RNA–Protein interactions for RNA: ENST00000560927.1

CRTC3-210, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 2

Gene CRTC3, Length 2,463 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-210ENST00000560927 FKBP15Q5T1M5 1219 aa16.26■□□□□ 0.19
CRTC3-210ENST00000560927 GUF1Q8N442 669 aaKnown RBP16.26■□□□□ 0.19
CRTC3-210ENST00000560927 MSANTD4Q8NCY6 345 aa16.26■□□□□ 0.19
CRTC3-210ENST00000560927 ZNHIT6Q9NWK9 470 aaKnown RBP16.26■□□□□ 0.19
CRTC3-210ENST00000560927 DUSP10Q9Y6W6 482 aa16.26■□□□□ 0.19
CRTC3-210ENST00000560927 CTAGE15A4D2H0 777 aa16.26■□□□□ 0.19
CRTC3-210ENST00000560927 ATP1A1P05023 1023 aaKnown RBP16.26■□□□□ 0.19
CRTC3-210ENST00000560927 CTAGE8P0CG41 777 aa16.26■□□□□ 0.19
CRTC3-210ENST00000560927 MRPL12P52815 198 aaKnown RBP16.26■□□□□ 0.19
CRTC3-210ENST00000560927 KRT83P78385 493 aa16.26■□□□□ 0.19
CRTC3-210ENST00000560927 TRAPPC11Q7Z392 1133 aa16.26■□□□□ 0.19
CRTC3-210ENST00000560927 KIAA1328Q86T90 577 aa16.26■□□□□ 0.19
CRTC3-210ENST00000560927 CTAGE6Q86UF2 777 aa16.26■□□□□ 0.19
CRTC3-210ENST00000560927 CTAGE4Q8IX94 777 aa16.26■□□□□ 0.19
CRTC3-210ENST00000560927 JAKMIP2Q96AA8 810 aa16.26■□□□□ 0.19
CRTC3-210ENST00000560927 NDST4Q9H3R1 872 aa16.26■□□□□ 0.19
CRTC3-210ENST00000560927 FAM207AQ9NSI2 230 aaPredicted RBP16.26■□□□□ 0.19
CRTC3-210ENST00000560927 SIK3Q9Y2K2 1263 aa16.26■□□□□ 0.19
CRTC3-210ENST00000560927 MYH7BA7E2Y1 1941 aa16.26■□□□□ 0.19
CRTC3-210ENST00000560927 G3V3G9 751 aa16.25■□□□□ 0.19
CRTC3-210ENST00000560927 ZNF263O14978 683 aa16.25■□□□□ 0.19
CRTC3-210ENST00000560927 CYLC1P35663 651 aaPredicted RBP16.25■□□□□ 0.19
CRTC3-210ENST00000560927 BRD3Q15059 726 aa16.25■□□□□ 0.19
CRTC3-210ENST00000560927 QRICH1Q2TAL8 776 aa16.25■□□□□ 0.19
CRTC3-210ENST00000560927 FIGNQ5HY92 759 aa16.25■□□□□ 0.19
CRTC3-210ENST00000560927 DCAF8Q5TAQ9 597 aa16.25■□□□□ 0.19
CRTC3-210ENST00000560927 LRRC55Q6ZSA7 311 aa16.25■□□□□ 0.19
CRTC3-210ENST00000560927 COL23A1Q86Y22 540 aaPredicted RBP16.25■□□□□ 0.19
CRTC3-210ENST00000560927 GPIHBP1Q8IV16 184 aa16.25■□□□□ 0.19
CRTC3-210ENST00000560927 KIAA0825Q8IV33 1275 aa16.25■□□□□ 0.19
CRTC3-210ENST00000560927 DNAJC19Q96DA6 116 aa16.25■□□□□ 0.19
CRTC3-210ENST00000560927 RAB21Q9UL25 225 aa16.25■□□□□ 0.19
CRTC3-210ENST00000560927 PCDHA12Q9UN75 941 aa16.25■□□□□ 0.19
CRTC3-210ENST00000560927 ATF5Q9Y2D1 282 aaPredicted RBP16.25■□□□□ 0.19
CRTC3-210ENST00000560927 C10orf71Q711Q0 1435 aa16.25■□□□□ 0.19
CRTC3-210ENST00000560927 GREB1LQ9C091 1923 aaPredicted RBP16.25■□□□□ 0.19
CRTC3-210ENST00000560927 MYH4Q9Y623 1939 aa16.25■□□□□ 0.19
CRTC3-210ENST00000560927 A0A1W2PQJ5 194 aa16.25■□□□□ 0.19
CRTC3-210ENST00000560927 DDTLA6NHG4 134 aaPredicted RBP16.25■□□□□ 0.19
CRTC3-210ENST00000560927 EIF3CLB5ME19 914 aaKnown RBP16.25■□□□□ 0.19
CRTC3-210ENST00000560927 POLR3GO15318 223 aaPredicted RBP16.25■□□□□ 0.19
CRTC3-210ENST00000560927 SRGAP2O75044 1071 aa16.25■□□□□ 0.19
CRTC3-210ENST00000560927 KIF20AO95235 890 aa16.25■□□□□ 0.19
CRTC3-210ENST00000560927 EEF2P13639 858 aaKnown RBP16.25■□□□□ 0.19
CRTC3-210ENST00000560927 HSPA1LP34931 641 aa16.25■□□□□ 0.19
CRTC3-210ENST00000560927 KRT27Q7Z3Y8 459 aa16.25■□□□□ 0.19
CRTC3-210ENST00000560927 PKNOX2Q96KN3 472 aa16.25■□□□□ 0.19
CRTC3-210ENST00000560927 EIF3CQ99613 913 aaKnown RBP16.25■□□□□ 0.19
CRTC3-210ENST00000560927 ZCCHC17Q9NP64 241 aaKnown RBP16.25■□□□□ 0.19
CRTC3-210ENST00000560927 MARCH6O60337 910 aa16.24■□□□□ 0.19
CRTC3-210ENST00000560927 KRT26Q7Z3Y9 468 aa16.24■□□□□ 0.19
CRTC3-210ENST00000560927 CCDC170Q8IYT3 715 aa16.24■□□□□ 0.19
CRTC3-210ENST00000560927 FGFBP2Q9BYJ0 223 aa16.24■□□□□ 0.19
CRTC3-210ENST00000560927 EHD4Q9H223 541 aa16.24■□□□□ 0.19
CRTC3-210ENST00000560927 E9PMD0 336 aa16.24■□□□□ 0.19
CRTC3-210ENST00000560927 SSBP05455 408 aaKnown RBP eCLIP16.24■□□□□ 0.19
CRTC3-210ENST00000560927 COASYQ13057 564 aa16.24■□□□□ 0.19
CRTC3-210ENST00000560927 BEND6Q5SZJ8 279 aaPredicted RBP16.24■□□□□ 0.19
CRTC3-210ENST00000560927 CCDC155Q8N6L0 562 aa16.24■□□□□ 0.19
CRTC3-210ENST00000560927 SUGCTQ9HAC7 445 aa16.24■□□□□ 0.19
CRTC3-210ENST00000560927 NRXN2Q9P2S2 1712 aa16.24■□□□□ 0.19
CRTC3-210ENST00000560927 KRT86O43790 486 aa16.23■□□□□ 0.19
CRTC3-210ENST00000560927 VSNL1P62760 191 aa16.23■□□□□ 0.19
CRTC3-210ENST00000560927 LRRC63Q05C16 580 aa16.23■□□□□ 0.19
CRTC3-210ENST00000560927 SMC1AQ14683 1233 aaKnown RBP16.23■□□□□ 0.19
CRTC3-210ENST00000560927 MAN2A1Q16706 1144 aa16.23■□□□□ 0.19
CRTC3-210ENST00000560927 ZNF662Q6ZS27 426 aa16.23■□□□□ 0.19
CRTC3-210ENST00000560927 SH3BP5LQ7L8J4 393 aa16.23■□□□□ 0.19
CRTC3-210ENST00000560927 ZBTB9Q96C00 473 aa16.23■□□□□ 0.19
CRTC3-210ENST00000560927 ZDHHC15Q96MV8 337 aa16.23■□□□□ 0.19
CRTC3-210ENST00000560927 MMRN2Q9H8L6 949 aa16.23■□□□□ 0.19
CRTC3-210ENST00000560927 TBC1D7Q9P0N9 293 aa16.23■□□□□ 0.19
CRTC3-210ENST00000560927 ARHGAP20Q9P2F6 1191 aa16.23■□□□□ 0.19
CRTC3-210ENST00000560927 PCDHA1Q9Y5I3 950 aa16.23■□□□□ 0.19
CRTC3-210ENST00000560927 OAS2P29728 719 aaKnown RBP16.23■□□□□ 0.19
CRTC3-210ENST00000560927 ALDH1B1P30837 517 aa16.23■□□□□ 0.19
CRTC3-210ENST00000560927 SLC1A4P43007 532 aa16.23■□□□□ 0.19
CRTC3-210ENST00000560927 SNAP25P60880 206 aa16.23■□□□□ 0.19
CRTC3-210ENST00000560927 CACNB1Q02641 598 aaPredicted RBP16.23■□□□□ 0.19
CRTC3-210ENST00000560927 C2CD5Q86YS7 1000 aa16.23■□□□□ 0.19
CRTC3-210ENST00000560927 SIAH1Q8IUQ4 282 aa16.23■□□□□ 0.19
CRTC3-210ENST00000560927 NLGN1Q8N2Q7 840 aa16.23■□□□□ 0.19
CRTC3-210ENST00000560927 HNRNPLLQ8WVV9 542 aaKnown RBP16.23■□□□□ 0.19
CRTC3-210ENST00000560927 P2RX7Q99572 595 aaKnown RBP16.23■□□□□ 0.19
CRTC3-210ENST00000560927 ABCB6Q9NP58 842 aa16.23■□□□□ 0.19
CRTC3-210ENST00000560927 FAM198AQ9UFP1 575 aa16.23■□□□□ 0.19
CRTC3-210ENST00000560927 PLAGL2Q9UPG8 496 aa16.23■□□□□ 0.19
CRTC3-210ENST00000560927 COL11A2P13942 1736 aaPredicted RBP16.22■□□□□ 0.19
CRTC3-210ENST00000560927 SIPA1L1O43166 1804 aa16.22■□□□□ 0.19
CRTC3-210ENST00000560927 NPHP3-ACAD11A0A0J9YXS1 232 aa16.22■□□□□ 0.19
CRTC3-210ENST00000560927 MACROD2A1Z1Q3 448 aa16.22■□□□□ 0.19
CRTC3-210ENST00000560927 GCFC2P16383 781 aaKnown RBP16.22■□□□□ 0.19
CRTC3-210ENST00000560927 STAT3P40763 770 aa16.22■□□□□ 0.19
CRTC3-210ENST00000560927 CDK17Q00537 523 aa16.22■□□□□ 0.19
CRTC3-210ENST00000560927 CCDC17Q96LX7 622 aa16.22■□□□□ 0.19
CRTC3-210ENST00000560927 CCDC42Q96M95 316 aa16.22■□□□□ 0.19
CRTC3-210ENST00000560927 MMS19Q96T76 1030 aa16.22■□□□□ 0.19
CRTC3-210ENST00000560927 KIAA1024Q9UPX6 916 aa16.22■□□□□ 0.19
CRTC3-210ENST00000560927 ARFGEF1Q9Y6D6 1849 aa16.22■□□□□ 0.19
CRTC3-210ENST00000560927 POTEB3A0JP26 581 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms