENST00000560935 PSMA5P28066 241 aa23.06■■□□□ 1.28
IPO4-215ENST00000560935 RCAN1P53805 252 aa23.06■■□□□ 1.28
IPO4-215ENST00000560935 PPIGQ13427 754 aaKnown RBP eCLIP23.06■■□□□ 1.285e-7■□□□□ 11.1
IPO4-215ENST00000560935 LAMC2Q13753 1193 aa23.06■■□□□ 1.28
IPO4-215ENST00000560935 USP17L6PQ6QN14 398 aa23.06■■□□□ 1.28
IPO4-215ENST00000560935 DHX37Q8IY37 1157 aaKnown RBP23.06■■□□□ 1.28
IPO4-215ENST00000560935 TMEM199Q8N511 208 aa23.06■■□□□ 1.28
IPO4-215ENST00000560935 EMID1Q96A84 441 aaPredicted RBP23.06■■□□□ 1.28
IPO4-215ENST00000560935 TRPV6Q9H1D0 765 aa23.06■■□□□ 1.28
IPO4-215ENST00000560935 NAP1L2Q9ULW6 460 aaPredicted RBP23.06■■□□□ 1.28
IPO4-215ENST00000560935 MYH7BA7E2Y1 1941 aa23.06■■□□□ 1.28
IPO4-215ENST00000560935 CNTNAP5Q8WYK1 1306 aa23.06■■□□□ 1.28
IPO4-215ENST00000560935 STAM2O75886 525 aa23.05■■□□□ 1.28
IPO4-215ENST00000560935 SUPT20HL2P0C7V6 817 aa23.05■■□□□ 1.28
IPO4-215ENST00000560935 TGFB3P10600 412 aa23.05■■□□□ 1.28
IPO4-215ENST00000560935 CPA1P15085 419 aa23.05■■□□□ 1.28
IPO4-215ENST00000560935 CASTP20810 708 aaKnown RBP23.05■■□□□ 1.28
IPO4-215ENST00000560935 NBPF20Q3BBV1 942 aa23.05■■□□□ 1.28
IPO4-215ENST00000560935 GNPTABQ3T906 1256 aa23.05■■□□□ 1.28
IPO4-215ENST00000560935 FAM47CQ5HY64 1035 aa23.05■■□□□ 1.28
IPO4-215ENST00000560935 HEATR3Q7Z4Q2 680 aa23.05■■□□□ 1.28
IPO4-215ENST00000560935 HIPK3Q9H422 1215 aa23.05■■□□□ 1.28
IPO4-215ENST00000560935 PSTPIP2Q9H939 334 aa23.05■■□□□ 1.28
IPO4-215ENST00000560935 LAMA3Q16787 3333 aa23.05■■□□□ 1.28
IPO4-215ENST00000560935 MEIS2O14770 477 aa23.04■■□□□ 1.28
IPO4-215ENST00000560935 EPHB4P54760 987 aa23.04■■□□□ 1.28
IPO4-215ENST00000560935 DGKDQ16760 1214 aa23.04■■□□□ 1.28
IPO4-215ENST00000560935 NFRKBQ6P4R8 1299 aa23.04■■□□□ 1.28
IPO4-215ENST00000560935 Q6ZUG5 572 aa23.04■■□□□ 1.28
IPO4-215ENST00000560935 ZFP91Q96JP5 570 aaPredicted RBP23.04■■□□□ 1.28
IPO4-215ENST00000560935 RPS6KB1P23443 525 aa23.03■■□□□ 1.28
IPO4-215ENST00000560935 PTPN11Q06124 597 aaPredicted RBP23.03■■□□□ 1.28
IPO4-215ENST00000560935 XRRA1Q6P2D8 792 aa23.03■■□□□ 1.28
IPO4-215ENST00000560935 PPTC7Q8NI37 304 aa23.03■■□□□ 1.28
IPO4-215ENST00000560935 GPKOWQ92917 476 aaPredicted RBP eCLIP23.03■■□□□ 1.28
IPO4-215ENST00000560935 BRF1Q92994 677 aa23.03■■□□□ 1.28
IPO4-215ENST00000560935 RNPC3Q96LT9 517 aaKnown RBP23.03■■□□□ 1.28
IPO4-215ENST00000560935 TRMT13Q9NUP7 481 aaKnown RBP23.03■■□□□ 1.28
IPO4-215ENST00000560935 CCDC196A0A1B0GTZ2 297 aa23.02■■□□□ 1.28
IPO4-215ENST00000560935 GGPS1O95749 300 aa23.02■■□□□ 1.28
IPO4-215ENST00000560935 CSF2RAP15509 400 aa23.02■■□□□ 1.28
IPO4-215ENST00000560935 UBA1P22314 1058 aaKnown RBP23.02■■□□□ 1.28
IPO4-215ENST00000560935 CYP2C18P33260 490 aa23.02■■□□□ 1.28
IPO4-215ENST00000560935 METAP2P50579 478 aaKnown RBP eCLIP23.02■■□□□ 1.28
IPO4-215ENST00000560935 CHMP4BP1P59074 171 aa23.02■■□□□ 1.28
IPO4-215ENST00000560935 MRPS9P82933 396 aaKnown RBP23.02■■□□□ 1.28
IPO4-215ENST00000560935 APOBRQ0VD83 1088 aa23.02■■□□□ 1.28
IPO4-215ENST00000560935 CELF3Q5SZQ8 465 aaKnown RBP23.02■■□□□ 1.28
IPO4-215ENST00000560935 PCNX4Q63HM2 1172 aa23.02■■□□□ 1.28
IPO4-215ENST00000560935 INPP4AQ96PE3 977 aaPredicted RBP23.02■■□□□ 1.28
IPO4-215ENST00000560935 NOC4LQ9BVI4 516 aaKnown RBP23.02■■□□□ 1.28
IPO4-215ENST00000560935 hCG_1984214I3L0E3 225 aa23.01■■□□□ 1.27
IPO4-215ENST00000560935 FUT2Q10981 343 aa23.01■■□□□ 1.27
IPO4-215ENST00000560935 MYSM1Q5VVJ2 828 aa23.01■■□□□ 1.27
IPO4-215ENST00000560935 WWC2Q6AWC2 1192 aa23.01■■□□□ 1.27
IPO4-215ENST00000560935 FBXL16Q8N461 479 aa23.01■■□□□ 1.27
IPO4-215ENST00000560935 ZNF713Q8N859 430 aaPredicted RBP23.01■■□□□ 1.27
IPO4-215ENST00000560935 SPATA33Q96N06 139 aa23.01■■□□□ 1.27
IPO4-215ENST00000560935 KATNAL1Q9BW62 490 aa23.01■■□□□ 1.27
IPO4-215ENST00000560935 SZT2Q5T011 3432 aa23.01■■□□□ 1.27
IPO4-215ENST00000560935 SPDYE3A6NKU9 549 aa23■■□□□ 1.27
IPO4-215ENST00000560935 FIBPO43427 364 aa23■■□□□ 1.27
IPO4-215ENST00000560935 CDC27P30260 824 aa23■■□□□ 1.27
IPO4-215ENST00000560935 ICAM3P32942 547 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms