RNA–Protein interactions for RNA: ENST00000560619.2

SNRPCP18-201, Transcript of small nuclear ribonucleoprotein polypeptide C pseudogene 18, humanhuman

BASIC

Gene SNRPCP18, Length 439 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPCP18-201ENST00000560619 ICAM3P32942 547 aa12.75□□□□□ -0.37
SNRPCP18-201ENST00000560619 SREBF1P36956 1147 aa12.75□□□□□ -0.37
SNRPCP18-201ENST00000560619 NLRP5P59047 1200 aa12.75□□□□□ -0.37
SNRPCP18-201ENST00000560619 TTLL4Q14679 1199 aa12.75□□□□□ -0.37
SNRPCP18-201ENST00000560619 GNPTABQ3T906 1256 aa12.75□□□□□ -0.37
SNRPCP18-201ENST00000560619 DUSP28Q4G0W2 176 aa12.75□□□□□ -0.37
SNRPCP18-201ENST00000560619 FCHSD1Q86WN1 690 aa12.75□□□□□ -0.37
SNRPCP18-201ENST00000560619 INTS4Q96HW7 963 aaKnown RBP12.75□□□□□ -0.37
SNRPCP18-201ENST00000560619 CDHR1Q96JP9 859 aa12.75□□□□□ -0.37
SNRPCP18-201ENST00000560619 INPP4AQ96PE3 977 aaPredicted RBP12.75□□□□□ -0.37
SNRPCP18-201ENST00000560619 PHF20Q9BVI0 1012 aa12.75□□□□□ -0.37
SNRPCP18-201ENST00000560619 UPF3AQ9H1J1 476 aaKnown RBP12.75□□□□□ -0.37
SNRPCP18-201ENST00000560619 VPS54Q9P1Q0 977 aa12.75□□□□□ -0.37
SNRPCP18-201ENST00000560619 ZHX1Q9UKY1 873 aaPredicted RBP12.75□□□□□ -0.37
SNRPCP18-201ENST00000560619 GNEQ9Y223 722 aaKnown RBP12.75□□□□□ -0.37
SNRPCP18-201ENST00000560619 FRMPD3Q5JV73 1810 aa12.74□□□□□ -0.37
SNRPCP18-201ENST00000560619 M0R2N6 131 aa12.74□□□□□ -0.37
SNRPCP18-201ENST00000560619 USP11P51784 963 aa12.74□□□□□ -0.37
SNRPCP18-201ENST00000560619 GJA9P57773 515 aa12.74□□□□□ -0.37
SNRPCP18-201ENST00000560619 TNFAIP2Q03169 654 aa12.74□□□□□ -0.37
SNRPCP18-201ENST00000560619 CCDC62Q6P9F0 684 aa12.74□□□□□ -0.37
SNRPCP18-201ENST00000560619 NIPA1Q7RTP0 329 aa12.74□□□□□ -0.37
SNRPCP18-201ENST00000560619 BLIDQ8IZY5 108 aa12.74□□□□□ -0.37
SNRPCP18-201ENST00000560619 CRYGNQ8WXF5 182 aa12.74□□□□□ -0.37
SNRPCP18-201ENST00000560619 EMID1Q96A84 441 aaPredicted RBP12.74□□□□□ -0.37
SNRPCP18-201ENST00000560619 SENP7Q9BQF6 1050 aa12.74□□□□□ -0.37
SNRPCP18-201ENST00000560619 TSEN34Q9BSV6 310 aaKnown RBP12.74□□□□□ -0.37
SNRPCP18-201ENST00000560619 ALG1Q9BT22 464 aa12.74□□□□□ -0.37
SNRPCP18-201ENST00000560619 ANO3Q9BYT9 981 aa12.74□□□□□ -0.37
SNRPCP18-201ENST00000560619 WDR11Q9BZH6 1224 aa12.74□□□□□ -0.37
SNRPCP18-201ENST00000560619 SPC25Q9HBM1 224 aa12.74□□□□□ -0.37
SNRPCP18-201ENST00000560619 SMC3Q9UQE7 1217 aa12.74□□□□□ -0.37
SNRPCP18-201ENST00000560619 DNM1LO00429 736 aa12.73□□□□□ -0.37
SNRPCP18-201ENST00000560619 TFRCP02786 760 aaKnown RBP12.73□□□□□ -0.37
SNRPCP18-201ENST00000560619 CIITAP33076 1130 aa12.73□□□□□ -0.37
SNRPCP18-201ENST00000560619 MRPS9P82933 396 aaKnown RBP12.73□□□□□ -0.37
SNRPCP18-201ENST00000560619 NPY5RQ15761 445 aa12.73□□□□□ -0.37
SNRPCP18-201ENST00000560619 UBE2SQ16763 222 aa12.73□□□□□ -0.37
SNRPCP18-201ENST00000560619 RNF180Q86T96 592 aa12.73□□□□□ -0.37
SNRPCP18-201ENST00000560619 NLRX1Q86UT6 975 aa12.73□□□□□ -0.37
SNRPCP18-201ENST00000560619 FBXO16Q8IX29 292 aaPredicted RBP12.73□□□□□ -0.37
SNRPCP18-201ENST00000560619 GIMAP8Q8ND71 665 aaPredicted RBP12.73□□□□□ -0.37
SNRPCP18-201ENST00000560619 KLHDC9Q8NEP7 349 aa12.73□□□□□ -0.37
SNRPCP18-201ENST00000560619 GPRASP2Q96D09 838 aa12.73□□□□□ -0.37
SNRPCP18-201ENST00000560619 SHISA4Q96DD7 197 aa12.73□□□□□ -0.37
SNRPCP18-201ENST00000560619 BRMS1Q9HCU9 246 aa12.73□□□□□ -0.37
SNRPCP18-201ENST00000560619 UBIAD1Q9Y5Z9 338 aa12.73□□□□□ -0.37
SNRPCP18-201ENST00000560619 POTEFA5A3E0 1075 aa12.72□□□□□ -0.37
SNRPCP18-201ENST00000560619 SPATA31C2B4DYI2 1134 aa12.72□□□□□ -0.37
SNRPCP18-201ENST00000560619 FIBPO43427 364 aa12.72□□□□□ -0.37
SNRPCP18-201ENST00000560619 ADAMTS4O75173 837 aa12.72□□□□□ -0.37
SNRPCP18-201ENST00000560619 RGS20O76081 388 aa12.72□□□□□ -0.37
SNRPCP18-201ENST00000560619 PDIA4P13667 645 aaKnown RBP12.72□□□□□ -0.37
SNRPCP18-201ENST00000560619 SMPD1P17405 629 aa12.72□□□□□ -0.37
SNRPCP18-201ENST00000560619 ADCYAP1R1P41586 468 aa12.72□□□□□ -0.37
SNRPCP18-201ENST00000560619 TRIM29Q14134 588 aa12.72□□□□□ -0.37
SNRPCP18-201ENST00000560619 MOXD1Q6UVY6 613 aa12.72□□□□□ -0.37
SNRPCP18-201ENST00000560619 KRT25Q7Z3Z0 450 aa12.72□□□□□ -0.37
SNRPCP18-201ENST00000560619 UBE2Q1Q7Z7E8 422 aa12.72□□□□□ -0.37
SNRPCP18-201ENST00000560619 FAM184AQ8NB25 1140 aa12.72□□□□□ -0.37
SNRPCP18-201ENST00000560619 PCSK9Q8NBP7 692 aaKnown RBP12.72□□□□□ -0.37
SNRPCP18-201ENST00000560619 FBXO18Q8NFZ0 1043 aa12.72□□□□□ -0.37
SNRPCP18-201ENST00000560619 SEZ6LQ9BYH1 1024 aa12.72□□□□□ -0.37
SNRPCP18-201ENST00000560619 XPNPEP3Q9NQH7 507 aa12.72□□□□□ -0.37
SNRPCP18-201ENST00000560619 DDX41Q9UJV9 622 aaKnown RBP12.72□□□□□ -0.37
SNRPCP18-201ENST00000560619 MOXD2PA6NHM9 499 aa12.71□□□□□ -0.37
SNRPCP18-201ENST00000560619 MEIS1O00470 390 aa12.71□□□□□ -0.37
SNRPCP18-201ENST00000560619 ZEB2O60315 1214 aa12.71□□□□□ -0.37
SNRPCP18-201ENST00000560619 JAK2O60674 1132 aa12.71□□□□□ -0.37
SNRPCP18-201ENST00000560619 KPNA6O60684 536 aa12.71□□□□□ -0.37
SNRPCP18-201ENST00000560619 MMP1P03956 469 aa12.71□□□□□ -0.37
SNRPCP18-201ENST00000560619 TXNP10599 105 aaKnown RBP12.71□□□□□ -0.37
SNRPCP18-201ENST00000560619 MYCLP12524 364 aaPredicted RBP12.71□□□□□ -0.37
SNRPCP18-201ENST00000560619 EN2P19622 333 aaPredicted RBP12.71□□□□□ -0.37
SNRPCP18-201ENST00000560619 ARHGAP4P98171 946 aa12.71□□□□□ -0.37
SNRPCP18-201ENST00000560619 LAMC2Q13753 1193 aa12.71□□□□□ -0.37
SNRPCP18-201ENST00000560619 NEDD9Q14511 834 aa12.71□□□□□ -0.37
SNRPCP18-201ENST00000560619 CEP55Q53EZ4 464 aa12.71□□□□□ -0.37
SNRPCP18-201ENST00000560619 BRDTQ58F21 947 aaPredicted RBP12.71□□□□□ -0.37
SNRPCP18-201ENST00000560619 EEPD1Q7L9B9 569 aa12.71□□□□□ -0.37
SNRPCP18-201ENST00000560619 IL31RAQ8NI17 732 aa12.71□□□□□ -0.37
SNRPCP18-201ENST00000560619 AIFM3Q96NN9 605 aa12.71□□□□□ -0.37
SNRPCP18-201ENST00000560619 NAP1L4Q99733 375 aaKnown RBP12.71□□□□□ -0.37
SNRPCP18-201ENST00000560619 MXRA8Q9BRK3 442 aa12.71□□□□□ -0.37
SNRPCP18-201ENST00000560619 AP5M1Q9H0R1 490 aa12.71□□□□□ -0.37
SNRPCP18-201ENST00000560619 JADE2Q9NQC1 790 aa12.71□□□□□ -0.37
SNRPCP18-201ENST00000560619 PDGFCQ9NRA1 345 aa12.71□□□□□ -0.37
SNRPCP18-201ENST00000560619 CENPFP49454 3210 aa12.71□□□□□ -0.38
SNRPCP18-201ENST00000560619 MYH7BA7E2Y1 1941 aa12.7□□□□□ -0.38
SNRPCP18-201ENST00000560619 SYNRGQ9UMZ2 1314 aa12.7□□□□□ -0.38
SNRPCP18-201ENST00000560619 CYP3A7-CYP3A51PA0A087WV96 503 aa12.7□□□□□ -0.38
SNRPCP18-201ENST00000560619 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.7□□□□□ -0.38
SNRPCP18-201ENST00000560619 A6NJR5 290 aa12.7□□□□□ -0.38
SNRPCP18-201ENST00000560619 PPFIA3O75145 1194 aa12.7□□□□□ -0.38
SNRPCP18-201ENST00000560619 CABYRO75952 493 aa12.7□□□□□ -0.38
SNRPCP18-201ENST00000560619 MYCP01106 439 aaPredicted RBP12.7□□□□□ -0.38
SNRPCP18-201ENST00000560619 GH1P01241 217 aa12.7□□□□□ -0.38
SNRPCP18-201ENST00000560619 COL6A1P12109 1028 aa12.7□□□□□ -0.38
SNRPCP18-201ENST00000560619 CYP3A7P24462 503 aa12.7□□□□□ -0.38
SNRPCP18-201ENST00000560619 GJB2P29033 226 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms