RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 REXO1Q8N1G1 1221 aaKnown RBP16.01■□□□□ 0.15
PKNOX1-209ENST00000560448 DAGLBQ8NCG7 672 aa16.01■□□□□ 0.15
PKNOX1-209ENST00000560448 TSEN34Q9BSV6 310 aaKnown RBP16.01■□□□□ 0.15
PKNOX1-209ENST00000560448 UPF3AQ9H1J1 476 aaKnown RBP16.01■□□□□ 0.15
PKNOX1-209ENST00000560448 ORC3Q9UBD5 711 aaPredicted RBP16.01■□□□□ 0.15
PKNOX1-209ENST00000560448 PCDHA6Q9UN73 950 aa16.01■□□□□ 0.15
PKNOX1-209ENST00000560448 GNEQ9Y223 722 aaKnown RBP16.01■□□□□ 0.15
PKNOX1-209ENST00000560448 PCDHA8Q9Y5H6 950 aa16.01■□□□□ 0.15
PKNOX1-209ENST00000560448 KBTBD13C9JR72 458 aa16■□□□□ 0.15
PKNOX1-209ENST00000560448 FARP2O94887 1054 aaPredicted RBP16■□□□□ 0.15
PKNOX1-209ENST00000560448 LARGE1O95461 756 aa16■□□□□ 0.15
PKNOX1-209ENST00000560448 NLRP5P59047 1200 aa16■□□□□ 0.15
PKNOX1-209ENST00000560448 BRDTQ58F21 947 aaPredicted RBP16■□□□□ 0.15
PKNOX1-209ENST00000560448 NOL8Q76FK4 1167 aaKnown RBP16■□□□□ 0.15
PKNOX1-209ENST00000560448 EEPD1Q7L9B9 569 aa16■□□□□ 0.15
PKNOX1-209ENST00000560448 UBE2Q1Q7Z7E8 422 aa16■□□□□ 0.15
PKNOX1-209ENST00000560448 HSCBQ8IWL3 235 aa16■□□□□ 0.15
PKNOX1-209ENST00000560448 PCSK9Q8NBP7 692 aaKnown RBP16■□□□□ 0.15
PKNOX1-209ENST00000560448 NSUN7Q8NE18 718 aaKnown RBP16■□□□□ 0.15
PKNOX1-209ENST00000560448 INPP4AQ96PE3 977 aaPredicted RBP16■□□□□ 0.15
PKNOX1-209ENST00000560448 WDR11Q9BZH6 1224 aa16■□□□□ 0.15
PKNOX1-209ENST00000560448 KIF3AQ9Y496 699 aa16■□□□□ 0.15
PKNOX1-209ENST00000560448 BRCA2P51587 3418 aa16■□□□□ 0.15
PKNOX1-209ENST00000560448 KIAA1217Q5T5P2 1943 aa15.99■□□□□ 0.15
PKNOX1-209ENST00000560448 MOXD2PA6NHM9 499 aa15.99■□□□□ 0.15
PKNOX1-209ENST00000560448 ZEB2O60315 1214 aa15.99■□□□□ 0.15
PKNOX1-209ENST00000560448 ADAMTS4O75173 837 aa15.99■□□□□ 0.15
PKNOX1-209ENST00000560448 CD2BP2O95400 341 aaKnown RBP15.99■□□□□ 0.15
PKNOX1-209ENST00000560448 CTDNEP1O95476 244 aa15.99■□□□□ 0.15
PKNOX1-209ENST00000560448 ICAM3P32942 547 aa15.99■□□□□ 0.15
PKNOX1-209ENST00000560448 ADCYAP1R1P41586 468 aa15.99■□□□□ 0.15
PKNOX1-209ENST00000560448 TLK2Q86UE8 772 aa15.99■□□□□ 0.15
PKNOX1-209ENST00000560448 NLRX1Q86UT6 975 aa15.99■□□□□ 0.15
PKNOX1-209ENST00000560448 NECAB1Q8N987 351 aa15.99■□□□□ 0.15
PKNOX1-209ENST00000560448 ANO3Q9BYT9 981 aa15.99■□□□□ 0.15
PKNOX1-209ENST00000560448 AP5M1Q9H0R1 490 aa15.99■□□□□ 0.15
PKNOX1-209ENST00000560448 VPS54Q9P1Q0 977 aa15.99■□□□□ 0.15
PKNOX1-209ENST00000560448 PCDHA4Q9UN74 947 aa15.99■□□□□ 0.15
PKNOX1-209ENST00000560448 FIBPO43427 364 aa15.98■□□□□ 0.15
PKNOX1-209ENST00000560448 TXNP10599 105 aaKnown RBP15.98■□□□□ 0.15
PKNOX1-209ENST00000560448 MYCLP12524 364 aaPredicted RBP15.98■□□□□ 0.15
PKNOX1-209ENST00000560448 SREBF1P36956 1147 aa15.98■□□□□ 0.15
PKNOX1-209ENST00000560448 GIMAP8Q8ND71 665 aaPredicted RBP15.98■□□□□ 0.15
PKNOX1-209ENST00000560448 GPRASP2Q96D09 838 aa15.98■□□□□ 0.15
PKNOX1-209ENST00000560448 HTATIP2Q9BUP3 242 aa15.98■□□□□ 0.15
PKNOX1-209ENST00000560448 SEZ6LQ9BYH1 1024 aa15.98■□□□□ 0.15
PKNOX1-209ENST00000560448 BRMS1Q9HCU9 246 aa15.98■□□□□ 0.15
PKNOX1-209ENST00000560448 SYNRGQ9UMZ2 1314 aa15.98■□□□□ 0.15
PKNOX1-209ENST00000560448 SMPD1P17405 629 aa15.97■□□□□ 0.15
PKNOX1-209ENST00000560448 CPT1AP50416 773 aa15.97■□□□□ 0.15
PKNOX1-209ENST00000560448 TRIM29Q14134 588 aa15.97■□□□□ 0.15
PKNOX1-209ENST00000560448 LRRC41Q15345 812 aa15.97■□□□□ 0.15
PKNOX1-209ENST00000560448 UBE2SQ16763 222 aa15.97■□□□□ 0.15
PKNOX1-209ENST00000560448 CCDC62Q6P9F0 684 aa15.97■□□□□ 0.15
PKNOX1-209ENST00000560448 KLHDC9Q8NEP7 349 aa15.97■□□□□ 0.15
PKNOX1-209ENST00000560448 EMID1Q96A84 441 aaPredicted RBP15.97■□□□□ 0.15
PKNOX1-209ENST00000560448 SENP7Q9BQF6 1050 aa15.97■□□□□ 0.15
PKNOX1-209ENST00000560448 ALG1Q9BT22 464 aa15.97■□□□□ 0.15
PKNOX1-209ENST00000560448 PHF20Q9BVI0 1012 aa15.97■□□□□ 0.15
PKNOX1-209ENST00000560448 C11orf49Q9H6J7 331 aa15.97■□□□□ 0.15
PKNOX1-209ENST00000560448 PDGFCQ9NRA1 345 aa15.97■□□□□ 0.15
PKNOX1-209ENST00000560448 MRVI1Q9Y6F6 885 aa15.97■□□□□ 0.15
PKNOX1-209ENST00000560448 KPNA6O60684 536 aa15.96■□□□□ 0.15
PKNOX1-209ENST00000560448 CABYRO75952 493 aa15.96■□□□□ 0.15
PKNOX1-209ENST00000560448 GH1P01241 217 aa15.96■□□□□ 0.15
PKNOX1-209ENST00000560448 CYP3A4P08684 503 aa15.96■□□□□ 0.15
PKNOX1-209ENST00000560448 COL6A1P12109 1028 aa15.96■□□□□ 0.15
PKNOX1-209ENST00000560448 MRPS9P82933 396 aaKnown RBP15.96■□□□□ 0.15
PKNOX1-209ENST00000560448 MLLT1Q03111 559 aaPredicted RBP15.96■□□□□ 0.15
PKNOX1-209ENST00000560448 NEDD9Q14511 834 aa15.96■□□□□ 0.15
PKNOX1-209ENST00000560448 SEPT14Q6ZU15 432 aa15.96■□□□□ 0.15
PKNOX1-209ENST00000560448 NIPA1Q7RTP0 329 aa15.96■□□□□ 0.15
PKNOX1-209ENST00000560448 CCDC83Q8IWF9 413 aa15.96■□□□□ 0.15
PKNOX1-209ENST00000560448 BLIDQ8IZY5 108 aa15.96■□□□□ 0.15
PKNOX1-209ENST00000560448 TMX3Q96JJ7 454 aa15.96■□□□□ 0.15
PKNOX1-209ENST00000560448 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.96■□□□□ 0.15
PKNOX1-209ENST00000560448 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.95■□□□□ 0.14
PKNOX1-209ENST00000560448 RGS20O76081 388 aa15.95■□□□□ 0.14
PKNOX1-209ENST00000560448 C6orf222P0C671 652 aaPredicted RBP15.95■□□□□ 0.14
PKNOX1-209ENST00000560448 FDPSP14324 419 aaKnown RBP15.95■□□□□ 0.14
PKNOX1-209ENST00000560448 MNX1P50219 401 aaPredicted RBP15.95■□□□□ 0.14
PKNOX1-209ENST00000560448 SETQ01105 290 aaPredicted RBP15.95■□□□□ 0.14
PKNOX1-209ENST00000560448 ST3GAL1Q11201 340 aa15.95■□□□□ 0.14
PKNOX1-209ENST00000560448 LAMC2Q13753 1193 aa15.95■□□□□ 0.14
PKNOX1-209ENST00000560448 C1orf53Q5VUE5 145 aa15.95■□□□□ 0.14
PKNOX1-209ENST00000560448 IL31RAQ8NI17 732 aa15.95■□□□□ 0.14
PKNOX1-209ENST00000560448 DDX41Q9UJV9 622 aaKnown RBP15.95■□□□□ 0.14
PKNOX1-209ENST00000560448 PHF24Q9UPV7 400 aa15.95■□□□□ 0.14
PKNOX1-209ENST00000560448 SPATA31C2B4DYI2 1134 aa15.94■□□□□ 0.14
PKNOX1-209ENST00000560448 K7ELQ4 463 aaPredicted RBP15.94■□□□□ 0.14
PKNOX1-209ENST00000560448 M0R2N6 131 aa15.94■□□□□ 0.14
PKNOX1-209ENST00000560448 DYNC1LI2O43237 492 aaPredicted RBP15.94■□□□□ 0.14
PKNOX1-209ENST00000560448 ADCY6O43306 1168 aa15.94■□□□□ 0.14
PKNOX1-209ENST00000560448 PGK1P00558 417 aa15.94■□□□□ 0.14
PKNOX1-209ENST00000560448 USP11P51784 963 aa15.94■□□□□ 0.14
PKNOX1-209ENST00000560448 ARHGAP4P98171 946 aa15.94■□□□□ 0.14
PKNOX1-209ENST00000560448 MTMR1Q13613 665 aa15.94■□□□□ 0.14
PKNOX1-209ENST00000560448 FSCN1Q16658 493 aaKnown RBP15.94■□□□□ 0.14
PKNOX1-209ENST00000560448 GNASQ5JWF2 1037 aa15.94■□□□□ 0.14
PKNOX1-209ENST00000560448 ANO1Q5XXA6 986 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms